RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 CNMDO75829 334 aa8.05□□□□□ -1.12
SCAF11-211ENST00000547950 GLRX3O76003 335 aaKnown RBP8.05□□□□□ -1.12
SCAF11-211ENST00000547950 APPP05067 770 aa8.05□□□□□ -1.12
SCAF11-211ENST00000547950 XRCC5P13010 732 aaKnown RBP8.05□□□□□ -1.12
SCAF11-211ENST00000547950 ZKSCAN1P17029 563 aaPredicted RBP8.05□□□□□ -1.12
SCAF11-211ENST00000547950 CCL14Q16627 93 aa8.05□□□□□ -1.12
SCAF11-211ENST00000547950 KIAA1755Q5JYT7 1200 aa8.05□□□□□ -1.12
SCAF11-211ENST00000547950 CTR9Q6PD62 1173 aa8.05□□□□□ -1.12
SCAF11-211ENST00000547950 TMEM179Q6ZVK1 233 aa8.05□□□□□ -1.12
SCAF11-211ENST00000547950 CLEC10AQ8IUN9 316 aa8.05□□□□□ -1.12
SCAF11-211ENST00000547950 SIAH1Q8IUQ4 282 aa8.05□□□□□ -1.12
SCAF11-211ENST00000547950 SOCS4Q8WXH5 440 aa8.05□□□□□ -1.12
SCAF11-211ENST00000547950 DDX27Q96GQ7 796 aaKnown RBP8.05□□□□□ -1.12
SCAF11-211ENST00000547950 PAWRQ96IZ0 340 aaKnown RBP8.05□□□□□ -1.12
SCAF11-211ENST00000547950 YTHDC1Q96MU7 727 aaKnown RBP8.05□□□□□ -1.12
SCAF11-211ENST00000547950 STRBPQ96SI9 672 aaKnown RBP8.05□□□□□ -1.12
SCAF11-211ENST00000547950 ARHGEF10LQ9HCE6 1279 aa8.05□□□□□ -1.12
SCAF11-211ENST00000547950 HOXC10Q9NYD6 342 aa8.05□□□□□ -1.12
SCAF11-211ENST00000547950 BTBD7Q9P203 1132 aa8.05□□□□□ -1.12
SCAF11-211ENST00000547950 DOCK2Q92608 1830 aa8.05□□□□□ -1.12
SCAF11-211ENST00000547950 MINDY4BA8MYZ0 360 aa8.04□□□□□ -1.12
SCAF11-211ENST00000547950 TK2O00142 265 aa8.04□□□□□ -1.12
SCAF11-211ENST00000547950 RNF113AO15541 343 aaKnown RBP8.04□□□□□ -1.12
SCAF11-211ENST00000547950 RAD21O60216 631 aa8.04□□□□□ -1.12
SCAF11-211ENST00000547950 EVI5O60447 810 aa8.04□□□□□ -1.12
SCAF11-211ENST00000547950 EEF2P13639 858 aaKnown RBP8.04□□□□□ -1.12
SCAF11-211ENST00000547950 PTPREP23469 700 aa8.04□□□□□ -1.12
SCAF11-211ENST00000547950 RGS2P41220 211 aa8.04□□□□□ -1.12
SCAF11-211ENST00000547950 ICA1Q05084 483 aa8.04□□□□□ -1.12
SCAF11-211ENST00000547950 CACNB2Q08289 660 aaPredicted RBP8.04□□□□□ -1.12
SCAF11-211ENST00000547950 MAP2K5Q13163 448 aa8.04□□□□□ -1.12
SCAF11-211ENST00000547950 PLS1Q14651 629 aa8.04□□□□□ -1.12
SCAF11-211ENST00000547950 MORN1Q5T089 497 aa8.04□□□□□ -1.12
SCAF11-211ENST00000547950 NECAB2Q7Z6G3 386 aa8.04□□□□□ -1.12
SCAF11-211ENST00000547950 TRMT44Q8IYL2 757 aaKnown RBP8.04□□□□□ -1.12
SCAF11-211ENST00000547950 KBTBD3Q8NAB2 608 aa8.04□□□□□ -1.12
SCAF11-211ENST00000547950 DIS3LQ8TF46 1054 aaKnown RBP8.04□□□□□ -1.12
SCAF11-211ENST00000547950 USP6NLQ92738 828 aa8.04□□□□□ -1.12
SCAF11-211ENST00000547950 OSBP2Q969R2 916 aa8.04□□□□□ -1.12
SCAF11-211ENST00000547950 CCDC17Q96LX7 622 aa8.04□□□□□ -1.12
SCAF11-211ENST00000547950 NR2E3Q9Y5X4 410 aa8.04□□□□□ -1.12
SCAF11-211ENST00000547950 IVNS1ABPQ9Y6Y0 642 aa8.04□□□□□ -1.12
SCAF11-211ENST00000547950 DOCK1Q14185 1865 aa8.03□□□□□ -1.12
SCAF11-211ENST00000547950 SLC15A5A6NIM6 579 aa8.03□□□□□ -1.12
SCAF11-211ENST00000547950 SPDYE16A6NNV3 312 aaPredicted RBP8.03□□□□□ -1.12
SCAF11-211ENST00000547950 GSG1L2A8MUP6 293 aa8.03□□□□□ -1.12
SCAF11-211ENST00000547950 FLOT1O75955 427 aa8.03□□□□□ -1.12
SCAF11-211ENST00000547950 ZFYP08048 801 aaPredicted RBP8.03□□□□□ -1.12
SCAF11-211ENST00000547950 CAPN2P17655 700 aa8.03□□□□□ -1.12
SCAF11-211ENST00000547950 CNGA1P29973 690 aa8.03□□□□□ -1.12
SCAF11-211ENST00000547950 CCND3P30281 292 aaPredicted RBP8.03□□□□□ -1.12
SCAF11-211ENST00000547950 RRP1P56182 461 aaKnown RBP8.03□□□□□ -1.12
SCAF11-211ENST00000547950 MFSD14CQ5VZR4 134 aa8.03□□□□□ -1.12
SCAF11-211ENST00000547950 LBX2Q6XYB7 198 aa8.03□□□□□ -1.12
SCAF11-211ENST00000547950 C16orf86Q6ZW13 317 aa8.03□□□□□ -1.12
SCAF11-211ENST00000547950 DPP9Q86TI2 863 aa8.03□□□□□ -1.12
SCAF11-211ENST00000547950 OTUD7AQ8TE49 926 aaPredicted RBP8.03□□□□□ -1.12
SCAF11-211ENST00000547950 APPBP2Q92624 585 aa8.03□□□□□ -1.12
SCAF11-211ENST00000547950 CRBNQ96SW2 442 aa8.03□□□□□ -1.12
SCAF11-211ENST00000547950 MOV10L1Q9BXT6 1211 aaKnown RBP8.03□□□□□ -1.12
SCAF11-211ENST00000547950 NBPF3Q9H094 633 aa8.03□□□□□ -1.12
SCAF11-211ENST00000547950 SH2D4AQ9H788 454 aa8.03□□□□□ -1.12
SCAF11-211ENST00000547950 VCPKMTQ9H867 229 aa8.03□□□□□ -1.12
SCAF11-211ENST00000547950 KANSL2Q9H9L4 492 aa8.03□□□□□ -1.12
SCAF11-211ENST00000547950 MKNK2Q9HBH9 465 aa8.03□□□□□ -1.12
SCAF11-211ENST00000547950 TMX2Q9Y320 296 aa8.03□□□□□ -1.12
SCAF11-211ENST00000547950 PDE4DIPQ5VU43 2346 aa8.03□□□□□ -1.12
SCAF11-211ENST00000547950 KIAA0100Q14667 2235 aaKnown RBP8.02□□□□□ -1.13
SCAF11-211ENST00000547950 CENPFP49454 3210 aa8.02□□□□□ -1.13
SCAF11-211ENST00000547950 PATL2C9JE40 543 aaKnown RBP8.02□□□□□ -1.13
SCAF11-211ENST00000547950 M0R2C6 588 aa8.02□□□□□ -1.13
SCAF11-211ENST00000547950 ERC2O15083 957 aa8.02□□□□□ -1.13
SCAF11-211ENST00000547950 GPAA1O43292 621 aa8.02□□□□□ -1.13
SCAF11-211ENST00000547950 TDO2P48775 406 aa8.02□□□□□ -1.13
SCAF11-211ENST00000547950 LRRFIP1Q32MZ4 808 aaKnown RBP8.02□□□□□ -1.13
SCAF11-211ENST00000547950 SBK1Q52WX2 424 aa8.02□□□□□ -1.13
SCAF11-211ENST00000547950 MAP3K21Q5TCX8 1036 aa8.02□□□□□ -1.13
SCAF11-211ENST00000547950 ANKRD45Q5TZF3 282 aa8.02□□□□□ -1.13
SCAF11-211ENST00000547950 NCAPG2Q86XI2 1143 aa8.02□□□□□ -1.13
SCAF11-211ENST00000547950 ZNF444Q8N0Y2 327 aaPredicted RBP8.02□□□□□ -1.13
SCAF11-211ENST00000547950 ANKLE1Q8NAG6 615 aa8.02□□□□□ -1.13
SCAF11-211ENST00000547950 NPLOC4Q8TAT6 608 aa8.02□□□□□ -1.13
SCAF11-211ENST00000547950 LPAR1Q92633 364 aa8.02□□□□□ -1.13
SCAF11-211ENST00000547950 ATG4CQ96DT6 458 aa8.02□□□□□ -1.13
SCAF11-211ENST00000547950 SEC62Q99442 399 aaKnown RBP8.02□□□□□ -1.13
SCAF11-211ENST00000547950 APBA2Q99767 749 aa8.02□□□□□ -1.13
SCAF11-211ENST00000547950 FSD1Q9BTV5 496 aa8.02□□□□□ -1.13
SCAF11-211ENST00000547950 SPATC1LQ9H0A9 340 aa8.02□□□□□ -1.13
SCAF11-211ENST00000547950 C11orf49Q9H6J7 331 aa8.02□□□□□ -1.13
SCAF11-211ENST00000547950 FLRT1Q9NZU1 646 aa8.02□□□□□ -1.13
SCAF11-211ENST00000547950 RBM27Q9P2N5 1060 aaKnown RBP8.02□□□□□ -1.13
SCAF11-211ENST00000547950 HCSTQ9UBK5 93 aa8.02□□□□□ -1.13
SCAF11-211ENST00000547950 ARPP21Q9UBL0 812 aaPredicted RBP8.02□□□□□ -1.13
SCAF11-211ENST00000547950 HRO43593 1189 aa8.01□□□□□ -1.13
SCAF11-211ENST00000547950 STRNO43815 780 aa8.01□□□□□ -1.13
SCAF11-211ENST00000547950 PRDM1O75626 825 aa8.01□□□□□ -1.13
SCAF11-211ENST00000547950 GNAT2P19087 354 aa8.01□□□□□ -1.13
SCAF11-211ENST00000547950 ERCC3P19447 782 aa8.01□□□□□ -1.13
SCAF11-211ENST00000547950 RASA1P20936 1047 aa8.01□□□□□ -1.13
SCAF11-211ENST00000547950 ADORA2AP29274 412 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms