RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 TCP11L1Q9NUJ3 509 aa21.78■■□□□ 1.08
PRPF40B-216ENST00000552301 PEX10O60683 326 aa21.77■■□□□ 1.08
PRPF40B-216ENST00000552301 KDM4AO75164 1064 aa21.77■■□□□ 1.08
PRPF40B-216ENST00000552301 MAPK4P31152 587 aa21.77■■□□□ 1.08
PRPF40B-216ENST00000552301 PRKCZQ05513 592 aa21.77■■□□□ 1.08
PRPF40B-216ENST00000552301 SLC9C1Q4G0N8 1177 aa21.77■■□□□ 1.08
PRPF40B-216ENST00000552301 CCDC178Q5BJE1 867 aa21.77■■□□□ 1.08
PRPF40B-216ENST00000552301 WDR78Q5VTH9 848 aa21.77■■□□□ 1.08
PRPF40B-216ENST00000552301 ATG4CQ96DT6 458 aa21.77■■□□□ 1.08
PRPF40B-216ENST00000552301 FBXO28Q9NVF7 368 aa21.77■■□□□ 1.08
PRPF40B-216ENST00000552301 MTMR7Q9Y216 660 aa21.77■■□□□ 1.08
PRPF40B-216ENST00000552301 RBM8AQ9Y5S9 174 aaKnown RBP21.77■■□□□ 1.08
PRPF40B-216ENST00000552301 TOP1P11387 765 aaKnown RBP21.76■■□□□ 1.07
PRPF40B-216ENST00000552301 SLC1A4P43007 532 aa21.76■■□□□ 1.07
PRPF40B-216ENST00000552301 PLS1Q14651 629 aa21.76■■□□□ 1.07
PRPF40B-216ENST00000552301 RALYLQ86SE5 291 aaKnown RBP21.76■■□□□ 1.07
PRPF40B-216ENST00000552301 MAP4K1Q92918 833 aa21.76■■□□□ 1.07
PRPF40B-216ENST00000552301 SLF1Q9BQI6 1058 aa21.76■■□□□ 1.07
PRPF40B-216ENST00000552301 PPP1R9AQ9ULJ8 1098 aa21.76■■□□□ 1.07
PRPF40B-216ENST00000552301 CTDP1Q9Y5B0 961 aaPredicted RBP21.76■■□□□ 1.07
PRPF40B-216ENST00000552301 CNMDO75829 334 aa21.75■■□□□ 1.07
PRPF40B-216ENST00000552301 CYP21A2P08686 494 aa21.75■■□□□ 1.07
PRPF40B-216ENST00000552301 BMP3P12645 472 aa21.75■■□□□ 1.07
PRPF40B-216ENST00000552301 IKQ13123 557 aaPredicted RBP21.75■■□□□ 1.07
PRPF40B-216ENST00000552301 Q3C1V9 767 aa21.75■■□□□ 1.07
PRPF40B-216ENST00000552301 NBPF11Q86T75 865 aa21.75■■□□□ 1.07
PRPF40B-216ENST00000552301 UBAC1Q9BSL1 405 aa21.75■■□□□ 1.07
PRPF40B-216ENST00000552301 BTBD7Q9P203 1132 aa21.75■■□□□ 1.07
PRPF40B-216ENST00000552301 FLT3LGP49771 235 aa21.74■■□□□ 1.07
PRPF40B-216ENST00000552301 CCDC96Q2M329 555 aa21.74■■□□□ 1.07
PRPF40B-216ENST00000552301 SOCS4Q8WXH5 440 aa21.74■■□□□ 1.07
PRPF40B-216ENST00000552301 GMCL1Q96IK5 515 aa21.74■■□□□ 1.07
PRPF40B-216ENST00000552301 TTC14Q96N46 770 aa21.74■■□□□ 1.07
PRPF40B-216ENST00000552301 ZKSCAN3Q9BRR0 538 aa21.74■■□□□ 1.07
PRPF40B-216ENST00000552301 LSG1Q9H089 658 aaKnown RBP21.74■■□□□ 1.07
PRPF40B-216ENST00000552301 PORCNQ9H237 461 aa21.74■■□□□ 1.07
PRPF40B-216ENST00000552301 FEM1BQ9UK73 627 aa21.74■■□□□ 1.07
PRPF40B-216ENST00000552301 IVNS1ABPQ9Y6Y0 642 aa21.74■■□□□ 1.07
PRPF40B-216ENST00000552301 RLFQ13129 1914 aa21.74■■□□□ 1.07
PRPF40B-216ENST00000552301 A0A0G2JMZ2 1700 aa21.74■■□□□ 1.07
PRPF40B-216ENST00000552301 PARP14Q460N5 1801 aa21.73■■□□□ 1.07
PRPF40B-216ENST00000552301 MCCP23508 829 aa21.73■■□□□ 1.07
PRPF40B-216ENST00000552301 NOVP48745 357 aa21.73■■□□□ 1.07
PRPF40B-216ENST00000552301 POTEEQ6S8J3 1075 aa21.73■■□□□ 1.07
PRPF40B-216ENST00000552301 PLEKHH3Q7Z736 793 aa21.73■■□□□ 1.07
PRPF40B-216ENST00000552301 PRPF38AQ8NAV1 312 aaKnown RBP21.73■■□□□ 1.07
PRPF40B-216ENST00000552301 CHMP4CQ96CF2 233 aa21.73■■□□□ 1.07
PRPF40B-216ENST00000552301 TMEM47Q9BQJ4 181 aa21.73■■□□□ 1.07
PRPF40B-216ENST00000552301 SPATC1LQ9H0A9 340 aa21.73■■□□□ 1.07
PRPF40B-216ENST00000552301 GABRQQ9UN88 632 aa21.73■■□□□ 1.07
PRPF40B-216ENST00000552301 DOCK3Q8IZD9 2030 aa21.73■■□□□ 1.07
PRPF40B-216ENST00000552301 STAT2P52630 851 aa21.72■■□□□ 1.07
PRPF40B-216ENST00000552301 GPR142Q7Z601 462 aa21.72■■□□□ 1.07
PRPF40B-216ENST00000552301 FAM160B2Q86V87 743 aa21.72■■□□□ 1.07
PRPF40B-216ENST00000552301 DGKHQ86XP1 1220 aa21.72■■□□□ 1.07
PRPF40B-216ENST00000552301 NCOA7Q8NI08 942 aa21.72■■□□□ 1.07
PRPF40B-216ENST00000552301 CHURC1Q8WUH1 139 aa21.72■■□□□ 1.07
PRPF40B-216ENST00000552301 DCAF4Q8WV16 495 aa21.72■■□□□ 1.07
PRPF40B-216ENST00000552301 KIFC2Q96AC6 838 aa21.72■■□□□ 1.07
PRPF40B-216ENST00000552301 ZSCAN10Q96SZ4 725 aaPredicted RBP21.72■■□□□ 1.07
PRPF40B-216ENST00000552301 NUDT12Q9BQG2 462 aa21.72■■□□□ 1.07
PRPF40B-216ENST00000552301 ZSWIM5Q9P217 1185 aa21.72■■□□□ 1.07
PRPF40B-216ENST00000552301 BIN2Q9UBW5 565 aaPredicted RBP21.72■■□□□ 1.07
PRPF40B-216ENST00000552301 TMEM232C9JQI7 657 aa21.71■■□□□ 1.07
PRPF40B-216ENST00000552301 VWA5AO00534 786 aa21.71■■□□□ 1.07
PRPF40B-216ENST00000552301 GRK4P32298 578 aa21.71■■□□□ 1.07
PRPF40B-216ENST00000552301 IRF5Q13568 498 aa21.71■■□□□ 1.07
PRPF40B-216ENST00000552301 RNF20Q5VTR2 975 aa21.71■■□□□ 1.07
PRPF40B-216ENST00000552301 SLAIN1Q8ND83 568 aa21.71■■□□□ 1.07
PRPF40B-216ENST00000552301 ARMC5Q96C12 935 aa21.71■■□□□ 1.07
PRPF40B-216ENST00000552301 MOV10L1Q9BXT6 1211 aaKnown RBP21.71■■□□□ 1.07
PRPF40B-216ENST00000552301 E7EWF7 191 aa21.7■■□□□ 1.06
PRPF40B-216ENST00000552301 ADCY3O60266 1144 aa21.7■■□□□ 1.06
PRPF40B-216ENST00000552301 ZBED4O75132 1171 aa21.7■■□□□ 1.06
PRPF40B-216ENST00000552301 RCSD1Q6JBY9 416 aa21.7■■□□□ 1.06
PRPF40B-216ENST00000552301 KCTD1Q719H9 257 aa21.7■■□□□ 1.06
PRPF40B-216ENST00000552301 NCAPG2Q86XI2 1143 aa21.7■■□□□ 1.06
PRPF40B-216ENST00000552301 SHCBP1Q8NEM2 672 aa21.7■■□□□ 1.06
PRPF40B-216ENST00000552301 NKX2-3Q8TAU0 364 aa21.7■■□□□ 1.06
PRPF40B-216ENST00000552301 SH3TC2Q8TF17 1288 aa21.7■■□□□ 1.06
PRPF40B-216ENST00000552301 KAT14Q9H8E8 782 aa21.7■■□□□ 1.06
PRPF40B-216ENST00000552301 ADAMTS5Q9UNA0 930 aa21.7■■□□□ 1.06
PRPF40B-216ENST00000552301 TNKSO95271 1327 aa21.7■■□□□ 1.06
PRPF40B-216ENST00000552301 ERICH2A1L162 156 aa21.69■■□□□ 1.06
PRPF40B-216ENST00000552301 SLC25A27O95847 323 aa21.69■■□□□ 1.06
PRPF40B-216ENST00000552301 COPB2P35606 906 aa21.69■■□□□ 1.06
PRPF40B-216ENST00000552301 TMEM132BQ14DG7 1078 aa21.69■■□□□ 1.06
PRPF40B-216ENST00000552301 SART3Q15020 963 aaKnown RBP21.69■■□□□ 1.06
PRPF40B-216ENST00000552301 MROH8Q9H579 483 aa21.69■■□□□ 1.06
PRPF40B-216ENST00000552301 COL11A1P12107 1806 aaPredicted RBP21.69■■□□□ 1.06
PRPF40B-216ENST00000552301 SLC27A2O14975 620 aa21.68■■□□□ 1.06
PRPF40B-216ENST00000552301 FDX1P10109 184 aa21.68■■□□□ 1.06
PRPF40B-216ENST00000552301 ERCC3P19447 782 aa21.68■■□□□ 1.06
PRPF40B-216ENST00000552301 CYP2B6P20813 491 aa21.68■■□□□ 1.06
PRPF40B-216ENST00000552301 STAT3P40763 770 aa21.68■■□□□ 1.06
PRPF40B-216ENST00000552301 RGS2P41220 211 aa21.68■■□□□ 1.06
PRPF40B-216ENST00000552301 UBXN2AP68543 259 aa21.68■■□□□ 1.06
PRPF40B-216ENST00000552301 IFIT1BQ5T764 474 aaKnown RBP21.68■■□□□ 1.06
PRPF40B-216ENST00000552301 CREB3L3Q68CJ9 461 aa21.68■■□□□ 1.06
PRPF40B-216ENST00000552301 ENAHQ8N8S7 591 aaPredicted RBP21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms