RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 CATIPQ7Z7H3 387 aa24.33■■□□□ 1.49
OTUB1-211ENST00000543004 MICU3Q86XE3 530 aa24.33■■□□□ 1.49
OTUB1-211ENST00000543004 LPAR1Q92633 364 aa24.33■■□□□ 1.49
OTUB1-211ENST00000543004 SNHG28P0DPA3 235 aa24.32■■□□□ 1.48
OTUB1-211ENST00000543004 SLC1A4P43007 532 aa24.32■■□□□ 1.48
OTUB1-211ENST00000543004 FASTKD5Q7L8L6 764 aaKnown RBP24.32■■□□□ 1.48
OTUB1-211ENST00000543004 GMCL1Q96IK5 515 aa24.32■■□□□ 1.48
OTUB1-211ENST00000543004 TPCN1Q9ULQ1 816 aa24.32■■□□□ 1.48
OTUB1-211ENST00000543004 ISY1Q9ULR0 285 aaKnown RBP24.32■■□□□ 1.48
OTUB1-211ENST00000543004 THSD7BQ9C0I4 1608 aa24.32■■□□□ 1.48
OTUB1-211ENST00000543004 CCDC96Q2M329 555 aa24.32■■□□□ 1.48
OTUB1-211ENST00000543004 TTBK2Q6IQ55 1244 aa24.32■■□□□ 1.48
OTUB1-211ENST00000543004 STAG2Q8N3U4 1231 aa24.32■■□□□ 1.48
OTUB1-211ENST00000543004 CPVLQ9H3G5 476 aa24.32■■□□□ 1.48
OTUB1-211ENST00000543004 GPCPD1Q9NPB8 672 aa24.32■■□□□ 1.48
OTUB1-211ENST00000543004 FBXO28Q9NVF7 368 aa24.32■■□□□ 1.48
OTUB1-211ENST00000543004 AGTPBP1Q9UPW5 1226 aa24.32■■□□□ 1.48
OTUB1-211ENST00000543004 WDR46O15213 610 aaKnown RBP24.31■■□□□ 1.48
OTUB1-211ENST00000543004 BMP3P12645 472 aa24.31■■□□□ 1.48
OTUB1-211ENST00000543004 TANGO6Q9C0B7 1094 aa24.31■■□□□ 1.48
OTUB1-211ENST00000543004 HPS5Q9UPZ3 1129 aa24.31■■□□□ 1.48
OTUB1-211ENST00000543004 GOLGA8BA8MQT2 603 aa24.3■■□□□ 1.48
OTUB1-211ENST00000543004 LARGE1O95461 756 aa24.3■■□□□ 1.48
OTUB1-211ENST00000543004 EVCP57679 992 aa24.3■■□□□ 1.48
OTUB1-211ENST00000543004 ZNF543Q08ER8 600 aa24.3■■□□□ 1.48
OTUB1-211ENST00000543004 SAMD1Q6SPF0 538 aaPredicted RBP24.3■■□□□ 1.48
OTUB1-211ENST00000543004 DCAF4Q8WV16 495 aa24.3■■□□□ 1.48
OTUB1-211ENST00000543004 MAD2L2Q9UI95 211 aa24.3■■□□□ 1.48
OTUB1-211ENST00000543004 PDHXO00330 501 aa24.29■■□□□ 1.48
OTUB1-211ENST00000543004 ZBTB43O43298 467 aa24.29■■□□□ 1.48
OTUB1-211ENST00000543004 DDAH1O94760 285 aa24.29■■□□□ 1.48
OTUB1-211ENST00000543004 PDIA3P30101 505 aaKnown RBP24.29■■□□□ 1.48
OTUB1-211ENST00000543004 SLC16A2P36021 539 aa24.29■■□□□ 1.48
OTUB1-211ENST00000543004 TM4SF4P48230 202 aa24.29■■□□□ 1.48
OTUB1-211ENST00000543004 STK3Q13188 491 aa24.29■■□□□ 1.48
OTUB1-211ENST00000543004 GRM4Q14833 912 aa24.29■■□□□ 1.48
OTUB1-211ENST00000543004 IFNL1Q8IU54 200 aa24.29■■□□□ 1.48
OTUB1-211ENST00000543004 DNAJC5GQ8N7S2 189 aa24.29■■□□□ 1.48
OTUB1-211ENST00000543004 BAZ2BQ9UIF8 2168 aaKnown RBP24.29■■□□□ 1.48
OTUB1-211ENST00000543004 TMEM232C9JQI7 657 aa24.28■■□□□ 1.48
OTUB1-211ENST00000543004 SYNE3Q6ZMZ3 975 aa24.28■■□□□ 1.48
OTUB1-211ENST00000543004 CATSPERGQ6ZRH7 1159 aa24.28■■□□□ 1.48
OTUB1-211ENST00000543004 ANKRD23Q86SG2 305 aa24.28■■□□□ 1.48
OTUB1-211ENST00000543004 PARP1P09874 1014 aaKnown RBP24.28■■□□□ 1.48
OTUB1-211ENST00000543004 CYP2C8P10632 490 aa24.28■■□□□ 1.48
OTUB1-211ENST00000543004 CCT2P78371 535 aaKnown RBP24.28■■□□□ 1.48
OTUB1-211ENST00000543004 SREBF2Q12772 1141 aa24.28■■□□□ 1.48
OTUB1-211ENST00000543004 ANKRD1Q15327 319 aa24.28■■□□□ 1.48
OTUB1-211ENST00000543004 CMTR1Q8N1G2 835 aaKnown RBP24.28■■□□□ 1.48
OTUB1-211ENST00000543004 UBA5Q9GZZ9 404 aa24.28■■□□□ 1.48
OTUB1-211ENST00000543004 NCOA5Q9HCD5 579 aaKnown RBP24.28■■□□□ 1.48
OTUB1-211ENST00000543004 PALM3A6NDB9 673 aaPredicted RBP24.27■■□□□ 1.48
OTUB1-211ENST00000543004 USP17L15C9J2P7 530 aa24.27■■□□□ 1.48
OTUB1-211ENST00000543004 USP17L13C9JLJ4 530 aa24.27■■□□□ 1.48
OTUB1-211ENST00000543004 USP17L11C9JVI0 530 aa24.27■■□□□ 1.48
OTUB1-211ENST00000543004 USP17L18D6R9N7 530 aa24.27■■□□□ 1.48
OTUB1-211ENST00000543004 USP17L22D6RA61 530 aa24.27■■□□□ 1.48
OTUB1-211ENST00000543004 USP17L17D6RBQ6 530 aa24.27■■□□□ 1.48
OTUB1-211ENST00000543004 USP17L19D6RCP7 530 aa24.27■■□□□ 1.48
OTUB1-211ENST00000543004 USP17L20D6RJB6 530 aa24.27■■□□□ 1.48
OTUB1-211ENST00000543004 ST18O60284 1047 aa24.27■■□□□ 1.48
OTUB1-211ENST00000543004 DTNBO60941 627 aa24.27■■□□□ 1.48
OTUB1-211ENST00000543004 CDC27P30260 824 aa24.27■■□□□ 1.48
OTUB1-211ENST00000543004 HOXA7P31268 230 aaPredicted RBP24.27■■□□□ 1.48
OTUB1-211ENST00000543004 MAP2K2P36507 400 aa24.27■■□□□ 1.48
OTUB1-211ENST00000543004 INHBEP58166 350 aa24.27■■□□□ 1.48
OTUB1-211ENST00000543004 USP17L24Q0WX57 530 aa24.27■■□□□ 1.48
OTUB1-211ENST00000543004 ME3Q16798 604 aa24.27■■□□□ 1.48
OTUB1-211ENST00000543004 SLC35G1Q2M3R5 365 aa24.27■■□□□ 1.48
OTUB1-211ENST00000543004 NBPF11Q86T75 865 aa24.27■■□□□ 1.48
OTUB1-211ENST00000543004 FANCBQ8NB91 859 aa24.27■■□□□ 1.48
OTUB1-211ENST00000543004 ASCC2Q9H1I8 757 aaPredicted RBP24.27■■□□□ 1.48
OTUB1-211ENST00000543004 FAM217BQ9NTX9 383 aaPredicted RBP24.27■■□□□ 1.48
OTUB1-211ENST00000543004 COL11A1P12107 1806 aaPredicted RBP24.27■■□□□ 1.48
OTUB1-211ENST00000543004 GOLGA8AA7E2F4 631 aa24.26■■□□□ 1.47
OTUB1-211ENST00000543004 FLOT1O75955 427 aa24.26■■□□□ 1.47
OTUB1-211ENST00000543004 PLEKHA8P1O95397 391 aa24.26■■□□□ 1.47
OTUB1-211ENST00000543004 POTEEQ6S8J3 1075 aa24.26■■□□□ 1.47
OTUB1-211ENST00000543004 P2RX7Q99572 595 aaKnown RBP24.26■■□□□ 1.47
OTUB1-211ENST00000543004 PEX10O60683 326 aa24.25■■□□□ 1.47
OTUB1-211ENST00000543004 ADD1P35611 737 aaKnown RBP24.25■■□□□ 1.47
OTUB1-211ENST00000543004 METAP2P50579 478 aaKnown RBP eCLIP24.25■■□□□ 1.47
OTUB1-211ENST00000543004 NECAB1Q8N987 351 aa24.25■■□□□ 1.47
OTUB1-211ENST00000543004 CTCFLQ8NI51 663 aaPredicted RBP24.25■■□□□ 1.47
OTUB1-211ENST00000543004 ZNF274Q96GC6 653 aaPredicted RBP24.25■■□□□ 1.47
OTUB1-211ENST00000543004 KLRF2D3W0D1 207 aa24.24■■□□□ 1.47
OTUB1-211ENST00000543004 CALM1P0DP23 149 aa24.24■■□□□ 1.47
OTUB1-211ENST00000543004 CALM2P0DP24 149 aa24.24■■□□□ 1.47
OTUB1-211ENST00000543004 CALM3P0DP25 149 aa24.24■■□□□ 1.47
OTUB1-211ENST00000543004 SNAP25P60880 206 aa24.24■■□□□ 1.47
OTUB1-211ENST00000543004 IKQ13123 557 aaPredicted RBP24.24■■□□□ 1.47
OTUB1-211ENST00000543004 ASPRV1Q53RT3 343 aa24.24■■□□□ 1.47
OTUB1-211ENST00000543004 KIFC2Q96AC6 838 aa24.24■■□□□ 1.47
OTUB1-211ENST00000543004 LIMCH1Q9UPQ0 1083 aa24.24■■□□□ 1.47
OTUB1-211ENST00000543004 STAT2P52630 851 aa24.24■■□□□ 1.47
OTUB1-211ENST00000543004 IRX3P78415 501 aaPredicted RBP24.24■■□□□ 1.47
OTUB1-211ENST00000543004 RTN1Q16799 776 aa24.24■■□□□ 1.47
OTUB1-211ENST00000543004 GPATCH4Q5T3I0 446 aaKnown RBP24.24■■□□□ 1.47
OTUB1-211ENST00000543004 CCDC82Q8N4S0 544 aa24.24■■□□□ 1.47
OTUB1-211ENST00000543004 MAP3K14Q99558 947 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms