RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 DDAH1O94760 285 aa9.88□□□□□ -0.83
TDP1-204ENST00000545686 PDXDC2PQ6P474 469 aa9.88□□□□□ -0.83
TDP1-204ENST00000545686 CATIPQ7Z7H3 387 aa9.88□□□□□ -0.83
TDP1-204ENST00000545686 SRLQ86TD4 932 aa9.88□□□□□ -0.83
TDP1-204ENST00000545686 CMTR1Q8N1G2 835 aaKnown RBP9.88□□□□□ -0.83
TDP1-204ENST00000545686 CCDC82Q8N4S0 544 aa9.88□□□□□ -0.83
TDP1-204ENST00000545686 EHBP1Q8NDI1 1231 aa9.88□□□□□ -0.83
TDP1-204ENST00000545686 CCDC148Q8NFR7 591 aa9.88□□□□□ -0.83
TDP1-204ENST00000545686 CTCFLQ8NI51 663 aaPredicted RBP9.88□□□□□ -0.83
TDP1-204ENST00000545686 NUP88Q99567 741 aaPredicted RBP9.88□□□□□ -0.83
TDP1-204ENST00000545686 HAUS4Q9H6D7 363 aa9.88□□□□□ -0.83
TDP1-204ENST00000545686 MKRN1Q9UHC7 482 aaKnown RBP9.88□□□□□ -0.83
TDP1-204ENST00000545686 A0A1W2PQC6 194 aa9.87□□□□□ -0.83
TDP1-204ENST00000545686 KCNJ18B7U540 433 aa9.87□□□□□ -0.83
TDP1-204ENST00000545686 CCT6AP40227 531 aaKnown RBP9.87□□□□□ -0.83
TDP1-204ENST00000545686 AARSP49588 968 aaKnown RBP eCLIP9.87□□□□□ -0.83
TDP1-204ENST00000545686 KCNJ12Q14500 433 aa9.87□□□□□ -0.83
TDP1-204ENST00000545686 MAP9Q49MG5 647 aa9.87□□□□□ -0.83
TDP1-204ENST00000545686 TRAPPC11Q7Z392 1133 aa9.87□□□□□ -0.83
TDP1-204ENST00000545686 SMYD4Q8IYR2 804 aaPredicted RBP9.87□□□□□ -0.83
TDP1-204ENST00000545686 ENAHQ8N8S7 591 aaPredicted RBP9.87□□□□□ -0.83
TDP1-204ENST00000545686 ZSCAN10Q96SZ4 725 aaPredicted RBP9.87□□□□□ -0.83
TDP1-204ENST00000545686 ASAP1Q9ULH1 1129 aa9.87□□□□□ -0.83
TDP1-204ENST00000545686 TARSL2A2RTX5 802 aaKnown RBP9.87□□□□□ -0.83
TDP1-204ENST00000545686 H7C1D1 291 aa9.87□□□□□ -0.83
TDP1-204ENST00000545686 MYO1CO00159 1063 aa9.87□□□□□ -0.83
TDP1-204ENST00000545686 NDUFA10O95299 355 aa9.87□□□□□ -0.83
TDP1-204ENST00000545686 RHOXF2BP0C7M4 288 aa9.87□□□□□ -0.83
TDP1-204ENST00000545686 CYP19A1P11511 503 aaPredicted RBP9.87□□□□□ -0.83
TDP1-204ENST00000545686 KRT9P35527 623 aa9.87□□□□□ -0.83
TDP1-204ENST00000545686 GYS2P54840 703 aa9.87□□□□□ -0.83
TDP1-204ENST00000545686 NPY5RQ15761 445 aa9.87□□□□□ -0.83
TDP1-204ENST00000545686 EARS2Q5JPH6 523 aaKnown RBP9.87□□□□□ -0.83
TDP1-204ENST00000545686 RRAGBQ5VZM2 374 aa9.87□□□□□ -0.83
TDP1-204ENST00000545686 ARL6IP4Q66PJ3 421 aaKnown RBP9.87□□□□□ -0.83
TDP1-204ENST00000545686 TMED8Q6PL24 325 aaPredicted RBP9.87□□□□□ -0.83
TDP1-204ENST00000545686 ZNF34Q8IZ26 560 aa9.87□□□□□ -0.83
TDP1-204ENST00000545686 PIGBQ92521 554 aa9.87□□□□□ -0.83
TDP1-204ENST00000545686 DNAJC7Q99615 494 aa9.87□□□□□ -0.83
TDP1-204ENST00000545686 RHOXF2Q9BQY4 288 aa9.87□□□□□ -0.83
TDP1-204ENST00000545686 FAN1Q9Y2M0 1017 aa9.87□□□□□ -0.83
TDP1-204ENST00000545686 KAT6BQ8WYB5 2073 aa9.86□□□□□ -0.83
TDP1-204ENST00000545686 FGRP09769 529 aa9.86□□□□□ -0.83
TDP1-204ENST00000545686 CASP1P29466 404 aa9.86□□□□□ -0.83
TDP1-204ENST00000545686 CKAP4Q07065 602 aaKnown RBP9.86□□□□□ -0.83
TDP1-204ENST00000545686 PTGDRQ13258 359 aa9.86□□□□□ -0.83
TDP1-204ENST00000545686 IFIT1BQ5T764 474 aaKnown RBP9.86□□□□□ -0.83
TDP1-204ENST00000545686 TMTC3Q6ZXV5 915 aa9.86□□□□□ -0.83
TDP1-204ENST00000545686 NELFBQ8WX92 580 aa9.86□□□□□ -0.83
TDP1-204ENST00000545686 EPN1Q9Y6I3 576 aaPredicted RBP9.86□□□□□ -0.83
TDP1-204ENST00000545686 CNTNAP5Q8WYK1 1306 aa9.86□□□□□ -0.83
TDP1-204ENST00000545686 BCL9O00512 1426 aa9.86□□□□□ -0.83
TDP1-204ENST00000545686 MYL1P05976 194 aa9.85□□□□□ -0.83
TDP1-204ENST00000545686 EEF1GP26641 437 aaKnown RBP9.85□□□□□ -0.83
TDP1-204ENST00000545686 LONP1P36776 959 aaKnown RBP9.85□□□□□ -0.83
TDP1-204ENST00000545686 IL6STP40189 918 aaPredicted RBP9.85□□□□□ -0.83
TDP1-204ENST00000545686 USP14P54578 494 aa9.85□□□□□ -0.83
TDP1-204ENST00000545686 TROAPQ12815 778 aa9.85□□□□□ -0.83
TDP1-204ENST00000545686 IQCA1Q86XH1 822 aa9.85□□□□□ -0.83
TDP1-204ENST00000545686 HELBQ8NG08 1087 aaPredicted RBP9.85□□□□□ -0.83
TDP1-204ENST00000545686 SLF1Q9BQI6 1058 aa9.85□□□□□ -0.83
TDP1-204ENST00000545686 BRIP1Q9BX63 1249 aa9.85□□□□□ -0.83
TDP1-204ENST00000545686 VPS16Q9H269 839 aa9.85□□□□□ -0.83
TDP1-204ENST00000545686 TAB2Q9NYJ8 693 aa9.85□□□□□ -0.83
TDP1-204ENST00000545686 RRP15Q9Y3B9 282 aaKnown RBP9.85□□□□□ -0.83
TDP1-204ENST00000545686 PDS5AQ29RF7 1337 aaKnown RBP9.85□□□□□ -0.83
TDP1-204ENST00000545686 LGALS16A8MUM7 142 aa9.85□□□□□ -0.83
TDP1-204ENST00000545686 RPN1P04843 607 aaKnown RBP9.85□□□□□ -0.83
TDP1-204ENST00000545686 ZNF174Q15697 407 aa9.85□□□□□ -0.83
TDP1-204ENST00000545686 NOM1Q5C9Z4 860 aaKnown RBP9.85□□□□□ -0.83
TDP1-204ENST00000545686 PAPD7Q5XG87 772 aaKnown RBP9.85□□□□□ -0.83
TDP1-204ENST00000545686 NOA1Q8NC60 698 aaKnown RBP9.85□□□□□ -0.83
TDP1-204ENST00000545686 OR8K1Q8NGG5 319 aa9.85□□□□□ -0.83
TDP1-204ENST00000545686 LRP2BPQ9P2M1 347 aa9.85□□□□□ -0.83
TDP1-204ENST00000545686 REXO2Q9Y3B8 237 aaKnown RBP9.85□□□□□ -0.83
TDP1-204ENST00000545686 V9GY48 417 aaPredicted RBP9.85□□□□□ -0.83
TDP1-204ENST00000545686 DOT1LQ8TEK3 1739 aa9.85□□□□□ -0.83
TDP1-204ENST00000545686 ZNF804BA4D1E1 1349 aa9.84□□□□□ -0.83
TDP1-204ENST00000545686 SOS2Q07890 1332 aaPredicted RBP9.84□□□□□ -0.83
TDP1-204ENST00000545686 BAZ2BQ9UIF8 2168 aaKnown RBP9.84□□□□□ -0.83
TDP1-204ENST00000545686 MAGEB6P1A0A0J9YX57 407 aa9.84□□□□□ -0.83
TDP1-204ENST00000545686 WNT7AO00755 349 aa9.84□□□□□ -0.83
TDP1-204ENST00000545686 PLEKHA8P1O95397 391 aa9.84□□□□□ -0.83
TDP1-204ENST00000545686 CYP7A1P22680 504 aa9.84□□□□□ -0.83
TDP1-204ENST00000545686 KRT83P78385 493 aa9.84□□□□□ -0.83
TDP1-204ENST00000545686 UBXN1Q04323 297 aa9.84□□□□□ -0.83
TDP1-204ENST00000545686 KCNB1Q14721 858 aa9.84□□□□□ -0.83
TDP1-204ENST00000545686 MIGA1Q8NAN2 632 aa9.84□□□□□ -0.83
TDP1-204ENST00000545686 NOC3LQ8WTT2 800 aaKnown RBP9.84□□□□□ -0.83
TDP1-204ENST00000545686 RUBCNQ92622 972 aa9.84□□□□□ -0.83
TDP1-204ENST00000545686 CCDC102AQ96A19 550 aa9.84□□□□□ -0.83
TDP1-204ENST00000545686 THAP9Q9H5L6 903 aa9.84□□□□□ -0.83
TDP1-204ENST00000545686 CAPN11Q9UMQ6 739 aa9.84□□□□□ -0.83
TDP1-204ENST00000545686 ANO9A1A5B4 782 aa9.84□□□□□ -0.83
TDP1-204ENST00000545686 MINDY4BA8MYZ0 360 aa9.84□□□□□ -0.83
TDP1-204ENST00000545686 RNF225M0QZC1 329 aaPredicted RBP9.84□□□□□ -0.83
TDP1-204ENST00000545686 N4BP1O75113 896 aaKnown RBP9.84□□□□□ -0.83
TDP1-204ENST00000545686 PRDM1O75626 825 aa9.84□□□□□ -0.83
TDP1-204ENST00000545686 MEA1Q16626 185 aa9.84□□□□□ -0.83
TDP1-204ENST00000545686 TSR1Q2NL82 804 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms