RNA–Protein interactions for RNA: ENST00000548296.1

RPAP3-206, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 3

Gene RPAP3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-206ENST00000548296 FAM13CQ8NE31 585 aa6.53□□□□□ -1.36
RPAP3-206ENST00000548296 DHX38Q92620 1227 aaKnown RBP6.53□□□□□ -1.36
RPAP3-206ENST00000548296 Q96M66 194 aa6.53□□□□□ -1.36
RPAP3-206ENST00000548296 ADAMTS10Q9H324 1103 aa6.53□□□□□ -1.36
RPAP3-206ENST00000548296 DUSP13Q9UII6 198 aa6.53□□□□□ -1.36
RPAP3-206ENST00000548296 EFR3BQ9Y2G0 817 aa6.53□□□□□ -1.36
RPAP3-206ENST00000548296 C1QTNF9P0C862 333 aa6.52□□□□□ -1.37
RPAP3-206ENST00000548296 SRFP11831 508 aa6.52□□□□□ -1.37
RPAP3-206ENST00000548296 CWF19L2Q2TBE0 894 aaKnown RBP6.52□□□□□ -1.37
RPAP3-206ENST00000548296 REC114Q7Z4M0 266 aa6.52□□□□□ -1.37
RPAP3-206ENST00000548296 TSPYL5Q86VY4 417 aaPredicted RBP6.52□□□□□ -1.37
RPAP3-206ENST00000548296 LILRA2Q8N149 483 aa6.52□□□□□ -1.37
RPAP3-206ENST00000548296 REXO1Q8N1G1 1221 aaKnown RBP6.52□□□□□ -1.37
RPAP3-206ENST00000548296 PDZD8Q8NEN9 1154 aa6.52□□□□□ -1.37
RPAP3-206ENST00000548296 SLC26A8Q96RN1 970 aa6.52□□□□□ -1.37
RPAP3-206ENST00000548296 STK10O94804 968 aaKnown RBP6.51□□□□□ -1.37
RPAP3-206ENST00000548296 SSBP05455 408 aaKnown RBP eCLIP6.51□□□□□ -1.37
RPAP3-206ENST00000548296 NBPF6Q5VWK0 638 aa6.51□□□□□ -1.37
RPAP3-206ENST00000548296 SLFN12Q8IYM2 578 aa6.51□□□□□ -1.37
RPAP3-206ENST00000548296 DTWD2Q8NBA8 298 aa6.51□□□□□ -1.37
RPAP3-206ENST00000548296 PPP1R13LQ8WUF5 828 aa6.51□□□□□ -1.37
RPAP3-206ENST00000548296 RNF141Q8WVD5 230 aa6.51□□□□□ -1.37
RPAP3-206ENST00000548296 NBPF4Q96M43 638 aa6.51□□□□□ -1.37
RPAP3-206ENST00000548296 FITM1A5D6W6 292 aa6.5□□□□□ -1.37
RPAP3-206ENST00000548296 MED14OSP0DP75 135 aa6.5□□□□□ -1.37
RPAP3-206ENST00000548296 GLDCP23378 1020 aa6.5□□□□□ -1.37
RPAP3-206ENST00000548296 ZNF165P49910 485 aa6.5□□□□□ -1.37
RPAP3-206ENST00000548296 EGR3Q06889 387 aa6.5□□□□□ -1.37
RPAP3-206ENST00000548296 SEZ6Q53EL9 994 aa6.5□□□□□ -1.37
RPAP3-206ENST00000548296 DPH6Q7L8W6 267 aa6.5□□□□□ -1.37
RPAP3-206ENST00000548296 SPPL2CQ8IUH8 684 aa6.5□□□□□ -1.37
RPAP3-206ENST00000548296 FBXO27Q8NI29 283 aa6.5□□□□□ -1.37
RPAP3-206ENST00000548296 KCNN1Q92952 543 aa6.5□□□□□ -1.37
RPAP3-206ENST00000548296 DNAJC2Q99543 621 aaKnown RBP6.5□□□□□ -1.37
RPAP3-206ENST00000548296 PRR36Q9H6K5 1346 aa6.5□□□□□ -1.37
RPAP3-206ENST00000548296 TCAF2A6NFQ2 919 aa6.49□□□□□ -1.37
RPAP3-206ENST00000548296 UPK3BL1B0FP48 263 aa6.49□□□□□ -1.37
RPAP3-206ENST00000548296 UPK3BL2E5RIL1 263 aa6.49□□□□□ -1.37
RPAP3-206ENST00000548296 KRT1P04264 644 aa6.49□□□□□ -1.37
RPAP3-206ENST00000548296 ZSCAN22P10073 491 aaPredicted RBP6.49□□□□□ -1.37
RPAP3-206ENST00000548296 LTKP29376 864 aa6.49□□□□□ -1.37
RPAP3-206ENST00000548296 ERVFC1P60507 584 aa6.49□□□□□ -1.37
RPAP3-206ENST00000548296 AMIGO3Q86WK7 504 aa6.49□□□□□ -1.37
RPAP3-206ENST00000548296 C1QL4Q86Z23 238 aa6.49□□□□□ -1.37
RPAP3-206ENST00000548296 CCDC74BQ96LY2 380 aa6.49□□□□□ -1.37
RPAP3-206ENST00000548296 ASPNQ9BXN1 380 aa6.49□□□□□ -1.37
RPAP3-206ENST00000548296 SRRTQ9BXP5 876 aaKnown RBP6.49□□□□□ -1.37
RPAP3-206ENST00000548296 LNPKQ9C0E8 428 aa6.49□□□□□ -1.37
RPAP3-206ENST00000548296 ZNF408Q9H9D4 720 aa6.49□□□□□ -1.37
RPAP3-206ENST00000548296 CWC22Q9HCG8 908 aaKnown RBP6.49□□□□□ -1.37
RPAP3-206ENST00000548296 CORINQ9Y5Q5 1042 aa6.49□□□□□ -1.37
RPAP3-206ENST00000548296 WASH4PA8MWX3 477 aa6.48□□□□□ -1.37
RPAP3-206ENST00000548296 TLR3O15455 904 aaKnown RBP6.48□□□□□ -1.37
RPAP3-206ENST00000548296 ATE1O95260 518 aa6.48□□□□□ -1.37
RPAP3-206ENST00000548296 IMPDH2P12268 514 aa6.48□□□□□ -1.37
RPAP3-206ENST00000548296 CHMP4BP1P59074 171 aa6.48□□□□□ -1.37
RPAP3-206ENST00000548296 CHRNEQ04844 493 aa6.48□□□□□ -1.37
RPAP3-206ENST00000548296 DUSP4Q13115 394 aa6.48□□□□□ -1.37
RPAP3-206ENST00000548296 MLECQ14165 292 aa6.48□□□□□ -1.37
RPAP3-206ENST00000548296 SNX17Q15036 470 aa6.48□□□□□ -1.37
RPAP3-206ENST00000548296 NR0B2Q15466 257 aa6.48□□□□□ -1.37
RPAP3-206ENST00000548296 KCNA10Q16322 511 aa6.48□□□□□ -1.37
RPAP3-206ENST00000548296 CIAPIN1Q6FI81 312 aa6.48□□□□□ -1.37
RPAP3-206ENST00000548296 ATG14Q6ZNE5 492 aa6.48□□□□□ -1.37
RPAP3-206ENST00000548296 CKAP2LQ8IYA6 745 aa6.48□□□□□ -1.37
RPAP3-206ENST00000548296 RBBP8NLQ8NC74 664 aaPredicted RBP6.48□□□□□ -1.37
RPAP3-206ENST00000548296 SHDQ96IW2 340 aa6.48□□□□□ -1.37
RPAP3-206ENST00000548296 SLC6A17Q9H1V8 727 aa6.48□□□□□ -1.37
RPAP3-206ENST00000548296 EHMT1Q9H9B1 1298 aa6.48□□□□□ -1.37
RPAP3-206ENST00000548296 CD320Q9NPF0 282 aa6.48□□□□□ -1.37
RPAP3-206ENST00000548296 ZNRF3Q9ULT6 936 aa6.48□□□□□ -1.37
RPAP3-206ENST00000548296 NPIPB6E9PJ23 425 aa6.47□□□□□ -1.37
RPAP3-206ENST00000548296 ZGLP1P0C6A0 271 aa6.47□□□□□ -1.37
RPAP3-206ENST00000548296 IRF2BP1Q8IU81 584 aa6.47□□□□□ -1.37
RPAP3-206ENST00000548296 OR6P1Q8NGX9 317 aa6.47□□□□□ -1.37
RPAP3-206ENST00000548296 ASCC2Q9H1I8 757 aaPredicted RBP6.47□□□□□ -1.37
RPAP3-206ENST00000548296 BRMS1Q9HCU9 246 aa6.47□□□□□ -1.37
RPAP3-206ENST00000548296 POLR3KQ9Y2Y1 108 aaPredicted RBP6.47□□□□□ -1.37
RPAP3-206ENST00000548296 ETV2O00321 342 aaPredicted RBP6.46□□□□□ -1.38
RPAP3-206ENST00000548296 GIPRP48546 466 aa6.46□□□□□ -1.38
RPAP3-206ENST00000548296 CLEC16AQ2KHT3 1053 aa6.46□□□□□ -1.38
RPAP3-206ENST00000548296 LCNL1Q6ZST4 164 aa6.46□□□□□ -1.38
RPAP3-206ENST00000548296 ENOX1Q8TC92 643 aaKnown RBP6.46□□□□□ -1.38
RPAP3-206ENST00000548296 CPLX3Q8WVH0 158 aa6.46□□□□□ -1.38
RPAP3-206ENST00000548296 KREMEN1Q96MU8 473 aa6.46□□□□□ -1.38
RPAP3-206ENST00000548296 RNF32Q9H0A6 362 aa6.46□□□□□ -1.38
RPAP3-206ENST00000548296 REV1Q9UBZ9 1251 aa6.46□□□□□ -1.38
RPAP3-206ENST00000548296 PRKAG3Q9UGI9 489 aa6.46□□□□□ -1.38
RPAP3-206ENST00000548296 RAPGEFL1Q9UHV5 662 aa6.46□□□□□ -1.38
RPAP3-206ENST00000548296 PPT2Q9UMR5 302 aa6.46□□□□□ -1.38
RPAP3-206ENST00000548296 PCDHA11Q9Y5I1 949 aa6.46□□□□□ -1.38
RPAP3-206ENST00000548296 MEIS3P2A8K0S8 358 aa6.45□□□□□ -1.38
RPAP3-206ENST00000548296 KLF4O43474 513 aa6.45□□□□□ -1.38
RPAP3-206ENST00000548296 HTR3BO95264 441 aa6.45□□□□□ -1.38
RPAP3-206ENST00000548296 MCM4P33991 863 aa6.45□□□□□ -1.38
RPAP3-206ENST00000548296 ETFBP38117 255 aa6.45□□□□□ -1.38
RPAP3-206ENST00000548296 EIF6P56537 245 aaKnown RBP6.45□□□□□ -1.38
RPAP3-206ENST00000548296 CLCQ05315 142 aa6.45□□□□□ -1.38
RPAP3-206ENST00000548296 SERINC3Q13530 473 aa6.45□□□□□ -1.38
RPAP3-206ENST00000548296 TNNI3KQ59H18 835 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms