RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 SPATC1LQ9H0A9 340 aa18.6■□□□□ 0.57
CCDC78-216ENST00000544996 POTEFA5A3E0 1075 aa18.59■□□□□ 0.57
CCDC78-216ENST00000544996 CYP2B6P20813 491 aa18.59■□□□□ 0.57
CCDC78-216ENST00000544996 CHMLP26374 656 aa18.59■□□□□ 0.57
CCDC78-216ENST00000544996 IMMTQ16891 758 aaKnown RBP18.59■□□□□ 0.57
CCDC78-216ENST00000544996 STAG1Q8WVM7 1258 aa18.59■□□□□ 0.57
CCDC78-216ENST00000544996 NUP88Q99567 741 aaPredicted RBP18.59■□□□□ 0.57
CCDC78-216ENST00000544996 IL17RBQ9NRM6 502 aa18.59■□□□□ 0.57
CCDC78-216ENST00000544996 FBXO28Q9NVF7 368 aa18.59■□□□□ 0.57
CCDC78-216ENST00000544996 PPP1R9AQ9ULJ8 1098 aa18.59■□□□□ 0.57
CCDC78-216ENST00000544996 HTTP42858 3142 aa18.59■□□□□ 0.57
CCDC78-216ENST00000544996 MGAMO43451 1857 aa18.58■□□□□ 0.57
CCDC78-216ENST00000544996 INHAP05111 366 aa18.58■□□□□ 0.56
CCDC78-216ENST00000544996 XRCC5P13010 732 aaKnown RBP18.58■□□□□ 0.56
CCDC78-216ENST00000544996 RGS2P41220 211 aa18.58■□□□□ 0.56
CCDC78-216ENST00000544996 NT5C2P49902 561 aa18.58■□□□□ 0.56
CCDC78-216ENST00000544996 SLFN13Q68D06 897 aa18.58■□□□□ 0.56
CCDC78-216ENST00000544996 TRMT44Q8IYL2 757 aaKnown RBP18.58■□□□□ 0.56
CCDC78-216ENST00000544996 ESR2Q92731 530 aa18.58■□□□□ 0.56
CCDC78-216ENST00000544996 SLF1Q9BQI6 1058 aa18.58■□□□□ 0.56
CCDC78-216ENST00000544996 MOV10L1Q9BXT6 1211 aaKnown RBP18.58■□□□□ 0.56
CCDC78-216ENST00000544996 ADAMTS5Q9UNA0 930 aa18.58■□□□□ 0.56
CCDC78-216ENST00000544996 TACC3Q9Y6A5 838 aa18.58■□□□□ 0.56
CCDC78-216ENST00000544996 GREB1LQ9C091 1923 aaPredicted RBP18.58■□□□□ 0.56
CCDC78-216ENST00000544996 SLC15A5A6NIM6 579 aa18.57■□□□□ 0.56
CCDC78-216ENST00000544996 NMT2O60551 498 aa18.57■□□□□ 0.56
CCDC78-216ENST00000544996 HMGCRP04035 888 aa18.57■□□□□ 0.56
CCDC78-216ENST00000544996 CCL5P13501 91 aa18.57■□□□□ 0.56
CCDC78-216ENST00000544996 MTFR1Q15390 333 aa18.57■□□□□ 0.56
CCDC78-216ENST00000544996 MORN1Q5T089 497 aa18.57■□□□□ 0.56
CCDC78-216ENST00000544996 PRPF38AQ8NAV1 312 aaKnown RBP18.57■□□□□ 0.56
CCDC78-216ENST00000544996 SHCBP1Q8NEM2 672 aa18.57■□□□□ 0.56
CCDC78-216ENST00000544996 RNF208Q9H0X6 261 aa18.57■□□□□ 0.56
CCDC78-216ENST00000544996 MROH8Q9H579 483 aa18.57■□□□□ 0.56
CCDC78-216ENST00000544996 ISY1Q9ULR0 285 aaKnown RBP18.57■□□□□ 0.56
CCDC78-216ENST00000544996 VWA5AO00534 786 aa18.56■□□□□ 0.56
CCDC78-216ENST00000544996 STRNO43815 780 aa18.56■□□□□ 0.56
CCDC78-216ENST00000544996 BMP3P12645 472 aa18.56■□□□□ 0.56
CCDC78-216ENST00000544996 ERCC3P19447 782 aa18.56■□□□□ 0.56
CCDC78-216ENST00000544996 PTPREP23469 700 aa18.56■□□□□ 0.56
CCDC78-216ENST00000544996 SLC1A4P43007 532 aa18.56■□□□□ 0.56
CCDC78-216ENST00000544996 NCAPG2Q86XI2 1143 aa18.56■□□□□ 0.56
CCDC78-216ENST00000544996 TBC1D10CQ8IV04 446 aa18.56■□□□□ 0.56
CCDC78-216ENST00000544996 NKX2-3Q8TAU0 364 aa18.56■□□□□ 0.56
CCDC78-216ENST00000544996 USP6NLQ92738 828 aa18.56■□□□□ 0.56
CCDC78-216ENST00000544996 NBPF3Q9H094 633 aa18.56■□□□□ 0.56
CCDC78-216ENST00000544996 TCP11L1Q9NUJ3 509 aa18.56■□□□□ 0.56
CCDC78-216ENST00000544996 FEM1BQ9UK73 627 aa18.56■□□□□ 0.56
CCDC78-216ENST00000544996 CTDP1Q9Y5B0 961 aaPredicted RBP18.56■□□□□ 0.56
CCDC78-216ENST00000544996 SLC25A27O95847 323 aa18.55■□□□□ 0.56
CCDC78-216ENST00000544996 ZKSCAN1P17029 563 aaPredicted RBP18.55■□□□□ 0.56
CCDC78-216ENST00000544996 EN2P19622 333 aaPredicted RBP18.55■□□□□ 0.56
CCDC78-216ENST00000544996 MAP2K5Q13163 448 aa18.55■□□□□ 0.56
CCDC78-216ENST00000544996 TMEM132BQ14DG7 1078 aa18.55■□□□□ 0.56
CCDC78-216ENST00000544996 GMCL1Q96IK5 515 aa18.55■□□□□ 0.56
CCDC78-216ENST00000544996 APBA2Q99767 749 aa18.55■□□□□ 0.56
CCDC78-216ENST00000544996 IL25Q9H293 177 aa18.55■□□□□ 0.56
CCDC78-216ENST00000544996 ZBED4O75132 1171 aa18.54■□□□□ 0.56
CCDC78-216ENST00000544996 CENPBP07199 599 aaPredicted RBP18.54■□□□□ 0.56
CCDC78-216ENST00000544996 GJB1P08034 283 aa18.54■□□□□ 0.56
CCDC78-216ENST00000544996 TOP1P11387 765 aaKnown RBP18.54■□□□□ 0.56
CCDC78-216ENST00000544996 MCCP23508 829 aa18.54■□□□□ 0.56
CCDC78-216ENST00000544996 COPB2P35606 906 aa18.54■□□□□ 0.56
CCDC78-216ENST00000544996 STAT3P40763 770 aa18.54■□□□□ 0.56
CCDC78-216ENST00000544996 NOVP48745 357 aa18.54■□□□□ 0.56
CCDC78-216ENST00000544996 GRB14Q14449 540 aa18.54■□□□□ 0.56
CCDC78-216ENST00000544996 CHURC1Q8WUH1 139 aa18.54■□□□□ 0.56
CCDC78-216ENST00000544996 KIFC2Q96AC6 838 aa18.54■□□□□ 0.56
CCDC78-216ENST00000544996 TTC14Q96N46 770 aa18.54■□□□□ 0.56
CCDC78-216ENST00000544996 UNC93B1Q9H1C4 597 aa18.54■□□□□ 0.56
CCDC78-216ENST00000544996 NEDD4P46934 1319 aa18.53■□□□□ 0.56
CCDC78-216ENST00000544996 TMEM232C9JQI7 657 aa18.53■□□□□ 0.56
CCDC78-216ENST00000544996 SGSM2O43147 1006 aa18.53■□□□□ 0.56
CCDC78-216ENST00000544996 STAT2P52630 851 aa18.53■□□□□ 0.56
CCDC78-216ENST00000544996 IKQ13123 557 aaPredicted RBP18.53■□□□□ 0.56
CCDC78-216ENST00000544996 CCDC178Q5BJE1 867 aa18.53■□□□□ 0.56
CCDC78-216ENST00000544996 DPP9Q86TI2 863 aa18.53■□□□□ 0.56
CCDC78-216ENST00000544996 IQCA1Q86XH1 822 aa18.53■□□□□ 0.56
CCDC78-216ENST00000544996 RIOX2Q8IUF8 465 aa18.53■□□□□ 0.56
CCDC78-216ENST00000544996 TRIB2Q92519 343 aa18.53■□□□□ 0.56
CCDC78-216ENST00000544996 KRT23Q9C075 422 aa18.53■□□□□ 0.56
CCDC78-216ENST00000544996 CNNM2Q9H8M5 875 aa18.53■□□□□ 0.56
CCDC78-216ENST00000544996 SLC5A4Q9NY91 659 aa18.53■□□□□ 0.56
CCDC78-216ENST00000544996 FDX1P10109 184 aa18.52■□□□□ 0.56
CCDC78-216ENST00000544996 FCER1AP12319 257 aa18.52■□□□□ 0.56
CCDC78-216ENST00000544996 BMP2KLQ5H9B9 411 aa18.52■□□□□ 0.56
CCDC78-216ENST00000544996 RCSD1Q6JBY9 416 aa18.52■□□□□ 0.56
CCDC78-216ENST00000544996 KIAA1211Q6ZU35 1233 aa18.52■□□□□ 0.56
CCDC78-216ENST00000544996 FAM160B2Q86V87 743 aa18.52■□□□□ 0.56
CCDC78-216ENST00000544996 ABRAQ8N0Z2 381 aa18.52■□□□□ 0.56
CCDC78-216ENST00000544996 TEX13BQ9BXU2 312 aa18.52■□□□□ 0.56
CCDC78-216ENST00000544996 HMX1Q9NP08 348 aaPredicted RBP18.52■□□□□ 0.56
CCDC78-216ENST00000544996 MTMR7Q9Y216 660 aa18.52■□□□□ 0.56
CCDC78-216ENST00000544996 U3KPZ7 1027 aaPredicted RBP18.52■□□□□ 0.56
CCDC78-216ENST00000544996 RPTORQ8N122 1335 aa18.51■□□□□ 0.55
CCDC78-216ENST00000544996 KDM4AO75164 1064 aa18.51■□□□□ 0.55
CCDC78-216ENST00000544996 HOXC6P09630 235 aa18.51■□□□□ 0.55
CCDC78-216ENST00000544996 CAPN2P17655 700 aa18.51■□□□□ 0.55
CCDC78-216ENST00000544996 ADORA2AP29274 412 aa18.51■□□□□ 0.55
CCDC78-216ENST00000544996 GJA8P48165 433 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms