RNA–Protein interactions for RNA: ENST00000548130.5

SMARCC2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 5

Gene SMARCC2, Length 1,238 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-205ENST00000548130 HERVK_113P62684 666 aa10.52□□□□□ -0.73
SMARCC2-205ENST00000548130 IMMTQ16891 758 aaKnown RBP10.52□□□□□ -0.73
SMARCC2-205ENST00000548130 CATSPERGQ6ZRH7 1159 aa10.52□□□□□ -0.73
SMARCC2-205ENST00000548130 MFSD6Q6ZSS7 791 aa10.52□□□□□ -0.73
SMARCC2-205ENST00000548130 OTOP1Q7RTM1 612 aa10.52□□□□□ -0.73
SMARCC2-205ENST00000548130 LRRC47Q8N1G4 583 aaKnown RBP10.52□□□□□ -0.73
SMARCC2-205ENST00000548130 STAG1Q8WVM7 1258 aa10.52□□□□□ -0.73
SMARCC2-205ENST00000548130 ESYT1Q9BSJ8 1104 aa10.52□□□□□ -0.73
SMARCC2-205ENST00000548130 RNF41Q9H4P4 317 aaPredicted RBP10.52□□□□□ -0.73
SMARCC2-205ENST00000548130 EFCC1Q9HA90 598 aa10.52□□□□□ -0.73
SMARCC2-205ENST00000548130 NYAP2Q9P242 653 aa10.52□□□□□ -0.73
SMARCC2-205ENST00000548130 PTPRFP10586 1907 aa10.52□□□□□ -0.73
SMARCC2-205ENST00000548130 NEDD4P46934 1319 aa10.52□□□□□ -0.73
SMARCC2-205ENST00000548130 PLIN4Q96Q06 1357 aa10.52□□□□□ -0.73
SMARCC2-205ENST00000548130 CDC45O75419 566 aa10.51□□□□□ -0.73
SMARCC2-205ENST00000548130 FMNL1O95466 1100 aaPredicted RBP10.51□□□□□ -0.73
SMARCC2-205ENST00000548130 TTLL1O95922 423 aa10.51□□□□□ -0.73
SMARCC2-205ENST00000548130 PSMC4P43686 418 aa10.51□□□□□ -0.73
SMARCC2-205ENST00000548130 GCLCP48506 637 aaPredicted RBP10.51□□□□□ -0.73
SMARCC2-205ENST00000548130 KIF22Q14807 665 aa10.51□□□□□ -0.73
SMARCC2-205ENST00000548130 POTEEQ6S8J3 1075 aa10.51□□□□□ -0.73
SMARCC2-205ENST00000548130 KIAA1211Q6ZU35 1233 aa10.51□□□□□ -0.73
SMARCC2-205ENST00000548130 LPAR1Q92633 364 aa10.51□□□□□ -0.73
SMARCC2-205ENST00000548130 CHMP4CQ96CF2 233 aa10.51□□□□□ -0.73
SMARCC2-205ENST00000548130 NUP88Q99567 741 aaPredicted RBP10.51□□□□□ -0.73
SMARCC2-205ENST00000548130 PAGR1Q9BTK6 254 aa10.51□□□□□ -0.73
SMARCC2-205ENST00000548130 TANGO6Q9C0B7 1094 aa10.51□□□□□ -0.73
SMARCC2-205ENST00000548130 GOPCQ9HD26 462 aa10.51□□□□□ -0.73
SMARCC2-205ENST00000548130 TXNRD2Q9NNW7 524 aa10.51□□□□□ -0.73
SMARCC2-205ENST00000548130 IL17RBQ9NRM6 502 aa10.51□□□□□ -0.73
SMARCC2-205ENST00000548130 STK24Q9Y6E0 443 aa10.51□□□□□ -0.73
SMARCC2-205ENST00000548130 LOC285556D6RIA3 1793 aa10.5□□□□□ -0.73
SMARCC2-205ENST00000548130 SPDYE16A6NNV3 312 aaPredicted RBP10.5□□□□□ -0.73
SMARCC2-205ENST00000548130 F5H6K3 240 aa10.5□□□□□ -0.73
SMARCC2-205ENST00000548130 STK25O00506 426 aa10.5□□□□□ -0.73
SMARCC2-205ENST00000548130 WDR46O15213 610 aaKnown RBP10.5□□□□□ -0.73
SMARCC2-205ENST00000548130 FLOT1O75955 427 aa10.5□□□□□ -0.73
SMARCC2-205ENST00000548130 NDUFB10O96000 172 aa10.5□□□□□ -0.73
SMARCC2-205ENST00000548130 PCP11498 1178 aaKnown RBP10.5□□□□□ -0.73
SMARCC2-205ENST00000548130 KLRC3Q07444 240 aa10.5□□□□□ -0.73
SMARCC2-205ENST00000548130 FAM110CQ1W6H9 321 aa10.5□□□□□ -0.73
SMARCC2-205ENST00000548130 FAM83BQ5T0W9 1011 aa10.5□□□□□ -0.73
SMARCC2-205ENST00000548130 MKL1Q969V6 931 aa10.5□□□□□ -0.73
SMARCC2-205ENST00000548130 TRIM47Q96LD4 638 aa10.5□□□□□ -0.73
SMARCC2-205ENST00000548130 LSG1Q9H089 658 aaKnown RBP10.5□□□□□ -0.73
SMARCC2-205ENST00000548130 RBPJLQ9UBG7 517 aa10.5□□□□□ -0.73
SMARCC2-205ENST00000548130 STX8Q9UNK0 236 aa10.5□□□□□ -0.73
SMARCC2-205ENST00000548130 MTMR7Q9Y216 660 aa10.5□□□□□ -0.73
SMARCC2-205ENST00000548130 RBM8AQ9Y5S9 174 aaKnown RBP10.5□□□□□ -0.73
SMARCC2-205ENST00000548130 B4E1Z4 1266 aa10.49□□□□□ -0.73
SMARCC2-205ENST00000548130 KDM4AO75164 1064 aa10.49□□□□□ -0.73
SMARCC2-205ENST00000548130 CNMDO75829 334 aa10.49□□□□□ -0.73
SMARCC2-205ENST00000548130 CYP21A2P08686 494 aa10.49□□□□□ -0.73
SMARCC2-205ENST00000548130 FCGRTP55899 365 aa10.49□□□□□ -0.73
SMARCC2-205ENST00000548130 COG2Q14746 738 aa10.49□□□□□ -0.73
SMARCC2-205ENST00000548130 ARHGEF6Q15052 776 aa10.49□□□□□ -0.73
SMARCC2-205ENST00000548130 Q3C1V9 767 aa10.49□□□□□ -0.73
SMARCC2-205ENST00000548130 SLFN13Q68D06 897 aa10.49□□□□□ -0.73
SMARCC2-205ENST00000548130 CASC1Q6TDU7 716 aa10.49□□□□□ -0.73
SMARCC2-205ENST00000548130 GPRC5AQ8NFJ5 357 aa10.49□□□□□ -0.73
SMARCC2-205ENST00000548130 ESR2Q92731 530 aa10.49□□□□□ -0.73
SMARCC2-205ENST00000548130 MAP4K1Q92918 833 aa10.49□□□□□ -0.73
SMARCC2-205ENST00000548130 ATG4CQ96DT6 458 aa10.49□□□□□ -0.73
SMARCC2-205ENST00000548130 ABHD8Q96I13 439 aa10.49□□□□□ -0.73
SMARCC2-205ENST00000548130 ZKSCAN3Q9BRR0 538 aa10.49□□□□□ -0.73
SMARCC2-205ENST00000548130 ANO2Q9NQ90 1003 aa10.49□□□□□ -0.73
SMARCC2-205ENST00000548130 FBXO28Q9NVF7 368 aa10.49□□□□□ -0.73
SMARCC2-205ENST00000548130 MORF4L1Q9UBU8 362 aa10.49□□□□□ -0.73
SMARCC2-205ENST00000548130 ISY1Q9ULR0 285 aaKnown RBP10.49□□□□□ -0.73
SMARCC2-205ENST00000548130 TAF6LQ9Y6J9 622 aa10.49□□□□□ -0.73
SMARCC2-205ENST00000548130 ERVK-9P63128 1117 aa10.48□□□□□ -0.73
SMARCC2-205ENST00000548130 ERVK-24P63145 666 aa10.48□□□□□ -0.73
SMARCC2-205ENST00000548130 PKN2Q16513 984 aaKnown RBP10.48□□□□□ -0.73
SMARCC2-205ENST00000548130 PPP4R3BQ5MIZ7 849 aa10.48□□□□□ -0.73
SMARCC2-205ENST00000548130 LCE2DQ5TA82 110 aaPredicted RBP10.48□□□□□ -0.73
SMARCC2-205ENST00000548130 FBXO46Q6PJ61 603 aaPredicted RBP10.48□□□□□ -0.73
SMARCC2-205ENST00000548130 RASGRP2Q7LDG7 609 aa10.48□□□□□ -0.73
SMARCC2-205ENST00000548130 GMCL1P1Q8NEA9 526 aa10.48□□□□□ -0.73
SMARCC2-205ENST00000548130 GTF3C2Q8WUA4 911 aaPredicted RBP10.48□□□□□ -0.73
SMARCC2-205ENST00000548130 TCP11L1Q9NUJ3 509 aa10.48□□□□□ -0.73
SMARCC2-205ENST00000548130 HOXC10Q9NYD6 342 aa10.48□□□□□ -0.73
SMARCC2-205ENST00000548130 BTBD7Q9P203 1132 aa10.48□□□□□ -0.73
SMARCC2-205ENST00000548130 HPS5Q9UPZ3 1129 aa10.48□□□□□ -0.73
SMARCC2-205ENST00000548130 PTPN22Q9Y2R2 807 aa10.48□□□□□ -0.73
SMARCC2-205ENST00000548130 RABGAP1Q9Y3P9 1069 aa10.48□□□□□ -0.73
SMARCC2-205ENST00000548130 PTCH2Q9Y6C5 1203 aa10.48□□□□□ -0.73
SMARCC2-205ENST00000548130 MYH8P13535 1937 aa10.48□□□□□ -0.73
SMARCC2-205ENST00000548130 GREB1LQ9C091 1923 aaPredicted RBP10.47□□□□□ -0.73
SMARCC2-205ENST00000548130 TNPO2O14787 897 aaKnown RBP10.47□□□□□ -0.73
SMARCC2-205ENST00000548130 TOP1P11387 765 aaKnown RBP10.47□□□□□ -0.73
SMARCC2-205ENST00000548130 MCCP23508 829 aa10.47□□□□□ -0.73
SMARCC2-205ENST00000548130 HOXD10P28358 340 aa10.47□□□□□ -0.73
SMARCC2-205ENST00000548130 NOVP48745 357 aa10.47□□□□□ -0.73
SMARCC2-205ENST00000548130 PRKCZQ05513 592 aa10.47□□□□□ -0.73
SMARCC2-205ENST00000548130 LBX2Q6XYB7 198 aa10.47□□□□□ -0.73
SMARCC2-205ENST00000548130 STOX1Q6ZVD7 989 aa10.47□□□□□ -0.73
SMARCC2-205ENST00000548130 TMEM47Q9BQJ4 181 aa10.47□□□□□ -0.73
SMARCC2-205ENST00000548130 KRT23Q9C075 422 aa10.47□□□□□ -0.73
SMARCC2-205ENST00000548130 PORCNQ9H237 461 aa10.47□□□□□ -0.73
SMARCC2-205ENST00000548130 ZSWIM5Q9P217 1185 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms