RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 CEP95Q96GE4 821 aa13.99□□□□□ -0.17
HDAC4-216ENST00000544989 APBA2Q99767 749 aa13.99□□□□□ -0.17
HDAC4-216ENST00000544989 SPATC1LQ9H0A9 340 aa13.99□□□□□ -0.17
HDAC4-216ENST00000544989 RNF208Q9H0X6 261 aa13.99□□□□□ -0.17
HDAC4-216ENST00000544989 PORCNQ9H237 461 aa13.99□□□□□ -0.17
HDAC4-216ENST00000544989 MROH8Q9H579 483 aa13.99□□□□□ -0.17
HDAC4-216ENST00000544989 SLC5A4Q9NY91 659 aa13.99□□□□□ -0.17
HDAC4-216ENST00000544989 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.99□□□□□ -0.174e-7■■■■■ 41
HDAC4-216ENST00000544989 DOCK3Q8IZD9 2030 aa13.98□□□□□ -0.17
HDAC4-216ENST00000544989 RAD50Q92878 1312 aa13.98□□□□□ -0.17
HDAC4-216ENST00000544989 F5H6K3 240 aa13.98□□□□□ -0.17
HDAC4-216ENST00000544989 FDX1P10109 184 aa13.98□□□□□ -0.17
HDAC4-216ENST00000544989 KLRC3Q07444 240 aa13.98□□□□□ -0.17
HDAC4-216ENST00000544989 KIAA1755Q5JYT7 1200 aa13.98□□□□□ -0.17
HDAC4-216ENST00000544989 MORN1Q5T089 497 aa13.98□□□□□ -0.17
HDAC4-216ENST00000544989 WDR78Q5VTH9 848 aa13.98□□□□□ -0.17
HDAC4-216ENST00000544989 ZNF589Q86UQ0 364 aaPredicted RBP13.98□□□□□ -0.17
HDAC4-216ENST00000544989 DSCC1Q9BVC3 393 aa13.98□□□□□ -0.17
HDAC4-216ENST00000544989 BTBD7Q9P203 1132 aa13.98□□□□□ -0.17
HDAC4-216ENST00000544989 CTNNA3Q9UI47 895 aa13.98□□□□□ -0.17
HDAC4-216ENST00000544989 PPP1R9AQ9ULJ8 1098 aa13.98□□□□□ -0.17
HDAC4-216ENST00000544989 ADAMTS5Q9UNA0 930 aa13.98□□□□□ -0.17
HDAC4-216ENST00000544989 LAMA3Q16787 3333 aa13.97□□□□□ -0.17
HDAC4-216ENST00000544989 RANBP6O60518 1105 aaKnown RBP13.97□□□□□ -0.17
HDAC4-216ENST00000544989 NDUFB10O96000 172 aa13.97□□□□□ -0.17
HDAC4-216ENST00000544989 ELNP15502 786 aa13.97□□□□□ -0.17
HDAC4-216ENST00000544989 ZKSCAN1P17029 563 aaPredicted RBP13.97□□□□□ -0.17
HDAC4-216ENST00000544989 CYP2B6P20813 491 aa13.97□□□□□ -0.17
HDAC4-216ENST00000544989 PTPREP23469 700 aa13.97□□□□□ -0.17
HDAC4-216ENST00000544989 PDE4AP27815 886 aa13.97□□□□□ -0.17
HDAC4-216ENST00000544989 GJA8P48165 433 aa13.97□□□□□ -0.17
HDAC4-216ENST00000544989 CTDSPL2Q05D32 466 aa13.97□□□□□ -0.17
HDAC4-216ENST00000544989 MAP2K5Q13163 448 aa13.97□□□□□ -0.17
HDAC4-216ENST00000544989 MTFR1Q15390 333 aa13.97□□□□□ -0.17
HDAC4-216ENST00000544989 FAM47AQ5JRC9 791 aa13.97□□□□□ -0.17
HDAC4-216ENST00000544989 FAM83BQ5T0W9 1011 aa13.97□□□□□ -0.17
HDAC4-216ENST00000544989 POTEEQ6S8J3 1075 aa13.97□□□□□ -0.17
HDAC4-216ENST00000544989 MFSD6Q6ZSS7 791 aa13.97□□□□□ -0.17
HDAC4-216ENST00000544989 ABRAQ8N0Z2 381 aa13.97□□□□□ -0.17
HDAC4-216ENST00000544989 PRPF38AQ8NAV1 312 aaKnown RBP13.97□□□□□ -0.17
HDAC4-216ENST00000544989 USP6NLQ92738 828 aa13.97□□□□□ -0.17
HDAC4-216ENST00000544989 SLF1Q9BQI6 1058 aa13.97□□□□□ -0.17
HDAC4-216ENST00000544989 MOV10L1Q9BXT6 1211 aaKnown RBP13.97□□□□□ -0.17
HDAC4-216ENST00000544989 TOMM22Q9NS69 142 aa13.97□□□□□ -0.17
HDAC4-216ENST00000544989 FEM1BQ9UK73 627 aa13.97□□□□□ -0.17
HDAC4-216ENST00000544989 CTDP1Q9Y5B0 961 aaPredicted RBP13.97□□□□□ -0.17
HDAC4-216ENST00000544989 RPTORQ8N122 1335 aa13.96□□□□□ -0.17
HDAC4-216ENST00000544989 VWA5AO00534 786 aa13.96□□□□□ -0.17
HDAC4-216ENST00000544989 ZNF213O14771 459 aa13.96□□□□□ -0.17
HDAC4-216ENST00000544989 MYCP01106 439 aaPredicted RBP13.96□□□□□ -0.17
HDAC4-216ENST00000544989 HOXC6P09630 235 aa13.96□□□□□ -0.17
HDAC4-216ENST00000544989 EN2P19622 333 aaPredicted RBP13.96□□□□□ -0.17
HDAC4-216ENST00000544989 GRB14Q14449 540 aa13.96□□□□□ -0.17
HDAC4-216ENST00000544989 PLS1Q14651 629 aa13.96□□□□□ -0.17
HDAC4-216ENST00000544989 CCDC178Q5BJE1 867 aa13.96□□□□□ -0.17
HDAC4-216ENST00000544989 AKNAD1Q5T1N1 836 aa13.96□□□□□ -0.17
HDAC4-216ENST00000544989 CENPQQ7L2Z9 268 aaPredicted RBP13.96□□□□□ -0.17
HDAC4-216ENST00000544989 STAG1Q8WVM7 1258 aa13.96□□□□□ -0.17
HDAC4-216ENST00000544989 ATG4CQ96DT6 458 aa13.96□□□□□ -0.17
HDAC4-216ENST00000544989 GMCL1Q96IK5 515 aa13.96□□□□□ -0.17
HDAC4-216ENST00000544989 TCP11L1Q9NUJ3 509 aa13.96□□□□□ -0.17
HDAC4-216ENST00000544989 STX8Q9UNK0 236 aa13.96□□□□□ -0.17
HDAC4-216ENST00000544989 PEX10O60683 326 aa13.95□□□□□ -0.18
HDAC4-216ENST00000544989 ZBED4O75132 1171 aa13.95□□□□□ -0.18
HDAC4-216ENST00000544989 ERCC3P19447 782 aa13.95□□□□□ -0.18
HDAC4-216ENST00000544989 IMMTQ16891 758 aaKnown RBP13.95□□□□□ -0.18
HDAC4-216ENST00000544989 MFSD14CQ5VZR4 134 aa13.95□□□□□ -0.18
HDAC4-216ENST00000544989 SLFN13Q68D06 897 aa13.95□□□□□ -0.18
HDAC4-216ENST00000544989 FAM160B2Q86V87 743 aa13.95□□□□□ -0.18
HDAC4-216ENST00000544989 CHURC1Q8WUH1 139 aa13.95□□□□□ -0.18
HDAC4-216ENST00000544989 ESR2Q92731 530 aa13.95□□□□□ -0.18
HDAC4-216ENST00000544989 UNC93B1Q9H1C4 597 aa13.95□□□□□ -0.18
HDAC4-216ENST00000544989 HMX1Q9NP08 348 aaPredicted RBP13.95□□□□□ -0.18
HDAC4-216ENST00000544989 PAK6Q9NQU5 681 aaPredicted RBP13.95□□□□□ -0.18
HDAC4-216ENST00000544989 A0A0G2JMZ2 1700 aa13.94□□□□□ -0.18
HDAC4-216ENST00000544989 ATP2A1O14983 1001 aa13.94□□□□□ -0.18
HDAC4-216ENST00000544989 PLA2G6O60733 806 aa13.94□□□□□ -0.18
HDAC4-216ENST00000544989 SGPL1O95470 568 aa13.94□□□□□ -0.18
HDAC4-216ENST00000544989 FCER1AP12319 257 aa13.94□□□□□ -0.18
HDAC4-216ENST00000544989 BMP3P12645 472 aa13.94□□□□□ -0.18
HDAC4-216ENST00000544989 GSPT1P15170 499 aaKnown RBP13.94□□□□□ -0.18
HDAC4-216ENST00000544989 STAT3P40763 770 aa13.94□□□□□ -0.18
HDAC4-216ENST00000544989 SLC1A4P43007 532 aa13.94□□□□□ -0.18
HDAC4-216ENST00000544989 NOVP48745 357 aa13.94□□□□□ -0.18
HDAC4-216ENST00000544989 OAZ1P54368 228 aa13.94□□□□□ -0.18
HDAC4-216ENST00000544989 TMEM132BQ14DG7 1078 aa13.94□□□□□ -0.18
HDAC4-216ENST00000544989 RRP12Q5JTH9 1297 aaKnown RBP13.94□□□□□ -0.18
HDAC4-216ENST00000544989 SAMD1Q6SPF0 538 aaPredicted RBP13.94□□□□□ -0.18
HDAC4-216ENST00000544989 DPP9Q86TI2 863 aa13.94□□□□□ -0.18
HDAC4-216ENST00000544989 NCAPG2Q86XI2 1143 aa13.94□□□□□ -0.18
HDAC4-216ENST00000544989 RIOX2Q8IUF8 465 aa13.94□□□□□ -0.18
HDAC4-216ENST00000544989 U2AF1L4Q8WU68 220 aaKnown RBP13.94□□□□□ -0.18
HDAC4-216ENST00000544989 TRIB2Q92519 343 aa13.94□□□□□ -0.18
HDAC4-216ENST00000544989 TTC14Q96N46 770 aa13.94□□□□□ -0.18
HDAC4-216ENST00000544989 TEX13BQ9BXU2 312 aa13.94□□□□□ -0.18
HDAC4-216ENST00000544989 RLFQ13129 1914 aa13.94□□□□□ -0.18
HDAC4-216ENST00000544989 MYH4Q9Y623 1939 aa13.94□□□□□ -0.18
HDAC4-216ENST00000544989 PRKAR2AP13861 404 aaKnown RBP13.93□□□□□ -0.18
HDAC4-216ENST00000544989 STAT2P52630 851 aa13.93□□□□□ -0.18
HDAC4-216ENST00000544989 MAP3K21Q5TCX8 1036 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms