RNA–Protein interactions for RNA: ENST00000546039.5

PAAF1-216, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-216ENST00000546039 HTRA3P83110 453 aa12.57□□□□□ -0.4
PAAF1-216ENST00000546039 TROAPQ12815 778 aa12.57□□□□□ -0.4
PAAF1-216ENST00000546039 DGKZQ13574 1117 aa12.57□□□□□ -0.4
PAAF1-216ENST00000546039 MOGSQ13724 837 aa12.57□□□□□ -0.4
PAAF1-216ENST00000546039 GRM4Q14833 912 aa12.57□□□□□ -0.4
PAAF1-216ENST00000546039 CCDC96Q2M329 555 aa12.57□□□□□ -0.4
PAAF1-216ENST00000546039 KIAA1755Q5JYT7 1200 aa12.57□□□□□ -0.4
PAAF1-216ENST00000546039 GPATCH4Q5T3I0 446 aaKnown RBP12.57□□□□□ -0.4
PAAF1-216ENST00000546039 ANKRD23Q86SG2 305 aa12.57□□□□□ -0.4
PAAF1-216ENST00000546039 MICU3Q86XE3 530 aa12.57□□□□□ -0.4
PAAF1-216ENST00000546039 SPICE1Q8N0Z3 855 aa12.57□□□□□ -0.4
PAAF1-216ENST00000546039 ZNF274Q96GC6 653 aaPredicted RBP12.57□□□□□ -0.4
PAAF1-216ENST00000546039 RPAP3Q9H6T3 665 aaPredicted RBP12.57□□□□□ -0.4
PAAF1-216ENST00000546039 ZCCHC17Q9NP64 241 aaKnown RBP12.57□□□□□ -0.4
PAAF1-216ENST00000546039 MTMR7Q9Y216 660 aa12.57□□□□□ -0.4
PAAF1-216ENST00000546039 SLC45A1Q9Y2W3 748 aa12.57□□□□□ -0.4
PAAF1-216ENST00000546039 SMCHD1A6NHR9 2005 aa12.56□□□□□ -0.4
PAAF1-216ENST00000546039 GOLGA8AA7E2F4 631 aa12.56□□□□□ -0.4
PAAF1-216ENST00000546039 USP17L15C9J2P7 530 aa12.56□□□□□ -0.4
PAAF1-216ENST00000546039 USP17L13C9JLJ4 530 aa12.56□□□□□ -0.4
PAAF1-216ENST00000546039 USP17L11C9JVI0 530 aa12.56□□□□□ -0.4
PAAF1-216ENST00000546039 USP17L18D6R9N7 530 aa12.56□□□□□ -0.4
PAAF1-216ENST00000546039 USP17L22D6RA61 530 aa12.56□□□□□ -0.4
PAAF1-216ENST00000546039 USP17L17D6RBQ6 530 aa12.56□□□□□ -0.4
PAAF1-216ENST00000546039 USP17L19D6RCP7 530 aa12.56□□□□□ -0.4
PAAF1-216ENST00000546039 USP17L20D6RJB6 530 aa12.56□□□□□ -0.4
PAAF1-216ENST00000546039 PARP1P09874 1014 aaKnown RBP12.56□□□□□ -0.4
PAAF1-216ENST00000546039 HOXA7P31268 230 aaPredicted RBP12.56□□□□□ -0.4
PAAF1-216ENST00000546039 KIF5BP33176 963 aa12.56□□□□□ -0.4
PAAF1-216ENST00000546039 MAP2K2P36507 400 aa12.56□□□□□ -0.4
PAAF1-216ENST00000546039 VEGFBP49765 207 aa12.56□□□□□ -0.4
PAAF1-216ENST00000546039 KIF23Q02241 960 aaPredicted RBP12.56□□□□□ -0.4
PAAF1-216ENST00000546039 ZNF543Q08ER8 600 aa12.56□□□□□ -0.4
PAAF1-216ENST00000546039 USP17L24Q0WX57 530 aa12.56□□□□□ -0.4
PAAF1-216ENST00000546039 PPP2R5BQ15173 497 aa12.56□□□□□ -0.4
PAAF1-216ENST00000546039 FAM83BQ5T0W9 1011 aa12.56□□□□□ -0.4
PAAF1-216ENST00000546039 TREML2Q5T2D2 321 aa12.56□□□□□ -0.4
PAAF1-216ENST00000546039 CTCFLQ8NI51 663 aaPredicted RBP12.56□□□□□ -0.4
PAAF1-216ENST00000546039 NUP133Q8WUM0 1156 aa12.56□□□□□ -0.4
PAAF1-216ENST00000546039 MYL10Q9BUA6 226 aa12.56□□□□□ -0.4
PAAF1-216ENST00000546039 TANGO6Q9C0B7 1094 aa12.56□□□□□ -0.4
PAAF1-216ENST00000546039 PNMA3Q9UL41 463 aa12.56□□□□□ -0.4
PAAF1-216ENST00000546039 BRPF3Q9ULD4 1205 aa12.56□□□□□ -0.4
PAAF1-216ENST00000546039 ISY1Q9ULR0 285 aaKnown RBP12.56□□□□□ -0.4
PAAF1-216ENST00000546039 NAP1L2Q9ULW6 460 aaPredicted RBP12.56□□□□□ -0.4
PAAF1-216ENST00000546039 MYPNQ86TC9 1320 aa12.56□□□□□ -0.4
PAAF1-216ENST00000546039 BTBD19C9JJ37 291 aa12.55□□□□□ -0.4
PAAF1-216ENST00000546039 PLA2G6O60733 806 aa12.55□□□□□ -0.4
PAAF1-216ENST00000546039 AOC2O75106 756 aa12.55□□□□□ -0.4
PAAF1-216ENST00000546039 GNAQP50148 359 aa12.55□□□□□ -0.4
PAAF1-216ENST00000546039 METAP2P50579 478 aaKnown RBP eCLIP12.55□□□□□ -0.4
PAAF1-216ENST00000546039 STAT2P52630 851 aa12.55□□□□□ -0.4
PAAF1-216ENST00000546039 RTN1Q16799 776 aa12.55□□□□□ -0.4
PAAF1-216ENST00000546039 OTUD7BQ6GQQ9 843 aa12.55□□□□□ -0.4
PAAF1-216ENST00000546039 GPAT2Q6NUI2 795 aa12.55□□□□□ -0.4
PAAF1-216ENST00000546039 KCTD1Q719H9 257 aa12.55□□□□□ -0.4
PAAF1-216ENST00000546039 RASGRP2Q7LDG7 609 aa12.55□□□□□ -0.4
PAAF1-216ENST00000546039 FAM160B2Q86V87 743 aa12.55□□□□□ -0.4
PAAF1-216ENST00000546039 NUP88Q99567 741 aaPredicted RBP12.55□□□□□ -0.4
PAAF1-216ENST00000546039 RBM28Q9NW13 759 aaKnown RBP12.55□□□□□ -0.4
PAAF1-216ENST00000546039 FEM1BQ9UK73 627 aa12.55□□□□□ -0.4
PAAF1-216ENST00000546039 LIMCH1Q9UPQ0 1083 aa12.55□□□□□ -0.4
PAAF1-216ENST00000546039 ZNFX1Q9P2E3 1918 aaKnown RBP12.54□□□□□ -0.4
PAAF1-216ENST00000546039 PLXNB2O15031 1838 aa12.54□□□□□ -0.4
PAAF1-216ENST00000546039 CCDC196A0A1B0GTZ2 297 aa12.54□□□□□ -0.4
PAAF1-216ENST00000546039 PALM3A6NDB9 673 aaPredicted RBP12.54□□□□□ -0.4
PAAF1-216ENST00000546039 FLOT1O75955 427 aa12.54□□□□□ -0.4
PAAF1-216ENST00000546039 RXRAP19793 462 aa12.54□□□□□ -0.4
PAAF1-216ENST00000546039 OSBPP22059 807 aa12.54□□□□□ -0.4
PAAF1-216ENST00000546039 PDIA3P30101 505 aaKnown RBP12.54□□□□□ -0.4
PAAF1-216ENST00000546039 TM4SF4P48230 202 aa12.54□□□□□ -0.4
PAAF1-216ENST00000546039 IRX3P78415 501 aaPredicted RBP12.54□□□□□ -0.4
PAAF1-216ENST00000546039 IKQ13123 557 aaPredicted RBP12.54□□□□□ -0.4
PAAF1-216ENST00000546039 BTNL9Q6UXG8 535 aa12.54□□□□□ -0.4
PAAF1-216ENST00000546039 CATSPERGQ6ZRH7 1159 aa12.54□□□□□ -0.4
PAAF1-216ENST00000546039 NOL8Q76FK4 1167 aaKnown RBP12.54□□□□□ -0.4
PAAF1-216ENST00000546039 IFNL1Q8IU54 200 aa12.54□□□□□ -0.4
PAAF1-216ENST00000546039 FANCBQ8NB91 859 aa12.54□□□□□ -0.4
PAAF1-216ENST00000546039 CHURC1Q8WUH1 139 aa12.54□□□□□ -0.4
PAAF1-216ENST00000546039 ZSCAN31Q96LW9 406 aaPredicted RBP12.54□□□□□ -0.4
PAAF1-216ENST00000546039 LZTS2Q9BRK4 669 aa12.54□□□□□ -0.4
PAAF1-216ENST00000546039 SH2B1Q9NRF2 756 aaPredicted RBP12.54□□□□□ -0.4
PAAF1-216ENST00000546039 MAD2L2Q9UI95 211 aa12.54□□□□□ -0.4
PAAF1-216ENST00000546039 TPCN1Q9ULQ1 816 aa12.54□□□□□ -0.4
PAAF1-216ENST00000546039 FRMPD2Q68DX3 1309 aaPredicted RBP12.54□□□□□ -0.4
PAAF1-216ENST00000546039 TMEM232C9JQI7 657 aa12.53□□□□□ -0.4
PAAF1-216ENST00000546039 PDHXO00330 501 aa12.53□□□□□ -0.4
PAAF1-216ENST00000546039 IGF2BP3O00425 579 aaKnown RBP eCLIP12.53□□□□□ -0.4
PAAF1-216ENST00000546039 PFKFB2O60825 505 aa12.53□□□□□ -0.4
PAAF1-216ENST00000546039 ALDH1A1P00352 501 aa12.53□□□□□ -0.4
PAAF1-216ENST00000546039 RAB11FIP4Q86YS3 637 aa12.53□□□□□ -0.4
PAAF1-216ENST00000546039 CCDC144CPQ8IYA2 1237 aa12.53□□□□□ -0.4
PAAF1-216ENST00000546039 FAM43AQ8N2R8 423 aa12.53□□□□□ -0.4
PAAF1-216ENST00000546039 GTF3C2Q8WUA4 911 aaPredicted RBP12.53□□□□□ -0.4
PAAF1-216ENST00000546039 CHMP4CQ96CF2 233 aa12.53□□□□□ -0.4
PAAF1-216ENST00000546039 ZIC5Q96T25 663 aa12.53□□□□□ -0.4
PAAF1-216ENST00000546039 PARK7Q99497 189 aaKnown RBP12.53□□□□□ -0.4
PAAF1-216ENST00000546039 PTPN18Q99952 460 aa12.53□□□□□ -0.4
PAAF1-216ENST00000546039 SLF1Q9BQI6 1058 aa12.53□□□□□ -0.4
PAAF1-216ENST00000546039 LARP6Q9BRS8 491 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms