RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 NUBP1P53384 320 aa15.31■□□□□ 0.04
DDX11-227ENST00000544652 RCAN1P53805 252 aa15.31■□□□□ 0.04
DDX11-227ENST00000544652 HTRA3P83110 453 aa15.31■□□□□ 0.04
DDX11-227ENST00000544652 FGD1P98174 961 aa15.31■□□□□ 0.04
DDX11-227ENST00000544652 NOGQ13253 232 aa15.31■□□□□ 0.04
DDX11-227ENST00000544652 DGKZQ13574 1117 aa15.31■□□□□ 0.04
DDX11-227ENST00000544652 ZYXQ15942 572 aaKnown RBP15.31■□□□□ 0.04
DDX11-227ENST00000544652 SLFN13Q68D06 897 aa15.31■□□□□ 0.04
DDX11-227ENST00000544652 APOA5Q6Q788 366 aa15.31■□□□□ 0.04
DDX11-227ENST00000544652 FASTKD5Q7L8L6 764 aaKnown RBP15.31■□□□□ 0.04
DDX11-227ENST00000544652 DCAF4Q8WV16 495 aa15.31■□□□□ 0.04
DDX11-227ENST00000544652 TMOD4Q9NZQ9 345 aa15.31■□□□□ 0.04
DDX11-227ENST00000544652 RBBP6Q7Z6E9 1792 aaKnown RBP15.31■□□□□ 0.04
DDX11-227ENST00000544652 BAZ2BQ9UIF8 2168 aaKnown RBP15.31■□□□□ 0.04
DDX11-227ENST00000544652 CALM1P0DP23 149 aa15.3■□□□□ 0.04
DDX11-227ENST00000544652 CALM2P0DP24 149 aa15.3■□□□□ 0.04
DDX11-227ENST00000544652 CALM3P0DP25 149 aa15.3■□□□□ 0.04
DDX11-227ENST00000544652 VCAM1P19320 739 aa15.3■□□□□ 0.04
DDX11-227ENST00000544652 INHBEP58166 350 aa15.3■□□□□ 0.04
DDX11-227ENST00000544652 APOBRQ0VD83 1088 aa15.3■□□□□ 0.04
DDX11-227ENST00000544652 MKRN3Q13064 507 aaKnown RBP15.3■□□□□ 0.04
DDX11-227ENST00000544652 GPAT2Q6NUI2 795 aa15.3■□□□□ 0.04
DDX11-227ENST00000544652 NFXL1Q6ZNB6 911 aa15.3■□□□□ 0.04
DDX11-227ENST00000544652 CATIPQ7Z7H3 387 aa15.3■□□□□ 0.04
DDX11-227ENST00000544652 BRI3BPQ8WY22 251 aa15.3■□□□□ 0.04
DDX11-227ENST00000544652 RNF25Q96BH1 459 aaPredicted RBP15.3■□□□□ 0.04
DDX11-227ENST00000544652 ZNF274Q96GC6 653 aaPredicted RBP15.3■□□□□ 0.04
DDX11-227ENST00000544652 WDR33Q9C0J8 1336 aaKnown RBP15.3■□□□□ 0.04
DDX11-227ENST00000544652 AGTPBP1Q9UPW5 1226 aa15.3■□□□□ 0.04
DDX11-227ENST00000544652 SLC12A7Q9Y666 1083 aa15.3■□□□□ 0.04
DDX11-227ENST00000544652 ZNFX1Q9P2E3 1918 aaKnown RBP15.29■□□□□ 0.04
DDX11-227ENST00000544652 CCL15-CCL14A0A0B4J2E2 113 aa15.29■□□□□ 0.04
DDX11-227ENST00000544652 KLF18A0A0U1RQI7 1052 aa15.29■□□□□ 0.04
DDX11-227ENST00000544652 ST18O60284 1047 aa15.29■□□□□ 0.04
DDX11-227ENST00000544652 HOXA7P31268 230 aaPredicted RBP15.29■□□□□ 0.04
DDX11-227ENST00000544652 TM4SF4P48230 202 aa15.29■□□□□ 0.04
DDX11-227ENST00000544652 GRM4Q14833 912 aa15.29■□□□□ 0.04
DDX11-227ENST00000544652 CCL15Q16663 113 aa15.29■□□□□ 0.04
DDX11-227ENST00000544652 REM2Q8IYK8 340 aaPredicted RBP15.29■□□□□ 0.04
DDX11-227ENST00000544652 SPICE1Q8N0Z3 855 aa15.29■□□□□ 0.04
DDX11-227ENST00000544652 PTPN18Q99952 460 aa15.29■□□□□ 0.04
DDX11-227ENST00000544652 SLC45A1Q9Y2W3 748 aa15.29■□□□□ 0.04
DDX11-227ENST00000544652 PALM3A6NDB9 673 aaPredicted RBP15.28■□□□□ 0.04
DDX11-227ENST00000544652 RIOK3O14730 519 aaKnown RBP15.28■□□□□ 0.04
DDX11-227ENST00000544652 ZBTB43O43298 467 aa15.28■□□□□ 0.04
DDX11-227ENST00000544652 PLA2G6O60733 806 aa15.28■□□□□ 0.04
DDX11-227ENST00000544652 BMP3P12645 472 aa15.28■□□□□ 0.04
DDX11-227ENST00000544652 PDIA3P30101 505 aaKnown RBP15.28■□□□□ 0.04
DDX11-227ENST00000544652 MAP2K2P36507 400 aa15.28■□□□□ 0.04
DDX11-227ENST00000544652 SLC1A4P43007 532 aa15.28■□□□□ 0.04
DDX11-227ENST00000544652 VEGFBP49765 207 aa15.28■□□□□ 0.04
DDX11-227ENST00000544652 ZNF543Q08ER8 600 aa15.28■□□□□ 0.04
DDX11-227ENST00000544652 NBR1Q14596 966 aa15.28■□□□□ 0.04
DDX11-227ENST00000544652 ASPRV1Q53RT3 343 aa15.28■□□□□ 0.04
DDX11-227ENST00000544652 TREML2Q5T2D2 321 aa15.28■□□□□ 0.04
DDX11-227ENST00000544652 GPATCH4Q5T3I0 446 aaKnown RBP15.28■□□□□ 0.04
DDX11-227ENST00000544652 GADL1Q6ZQY3 521 aa15.28■□□□□ 0.04
DDX11-227ENST00000544652 RASGRP2Q7LDG7 609 aa15.28■□□□□ 0.04
DDX11-227ENST00000544652 ANKRD23Q86SG2 305 aa15.28■□□□□ 0.04
DDX11-227ENST00000544652 ZIC5Q96T25 663 aa15.28■□□□□ 0.04
DDX11-227ENST00000544652 MYL10Q9BUA6 226 aa15.28■□□□□ 0.04
DDX11-227ENST00000544652 ZCCHC17Q9NP64 241 aaKnown RBP15.28■□□□□ 0.04
DDX11-227ENST00000544652 TPCN1Q9ULQ1 816 aa15.28■□□□□ 0.04
DDX11-227ENST00000544652 HPS5Q9UPZ3 1129 aa15.28■□□□□ 0.04
DDX11-227ENST00000544652 BTBD19C9JJ37 291 aa15.27■□□□□ 0.04
DDX11-227ENST00000544652 CD2BP2O95400 341 aaKnown RBP15.27■□□□□ 0.04
DDX11-227ENST00000544652 MCM2P49736 904 aa15.27■□□□□ 0.04
DDX11-227ENST00000544652 KIF23Q02241 960 aaPredicted RBP15.27■□□□□ 0.04
DDX11-227ENST00000544652 SREBF2Q12772 1141 aa15.27■□□□□ 0.04
DDX11-227ENST00000544652 PPP2R5BQ15173 497 aa15.27■□□□□ 0.04
DDX11-227ENST00000544652 FAM83BQ5T0W9 1011 aa15.27■□□□□ 0.04
DDX11-227ENST00000544652 BTNL9Q6UXG8 535 aa15.27■□□□□ 0.04
DDX11-227ENST00000544652 SYNE3Q6ZMZ3 975 aa15.27■□□□□ 0.04
DDX11-227ENST00000544652 CATSPERGQ6ZRH7 1159 aa15.27■□□□□ 0.04
DDX11-227ENST00000544652 FANCBQ8NB91 859 aa15.27■□□□□ 0.04
DDX11-227ENST00000544652 NUP88Q99567 741 aaPredicted RBP15.27■□□□□ 0.04
DDX11-227ENST00000544652 RPAP3Q9H6T3 665 aaPredicted RBP15.27■□□□□ 0.04
DDX11-227ENST00000544652 MAD2L2Q9UI95 211 aa15.27■□□□□ 0.04
DDX11-227ENST00000544652 LIMCH1Q9UPQ0 1083 aa15.27■□□□□ 0.04
DDX11-227ENST00000544652 MYPNQ86TC9 1320 aa15.26■□□□□ 0.03
DDX11-227ENST00000544652 USP17L15C9J2P7 530 aa15.26■□□□□ 0.03
DDX11-227ENST00000544652 USP17L13C9JLJ4 530 aa15.26■□□□□ 0.03
DDX11-227ENST00000544652 USP17L11C9JVI0 530 aa15.26■□□□□ 0.03
DDX11-227ENST00000544652 USP17L18D6R9N7 530 aa15.26■□□□□ 0.03
DDX11-227ENST00000544652 USP17L22D6RA61 530 aa15.26■□□□□ 0.03
DDX11-227ENST00000544652 USP17L17D6RBQ6 530 aa15.26■□□□□ 0.03
DDX11-227ENST00000544652 USP17L19D6RCP7 530 aa15.26■□□□□ 0.03
DDX11-227ENST00000544652 USP17L20D6RJB6 530 aa15.26■□□□□ 0.03
DDX11-227ENST00000544652 AOC2O75106 756 aa15.26■□□□□ 0.03
DDX11-227ENST00000544652 PARP1P09874 1014 aaKnown RBP15.26■□□□□ 0.03
DDX11-227ENST00000544652 PRR29P0C7W0 189 aa15.26■□□□□ 0.03
DDX11-227ENST00000544652 USP17L24Q0WX57 530 aa15.26■□□□□ 0.03
DDX11-227ENST00000544652 PABPC4Q13310 644 aaKnown RBP eCLIP15.26■□□□□ 0.03
DDX11-227ENST00000544652 ME3Q16798 604 aa15.26■□□□□ 0.03
DDX11-227ENST00000544652 MICU3Q86XE3 530 aa15.26■□□□□ 0.03
DDX11-227ENST00000544652 IFNL1Q8IU54 200 aa15.26■□□□□ 0.03
DDX11-227ENST00000544652 FAM43AQ8N2R8 423 aa15.26■□□□□ 0.03
DDX11-227ENST00000544652 NUP133Q8WUM0 1156 aa15.26■□□□□ 0.03
DDX11-227ENST00000544652 SNX21Q969T3 373 aa15.26■□□□□ 0.03
DDX11-227ENST00000544652 FAM212AQ96EL1 285 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms