RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 CD320Q9NPF0 282 aa5.93□□□□□ -1.46
LIMS1-214ENST00000542845 STARD7Q9NQZ5 370 aa5.93□□□□□ -1.46
LIMS1-214ENST00000542845 BTBD7Q9P203 1132 aa5.93□□□□□ -1.46
LIMS1-214ENST00000542845 DENND2AQ9ULE3 1009 aa5.93□□□□□ -1.46
LIMS1-214ENST00000542845 YBX2Q9Y2T7 364 aaKnown RBP5.93□□□□□ -1.46
LIMS1-214ENST00000542845 RABGAP1Q9Y3P9 1069 aa5.93□□□□□ -1.46
LIMS1-214ENST00000542845 CDK5RAP2Q96SN8 1893 aa5.93□□□□□ -1.46
LIMS1-214ENST00000542845 ZBBXA8MT70 800 aa5.92□□□□□ -1.46
LIMS1-214ENST00000542845 PRR33A8MZF0 331 aa5.92□□□□□ -1.46
LIMS1-214ENST00000542845 USP17L15C9J2P7 530 aa5.92□□□□□ -1.46
LIMS1-214ENST00000542845 USP17L13C9JLJ4 530 aa5.92□□□□□ -1.46
LIMS1-214ENST00000542845 USP17L11C9JVI0 530 aa5.92□□□□□ -1.46
LIMS1-214ENST00000542845 USP17L18D6R9N7 530 aa5.92□□□□□ -1.46
LIMS1-214ENST00000542845 USP17L22D6RA61 530 aa5.92□□□□□ -1.46
LIMS1-214ENST00000542845 USP17L17D6RBQ6 530 aa5.92□□□□□ -1.46
LIMS1-214ENST00000542845 USP17L19D6RCP7 530 aa5.92□□□□□ -1.46
LIMS1-214ENST00000542845 USP17L20D6RJB6 530 aa5.92□□□□□ -1.46
LIMS1-214ENST00000542845 MAP3K7O43318 606 aa5.92□□□□□ -1.46
LIMS1-214ENST00000542845 FGBP02675 491 aa5.92□□□□□ -1.46
LIMS1-214ENST00000542845 ASNSP08243 561 aa5.92□□□□□ -1.46
LIMS1-214ENST00000542845 RARBP10826 455 aa5.92□□□□□ -1.46
LIMS1-214ENST00000542845 ADORA2AP29274 412 aa5.92□□□□□ -1.46
LIMS1-214ENST00000542845 SSTR3P32745 418 aaPredicted RBP5.92□□□□□ -1.46
LIMS1-214ENST00000542845 PHKA1P46020 1223 aa5.92□□□□□ -1.46
LIMS1-214ENST00000542845 USP17L24Q0WX57 530 aa5.92□□□□□ -1.46
LIMS1-214ENST00000542845 PLS1Q14651 629 aa5.92□□□□□ -1.46
LIMS1-214ENST00000542845 RALBP1Q15311 655 aa5.92□□□□□ -1.46
LIMS1-214ENST00000542845 ATP2B3Q16720 1220 aa5.92□□□□□ -1.46
LIMS1-214ENST00000542845 C1orf53Q5VUE5 145 aa5.92□□□□□ -1.46
LIMS1-214ENST00000542845 USP17L2Q6R6M4 530 aa5.92□□□□□ -1.46
LIMS1-214ENST00000542845 TEX11Q8IYF3 940 aa5.92□□□□□ -1.46
LIMS1-214ENST00000542845 HLA-CQ95604 372 aa5.92□□□□□ -1.46
LIMS1-214ENST00000542845 FBXL18Q96ME1 805 aa5.92□□□□□ -1.46
LIMS1-214ENST00000542845 FEZ1Q99689 392 aa5.92□□□□□ -1.46
LIMS1-214ENST00000542845 SIL1Q9H173 461 aa5.92□□□□□ -1.46
LIMS1-214ENST00000542845 COG5Q9UP83 839 aa5.92□□□□□ -1.46
LIMS1-214ENST00000542845 PHF24Q9UPV7 400 aa5.92□□□□□ -1.46
LIMS1-214ENST00000542845 ZNFX1Q9P2E3 1918 aaKnown RBP5.91□□□□□ -1.46
LIMS1-214ENST00000542845 CACNA1FO60840 1977 aa5.91□□□□□ -1.46
LIMS1-214ENST00000542845 BDP1A6H8Y1 2624 aa5.91□□□□□ -1.46
LIMS1-214ENST00000542845 COBLO75128 1261 aa5.91□□□□□ -1.46
LIMS1-214ENST00000542845 HOXC6P09630 235 aa5.91□□□□□ -1.46
LIMS1-214ENST00000542845 CYP2C18P33260 490 aa5.91□□□□□ -1.46
LIMS1-214ENST00000542845 MECOMQ03112 1051 aa5.91□□□□□ -1.46
LIMS1-214ENST00000542845 GRB14Q14449 540 aa5.91□□□□□ -1.46
LIMS1-214ENST00000542845 RAB3GAP1Q15042 981 aa5.91□□□□□ -1.46
LIMS1-214ENST00000542845 OLFML2BQ68BL8 750 aa5.91□□□□□ -1.46
LIMS1-214ENST00000542845 SPTY2D1Q68D10 685 aaPredicted RBP5.91□□□□□ -1.46
LIMS1-214ENST00000542845 PSRC1Q6PGN9 363 aaPredicted RBP5.91□□□□□ -1.46
LIMS1-214ENST00000542845 NCAPG2Q86XI2 1143 aa5.91□□□□□ -1.46
LIMS1-214ENST00000542845 ZGPATQ8N5A5 531 aaKnown RBP5.91□□□□□ -1.46
LIMS1-214ENST00000542845 OXER1Q8TDS5 423 aa5.91□□□□□ -1.46
LIMS1-214ENST00000542845 NUP133Q8WUM0 1156 aa5.91□□□□□ -1.46
LIMS1-214ENST00000542845 ANKS1AQ92625 1134 aa5.91□□□□□ -1.46
LIMS1-214ENST00000542845 LENG1Q96BZ8 264 aaPredicted RBP5.91□□□□□ -1.46
LIMS1-214ENST00000542845 PHOX2BQ99453 314 aa5.91□□□□□ -1.46
LIMS1-214ENST00000542845 MTIF3Q9H2K0 278 aaKnown RBP5.91□□□□□ -1.46
LIMS1-214ENST00000542845 SLC5A4Q9NY91 659 aa5.91□□□□□ -1.46
LIMS1-214ENST00000542845 HERC5Q9UII4 1024 aaKnown RBP5.91□□□□□ -1.46
LIMS1-214ENST00000542845 SALL2Q9Y467 1007 aaPredicted RBP5.91□□□□□ -1.46
LIMS1-214ENST00000542845 MTCH2Q9Y6C9 303 aa5.91□□□□□ -1.46
LIMS1-214ENST00000542845 MROH7-TTC4A0A0A0MT08 1334 aa5.91□□□□□ -1.46
LIMS1-214ENST00000542845 GAKO14976 1311 aa5.91□□□□□ -1.46
LIMS1-214ENST00000542845 GPR75-ASB3A0A0A6YYF3 556 aa5.9□□□□□ -1.46
LIMS1-214ENST00000542845 EYA2O00167 538 aa5.9□□□□□ -1.46
LIMS1-214ENST00000542845 STRNO43815 780 aa5.9□□□□□ -1.46
LIMS1-214ENST00000542845 ALDH1L1O75891 902 aa5.9□□□□□ -1.46
LIMS1-214ENST00000542845 LDHCP07864 332 aa5.9□□□□□ -1.46
LIMS1-214ENST00000542845 HOXB3P14651 431 aaPredicted RBP5.9□□□□□ -1.46
LIMS1-214ENST00000542845 TAL1P17542 331 aaPredicted RBP5.9□□□□□ -1.46
LIMS1-214ENST00000542845 ADORA1P30542 326 aa5.9□□□□□ -1.46
LIMS1-214ENST00000542845 ACLYP53396 1101 aa5.9□□□□□ -1.46
LIMS1-214ENST00000542845 CCL23P55773 120 aa5.9□□□□□ -1.46
LIMS1-214ENST00000542845 RHBDL3P58872 404 aa5.9□□□□□ -1.46
LIMS1-214ENST00000542845 PTGDRQ13258 359 aa5.9□□□□□ -1.46
LIMS1-214ENST00000542845 KCNA10Q16322 511 aa5.9□□□□□ -1.46
LIMS1-214ENST00000542845 CCDC27Q2M243 656 aa5.9□□□□□ -1.46
LIMS1-214ENST00000542845 RASIP1Q5U651 963 aa5.9□□□□□ -1.46
LIMS1-214ENST00000542845 CATSPERGQ6ZRH7 1159 aa5.9□□□□□ -1.46
LIMS1-214ENST00000542845 MAPKAPK5Q8IW41 473 aa5.9□□□□□ -1.46
LIMS1-214ENST00000542845 GJD3Q8N144 294 aa5.9□□□□□ -1.46
LIMS1-214ENST00000542845 ANKRD44Q8N8A2 993 aa5.9□□□□□ -1.46
LIMS1-214ENST00000542845 SH3RF3Q8TEJ3 882 aaPredicted RBP5.9□□□□□ -1.46
LIMS1-214ENST00000542845 ARNTL2Q8WYA1 636 aa5.9□□□□□ -1.46
LIMS1-214ENST00000542845 CDCA7LQ96GN5 454 aa5.9□□□□□ -1.46
LIMS1-214ENST00000542845 NOL10Q9BSC4 688 aaKnown RBP5.9□□□□□ -1.46
LIMS1-214ENST00000542845 RPAP3Q9H6T3 665 aaPredicted RBP5.9□□□□□ -1.46
LIMS1-214ENST00000542845 IL23AQ9NPF7 189 aa5.9□□□□□ -1.46
LIMS1-214ENST00000542845 RAI14Q9P0K7 980 aa5.9□□□□□ -1.46
LIMS1-214ENST00000542845 CEP126Q9P2H0 1117 aa5.9□□□□□ -1.46
LIMS1-214ENST00000542845 PI4KBQ9UBF8 816 aa5.9□□□□□ -1.46
LIMS1-214ENST00000542845 SAP30BPQ9UHR5 308 aaKnown RBP5.9□□□□□ -1.46
LIMS1-214ENST00000542845 PALD1Q9ULE6 856 aa5.9□□□□□ -1.46
LIMS1-214ENST00000542845 ZBTB21Q9ULJ3 1066 aa5.9□□□□□ -1.46
LIMS1-214ENST00000542845 SLC4A7Q9Y6M7 1214 aa5.9□□□□□ -1.46
LIMS1-214ENST00000542845 KIF16BQ96L93 1317 aa5.9□□□□□ -1.47
LIMS1-214ENST00000542845 SALL1Q9NSC2 1324 aa5.9□□□□□ -1.47
LIMS1-214ENST00000542845 RFX7Q2KHR2 1363 aa5.9□□□□□ -1.47
LIMS1-214ENST00000542845 MUC6Q6W4X9 2439 aa5.89□□□□□ -1.47
LIMS1-214ENST00000542845 TLR3O15455 904 aaKnown RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms