RNA–Protein interactions for RNA: ENST00000542416.1

UBC-211, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 517 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-211ENST00000542416 SIPA1L1O43166 1804 aa10.79□□□□□ -0.68
UBC-211ENST00000542416 ROBO3Q96MS0 1386 aa10.79□□□□□ -0.68
UBC-211ENST00000542416 A0A1W2PQ45 241 aaPredicted RBP10.79□□□□□ -0.68
UBC-211ENST00000542416 A0A1W2PQY0 241 aa10.79□□□□□ -0.68
UBC-211ENST00000542416 CCER2I3L3R5 266 aa10.79□□□□□ -0.68
UBC-211ENST00000542416 PQBP1O60828 265 aaKnown RBP10.79□□□□□ -0.68
UBC-211ENST00000542416 STAT3P40763 770 aa10.79□□□□□ -0.68
UBC-211ENST00000542416 TMEM132BQ14DG7 1078 aa10.79□□□□□ -0.68
UBC-211ENST00000542416 SPICE1Q8N0Z3 855 aa10.79□□□□□ -0.68
UBC-211ENST00000542416 CLASRPQ8N2M8 674 aaKnown RBP10.79□□□□□ -0.68
UBC-211ENST00000542416 GOPCQ9HD26 462 aa10.79□□□□□ -0.68
UBC-211ENST00000542416 STARD7Q9NQZ5 370 aa10.79□□□□□ -0.68
UBC-211ENST00000542416 ADAMTS5Q9UNA0 930 aa10.79□□□□□ -0.68
UBC-211ENST00000542416 TNNQ9UQP3 1299 aa10.79□□□□□ -0.68
UBC-211ENST00000542416 MAST2Q6P0Q8 1798 aa10.79□□□□□ -0.68
UBC-211ENST00000542416 PGK1P00558 417 aa10.78□□□□□ -0.68
UBC-211ENST00000542416 DNAJB2P25686 324 aa10.78□□□□□ -0.68
UBC-211ENST00000542416 ZNF792Q3KQV3 632 aa10.78□□□□□ -0.68
UBC-211ENST00000542416 SAMD1Q6SPF0 538 aaPredicted RBP10.78□□□□□ -0.68
UBC-211ENST00000542416 SLC44A5Q8NCS7 719 aa10.78□□□□□ -0.68
UBC-211ENST00000542416 SDR42E1Q8WUS8 393 aa10.78□□□□□ -0.68
UBC-211ENST00000542416 TIFAQ96CG3 184 aa10.78□□□□□ -0.68
UBC-211ENST00000542416 GAS2L1Q99501 681 aaPredicted RBP10.78□□□□□ -0.68
UBC-211ENST00000542416 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.78□□□□□ -0.68
UBC-211ENST00000542416 C1orf115Q9H7X2 142 aa10.78□□□□□ -0.68
UBC-211ENST00000542416 SPC25Q9HBM1 224 aa10.78□□□□□ -0.68
UBC-211ENST00000542416 FAM184BQ9ULE4 1060 aa10.78□□□□□ -0.68
UBC-211ENST00000542416 ELP1O95163 1332 aa10.78□□□□□ -0.68
UBC-211ENST00000542416 ZNF532Q9HCE3 1301 aa10.78□□□□□ -0.68
UBC-211ENST00000542416 VWA5AO00534 786 aa10.77□□□□□ -0.69
UBC-211ENST00000542416 TIMP1P01033 207 aa10.77□□□□□ -0.69
UBC-211ENST00000542416 PGK2P07205 417 aa10.77□□□□□ -0.69
UBC-211ENST00000542416 IFIT2P09913 472 aaKnown RBP10.77□□□□□ -0.69
UBC-211ENST00000542416 ZNF865P0CJ78 1059 aaPredicted RBP10.77□□□□□ -0.69
UBC-211ENST00000542416 AKR1B1P15121 316 aa10.77□□□□□ -0.69
UBC-211ENST00000542416 ITGB8P26012 769 aa10.77□□□□□ -0.69
UBC-211ENST00000542416 ACLYP53396 1101 aa10.77□□□□□ -0.69
UBC-211ENST00000542416 FAAP100Q0VG06 881 aa10.77□□□□□ -0.69
UBC-211ENST00000542416 PPIGQ13427 754 aaKnown RBP eCLIP10.77□□□□□ -0.69
UBC-211ENST00000542416 GRIN2CQ14957 1233 aa10.77□□□□□ -0.69
UBC-211ENST00000542416 KIAA1755Q5JYT7 1200 aa10.77□□□□□ -0.69
UBC-211ENST00000542416 CEP85Q6P2H3 762 aa10.77□□□□□ -0.69
UBC-211ENST00000542416 SIAH1Q8IUQ4 282 aa10.77□□□□□ -0.69
UBC-211ENST00000542416 PCSK9Q8NBP7 692 aaKnown RBP10.77□□□□□ -0.69
UBC-211ENST00000542416 RHPN1Q8TCX5 695 aa10.77□□□□□ -0.69
UBC-211ENST00000542416 ATXN2LQ8WWM7 1075 aaKnown RBP10.77□□□□□ -0.69
UBC-211ENST00000542416 KIF1BPQ96EK5 621 aa10.77□□□□□ -0.69
UBC-211ENST00000542416 DDX11Q96FC9 970 aa10.77□□□□□ -0.69
UBC-211ENST00000542416 GLT1D1Q96MS3 346 aa10.77□□□□□ -0.69
UBC-211ENST00000542416 ZNF576Q9H609 170 aa10.77□□□□□ -0.69
UBC-211ENST00000542416 PPP1R9AQ9ULJ8 1098 aa10.77□□□□□ -0.69
UBC-211ENST00000542416 SYNGAP1Q96PV0 1343 aa10.77□□□□□ -0.69
UBC-211ENST00000542416 ZNF236Q9UL36 1845 aa10.77□□□□□ -0.69
UBC-211ENST00000542416 TCRBV5S4A2TA0A5A2 114 aa10.76□□□□□ -0.69
UBC-211ENST00000542416 TNFRSF10AO00220 468 aa10.76□□□□□ -0.69
UBC-211ENST00000542416 GOLIM4O00461 696 aa10.76□□□□□ -0.69
UBC-211ENST00000542416 ADAMTS4O75173 837 aa10.76□□□□□ -0.69
UBC-211ENST00000542416 DUSP11O75319 330 aaKnown RBP10.76□□□□□ -0.69
UBC-211ENST00000542416 EEF2P13639 858 aaKnown RBP10.76□□□□□ -0.69
UBC-211ENST00000542416 CDK8P49336 464 aa10.76□□□□□ -0.69
UBC-211ENST00000542416 EPHB4P54760 987 aa10.76□□□□□ -0.69
UBC-211ENST00000542416 AKNAD1Q5T1N1 836 aa10.76□□□□□ -0.69
UBC-211ENST00000542416 C12orf60Q5U649 245 aa10.76□□□□□ -0.69
UBC-211ENST00000542416 MFSD5Q6N075 450 aa10.76□□□□□ -0.69
UBC-211ENST00000542416 MAMDC4Q6UXC1 1216 aa10.76□□□□□ -0.69
UBC-211ENST00000542416 C16orf86Q6ZW13 317 aa10.76□□□□□ -0.69
UBC-211ENST00000542416 ZNF467Q7Z7K2 595 aaPredicted RBP10.76□□□□□ -0.69
UBC-211ENST00000542416 LCORLQ8N3X6 602 aa10.76□□□□□ -0.69
UBC-211ENST00000542416 TMEM199Q8N511 208 aa10.76□□□□□ -0.69
UBC-211ENST00000542416 DYNLL2Q96FJ2 89 aa10.76□□□□□ -0.69
UBC-211ENST00000542416 DNAJC2Q99543 621 aaKnown RBP10.76□□□□□ -0.69
UBC-211ENST00000542416 TEX13BQ9BXU2 312 aa10.76□□□□□ -0.69
UBC-211ENST00000542416 MTIF3Q9H2K0 278 aaKnown RBP10.76□□□□□ -0.69
UBC-211ENST00000542416 ZNF214Q9UL59 606 aaPredicted RBP10.76□□□□□ -0.69
UBC-211ENST00000542416 EXOC6BQ9Y2D4 811 aa10.76□□□□□ -0.69
UBC-211ENST00000542416 CTDP1Q9Y5B0 961 aaPredicted RBP10.76□□□□□ -0.69
UBC-211ENST00000542416 TLR3O15455 904 aaKnown RBP10.75□□□□□ -0.69
UBC-211ENST00000542416 HMMRO75330 724 aa10.75□□□□□ -0.69
UBC-211ENST00000542416 CYP2D6P10635 497 aa10.75□□□□□ -0.69
UBC-211ENST00000542416 TAL1P17542 331 aaPredicted RBP10.75□□□□□ -0.69
UBC-211ENST00000542416 CST5P28325 142 aaPredicted RBP10.75□□□□□ -0.69
UBC-211ENST00000542416 KCNA10Q16322 511 aa10.75□□□□□ -0.69
UBC-211ENST00000542416 ZSCAN25Q6NSZ9 544 aa10.75□□□□□ -0.69
UBC-211ENST00000542416 PSRC1Q6PGN9 363 aaPredicted RBP10.75□□□□□ -0.69
UBC-211ENST00000542416 CCDC129Q6ZRS4 1044 aa10.75□□□□□ -0.69
UBC-211ENST00000542416 KLHDC9Q8NEP7 349 aa10.75□□□□□ -0.69
UBC-211ENST00000542416 VTI1AQ96AJ9 217 aa10.75□□□□□ -0.69
UBC-211ENST00000542416 SLF1Q9BQI6 1058 aa10.75□□□□□ -0.69
UBC-211ENST00000542416 ARMT1Q9H993 441 aa10.75□□□□□ -0.69
UBC-211ENST00000542416 IL1RAPL2Q9NP60 686 aa10.75□□□□□ -0.69
UBC-211ENST00000542416 TBX21Q9UL17 535 aa10.75□□□□□ -0.69
UBC-211ENST00000542416 A0A0U1RQG5 324 aaPredicted RBP10.74□□□□□ -0.69
UBC-211ENST00000542416 USP17L12C9JPN9 530 aa10.74□□□□□ -0.69
UBC-211ENST00000542416 USP17L21D6R901 530 aa10.74□□□□□ -0.69
UBC-211ENST00000542416 ATP2A1O14983 1001 aa10.74□□□□□ -0.69
UBC-211ENST00000542416 RAD21O60216 631 aa10.74□□□□□ -0.69
UBC-211ENST00000542416 ZBED4O75132 1171 aa10.74□□□□□ -0.69
UBC-211ENST00000542416 RAB11FIP3O75154 756 aa10.74□□□□□ -0.69
UBC-211ENST00000542416 MBD4O95243 580 aa10.74□□□□□ -0.69
UBC-211ENST00000542416 MS4A1P11836 297 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms