RNA–Protein interactions for RNA: ENST00000550811.1

TUBA1A-208, Transcript of tubulin alpha 1a, human

TSL 4

Gene TUBA1A, Length 650 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBA1A-208	ENST00000550811	ZKSCAN3	Q9BRR0	538 aa		11.17	□□□□□ -0.62
TUBA1A-208	ENST00000550811	LRRC2	Q9BYS8	371 aa		11.17	□□□□□ -0.62
TUBA1A-208	ENST00000550811	PICK1	Q9NRD5	415 aa		11.17	□□□□□ -0.62
TUBA1A-208	ENST00000550811	PDRG1	Q9NUG6	133 aa		11.17	□□□□□ -0.62
TUBA1A-208	ENST00000550811	TTLL1	O95922	423 aa		11.16	□□□□□ -0.62
TUBA1A-208	ENST00000550811	JAG1	P78504	1218 aa		11.16	□□□□□ -0.62
TUBA1A-208	ENST00000550811	MMRN1	Q13201	1228 aa		11.16	□□□□□ -0.62
TUBA1A-208	ENST00000550811	WTAP	Q15007	396 aa		11.16	□□□□□ -0.62
TUBA1A-208	ENST00000550811	IFIT1B	Q5T764	474 aa	Known RBP	11.16	□□□□□ -0.62
TUBA1A-208	ENST00000550811	MYSM1	Q5VVJ2	828 aa		11.16	□□□□□ -0.62
TUBA1A-208	ENST00000550811		Q6ZUG5	572 aa		11.16	□□□□□ -0.62
TUBA1A-208	ENST00000550811	MOB2	Q70IA6	237 aa		11.16	□□□□□ -0.62
TUBA1A-208	ENST00000550811	METTL3	Q86U44	580 aa	Known RBP	11.16	□□□□□ -0.62
TUBA1A-208	ENST00000550811	CLEC10A	Q8IUN9	316 aa		11.16	□□□□□ -0.62
TUBA1A-208	ENST00000550811	ANKRD13A	Q8IZ07	590 aa		11.16	□□□□□ -0.62
TUBA1A-208	ENST00000550811	C2orf69	Q8N8R5	385 aa		11.16	□□□□□ -0.62
TUBA1A-208	ENST00000550811	ENAH	Q8N8S7	591 aa	Predicted RBP	11.16	□□□□□ -0.62
TUBA1A-208	ENST00000550811	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.16	□□□□□ -0.62
TUBA1A-208	ENST00000550811	ZKSCAN4	Q969J2	545 aa	Predicted RBP	11.16	□□□□□ -0.62
TUBA1A-208	ENST00000550811	TTC14	Q96N46	770 aa		11.16	□□□□□ -0.62
TUBA1A-208	ENST00000550811	KANSL2	Q9H9L4	492 aa		11.16	□□□□□ -0.62
TUBA1A-208	ENST00000550811	IL17RB	Q9NRM6	502 aa		11.16	□□□□□ -0.62
TUBA1A-208	ENST00000550811	STX8	Q9UNK0	236 aa		11.16	□□□□□ -0.62
TUBA1A-208	ENST00000550811	PTPRF	P10586	1907 aa		11.15	□□□□□ -0.62
TUBA1A-208	ENST00000550811	UNCX	A6NJT0	531 aa		11.15	□□□□□ -0.62
TUBA1A-208	ENST00000550811	GUCY1A2	P33402	732 aa		11.15	□□□□□ -0.62
TUBA1A-208	ENST00000550811	LIFR	P42702	1097 aa		11.15	□□□□□ -0.62
TUBA1A-208	ENST00000550811	ANKRD1	Q15327	319 aa		11.15	□□□□□ -0.62
TUBA1A-208	ENST00000550811	SEC23A	Q15436	765 aa		11.15	□□□□□ -0.62
TUBA1A-208	ENST00000550811	TMEM92	Q6UXU6	159 aa		11.15	□□□□□ -0.62
TUBA1A-208	ENST00000550811	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	11.15	□□□□□ -0.62
TUBA1A-208	ENST00000550811	DGKH	Q86XP1	1220 aa		11.15	□□□□□ -0.62
TUBA1A-208	ENST00000550811	FBXL16	Q8N461	479 aa		11.15	□□□□□ -0.62
TUBA1A-208	ENST00000550811	IGDCC4	Q8TDY8	1250 aa		11.15	□□□□□ -0.62
TUBA1A-208	ENST00000550811	AGXT2	Q9BYV1	514 aa		11.15	□□□□□ -0.62
TUBA1A-208	ENST00000550811	CDHR5	Q9HBB8	845 aa		11.15	□□□□□ -0.62
TUBA1A-208	ENST00000550811	LY9	Q9HBG7	655 aa		11.15	□□□□□ -0.62
TUBA1A-208	ENST00000550811	ARHGEF10L	Q9HCE6	1279 aa		11.15	□□□□□ -0.62
TUBA1A-208	ENST00000550811	MTMR4	Q9NYA4	1195 aa		11.15	□□□□□ -0.62
TUBA1A-208	ENST00000550811	RBM27	Q9P2N5	1060 aa	Known RBP	11.15	□□□□□ -0.62
TUBA1A-208	ENST00000550811	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	11.15	□□□□□ -0.62
TUBA1A-208	ENST00000550811	SNCAIP	Q9Y6H5	919 aa		11.15	□□□□□ -0.62
TUBA1A-208	ENST00000550811	CCDC69	A6NI79	296 aa		11.14	□□□□□ -0.63
TUBA1A-208	ENST00000550811	USP17L5	A8MUK1	530 aa		11.14	□□□□□ -0.63
TUBA1A-208	ENST00000550811	TOP1	P11387	765 aa	Known RBP	11.14	□□□□□ -0.63
TUBA1A-208	ENST00000550811	PTPRA	P18433	802 aa		11.14	□□□□□ -0.63
TUBA1A-208	ENST00000550811	NOV	P48745	357 aa		11.14	□□□□□ -0.63
TUBA1A-208	ENST00000550811	AK2	P54819	239 aa		11.14	□□□□□ -0.63
TUBA1A-208	ENST00000550811	ATP2B2	Q01814	1243 aa		11.14	□□□□□ -0.63
TUBA1A-208	ENST00000550811	TOB2	Q14106	344 aa	Predicted RBP	11.14	□□□□□ -0.63
TUBA1A-208	ENST00000550811	LDLRAD1	Q5T700	205 aa		11.14	□□□□□ -0.63
TUBA1A-208	ENST00000550811	CST9	Q5W186	159 aa		11.14	□□□□□ -0.63
TUBA1A-208	ENST00000550811	RCSD1	Q6JBY9	416 aa		11.14	□□□□□ -0.63
TUBA1A-208	ENST00000550811	NFXL1	Q6ZNB6	911 aa		11.14	□□□□□ -0.63
TUBA1A-208	ENST00000550811	BRF1	Q92994	677 aa		11.14	□□□□□ -0.63
TUBA1A-208	ENST00000550811	TBC1D2	Q9BYX2	928 aa		11.14	□□□□□ -0.63
TUBA1A-208	ENST00000550811	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	11.14	□□□□□ -0.63
TUBA1A-208	ENST00000550811	SH2D4A	Q9H788	454 aa		11.14	□□□□□ -0.63
TUBA1A-208	ENST00000550811	KAT14	Q9H8E8	782 aa		11.14	□□□□□ -0.63
TUBA1A-208	ENST00000550811	AS3MT	Q9HBK9	375 aa		11.14	□□□□□ -0.63
TUBA1A-208	ENST00000550811	NYAP2	Q9P242	653 aa		11.14	□□□□□ -0.63
TUBA1A-208	ENST00000550811	LOC285556	D6RIA3	1793 aa		11.13	□□□□□ -0.63
TUBA1A-208	ENST00000550811	UBE2Q2L	H0YL09	131 aa		11.13	□□□□□ -0.63
TUBA1A-208	ENST00000550811	EEF2	P13639	858 aa	Known RBP	11.13	□□□□□ -0.63
TUBA1A-208	ENST00000550811	TUSC1	Q2TAM9	212 aa		11.13	□□□□□ -0.63
TUBA1A-208	ENST00000550811	NOL8	Q76FK4	1167 aa	Known RBP	11.13	□□□□□ -0.63
TUBA1A-208	ENST00000550811	CCDC84	Q86UT8	332 aa	Predicted RBP	11.13	□□□□□ -0.63
TUBA1A-208	ENST00000550811	SGMS1	Q86VZ5	419 aa		11.13	□□□□□ -0.63
TUBA1A-208	ENST00000550811	LRRC47	Q8N1G4	583 aa	Known RBP	11.13	□□□□□ -0.63
TUBA1A-208	ENST00000550811	TMTC2	Q8N394	836 aa		11.13	□□□□□ -0.63
TUBA1A-208	ENST00000550811	ANKS1A	Q92625	1134 aa		11.13	□□□□□ -0.63
TUBA1A-208	ENST00000550811	CLMN	Q96JQ2	1002 aa		11.13	□□□□□ -0.63
TUBA1A-208	ENST00000550811	PHOX2B	Q99453	314 aa		11.13	□□□□□ -0.63
TUBA1A-208	ENST00000550811	FEZ1	Q99689	392 aa		11.13	□□□□□ -0.63
TUBA1A-208	ENST00000550811	TMEM47	Q9BQJ4	181 aa		11.13	□□□□□ -0.63
TUBA1A-208	ENST00000550811	ELP3	Q9H9T3	547 aa		11.13	□□□□□ -0.63
TUBA1A-208	ENST00000550811	SENP2	Q9HC62	589 aa		11.13	□□□□□ -0.63
TUBA1A-208	ENST00000550811	CLIP2	Q9UDT6	1046 aa		11.13	□□□□□ -0.63
TUBA1A-208	ENST00000550811	SYNPO2	Q9UMS6	1093 aa		11.13	□□□□□ -0.63
TUBA1A-208	ENST00000550811	KLF18	A0A0U1RQI7	1052 aa		11.12	□□□□□ -0.63
TUBA1A-208	ENST00000550811	TMEM88B	A6NKF7	163 aa		11.12	□□□□□ -0.63
TUBA1A-208	ENST00000550811	GOLGA8B	A8MQT2	603 aa		11.12	□□□□□ -0.63
TUBA1A-208	ENST00000550811	DDAH1	O94760	285 aa		11.12	□□□□□ -0.63
TUBA1A-208	ENST00000550811	CD2BP2	O95400	341 aa	Known RBP	11.12	□□□□□ -0.63
TUBA1A-208	ENST00000550811	RFC5	P40937	340 aa		11.12	□□□□□ -0.63
TUBA1A-208	ENST00000550811	MCM2	P49736	904 aa		11.12	□□□□□ -0.63
TUBA1A-208	ENST00000550811	HUNK	P57058	714 aa		11.12	□□□□□ -0.63
TUBA1A-208	ENST00000550811	APOBR	Q0VD83	1088 aa		11.12	□□□□□ -0.63
TUBA1A-208	ENST00000550811	PPP2R2D	Q66LE6	453 aa		11.12	□□□□□ -0.63
TUBA1A-208	ENST00000550811	APOA5	Q6Q788	366 aa		11.12	□□□□□ -0.63
TUBA1A-208	ENST00000550811	CATIP	Q7Z7H3	387 aa		11.12	□□□□□ -0.63
TUBA1A-208	ENST00000550811	ERO1B	Q86YB8	467 aa		11.12	□□□□□ -0.63
TUBA1A-208	ENST00000550811	ZNF654	Q8IZM8	581 aa		11.12	□□□□□ -0.63
TUBA1A-208	ENST00000550811	ZNF280C	Q8ND82	737 aa		11.12	□□□□□ -0.63
TUBA1A-208	ENST00000550811	PNMA1	Q8ND90	353 aa		11.12	□□□□□ -0.63
TUBA1A-208	ENST00000550811	POM121	Q96HA1	1249 aa		11.12	□□□□□ -0.63
TUBA1A-208	ENST00000550811	NAP1L2	Q9ULW6	460 aa	Predicted RBP	11.12	□□□□□ -0.63
TUBA1A-208	ENST00000550811	SLC12A7	Q9Y666	1083 aa		11.12	□□□□□ -0.63
TUBA1A-208	ENST00000550811	ZHX2	Q9Y6X8	837 aa		11.12	□□□□□ -0.63
TUBA1A-208	ENST00000550811	TRIM75P	A6NK02	468 aa		11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms