RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 GPR162Q16538 588 aa10.75□□□□□ -0.69
LDHA-220ENST00000542179 CERKLQ49MI3 558 aaPredicted RBP10.75□□□□□ -0.69
LDHA-220ENST00000542179 RBM26Q5T8P6 1007 aaKnown RBP10.75□□□□□ -0.69
LDHA-220ENST00000542179 RAB11FIP4Q86YS3 637 aa10.75□□□□□ -0.69
LDHA-220ENST00000542179 PNMA1Q8ND90 353 aa10.75□□□□□ -0.69
LDHA-220ENST00000542179 NUP133Q8WUM0 1156 aa10.75□□□□□ -0.69
LDHA-220ENST00000542179 DDX11Q96FC9 970 aa10.75□□□□□ -0.69
LDHA-220ENST00000542179 CEP95Q96GE4 821 aa10.75□□□□□ -0.69
LDHA-220ENST00000542179 TRIM34Q9BYJ4 488 aa10.75□□□□□ -0.69
LDHA-220ENST00000542179 STX8Q9UNK0 236 aa10.75□□□□□ -0.69
LDHA-220ENST00000542179 VPS9D1Q9Y2B5 631 aa10.75□□□□□ -0.69
LDHA-220ENST00000542179 TTLL1O95922 423 aa10.74□□□□□ -0.69
LDHA-220ENST00000542179 KIF5BP33176 963 aa10.74□□□□□ -0.69
LDHA-220ENST00000542179 GNAQP50148 359 aa10.74□□□□□ -0.69
LDHA-220ENST00000542179 FUT2Q10981 343 aa10.74□□□□□ -0.69
LDHA-220ENST00000542179 RASA3Q14644 834 aa10.74□□□□□ -0.69
LDHA-220ENST00000542179 GRM4Q14833 912 aa10.74□□□□□ -0.69
LDHA-220ENST00000542179 NFKBIBQ15653 356 aa10.74□□□□□ -0.69
LDHA-220ENST00000542179 TBC1D10BQ4KMP7 808 aaPredicted RBP10.74□□□□□ -0.69
LDHA-220ENST00000542179 TMEM179Q6ZVK1 233 aa10.74□□□□□ -0.69
LDHA-220ENST00000542179 NBPF11Q86T75 865 aa10.74□□□□□ -0.69
LDHA-220ENST00000542179 APOBEC3FQ8IUX4 373 aaKnown RBP10.74□□□□□ -0.69
LDHA-220ENST00000542179 CCDC144CPQ8IYA2 1237 aa10.74□□□□□ -0.69
LDHA-220ENST00000542179 CTCFLQ8NI51 663 aaPredicted RBP10.74□□□□□ -0.69
LDHA-220ENST00000542179 WASF1Q92558 559 aa10.74□□□□□ -0.69
LDHA-220ENST00000542179 MKL1Q969V6 931 aa10.74□□□□□ -0.69
LDHA-220ENST00000542179 TEPSINQ96N21 525 aa10.74□□□□□ -0.69
LDHA-220ENST00000542179 GBP4Q96PP9 640 aa10.74□□□□□ -0.69
LDHA-220ENST00000542179 ADAM33Q9BZ11 813 aa10.74□□□□□ -0.69
LDHA-220ENST00000542179 KANSL2Q9H9L4 492 aa10.74□□□□□ -0.69
LDHA-220ENST00000542179 ORC3Q9UBD5 711 aaPredicted RBP10.74□□□□□ -0.69
LDHA-220ENST00000542179 HACL1Q9UJ83 578 aa10.74□□□□□ -0.69
LDHA-220ENST00000542179 PCDHGA10Q9Y5H3 936 aa10.74□□□□□ -0.69
LDHA-220ENST00000542179 PALM3A6NDB9 673 aaPredicted RBP10.73□□□□□ -0.69
LDHA-220ENST00000542179 PRPF3O43395 683 aaKnown RBP10.73□□□□□ -0.69
LDHA-220ENST00000542179 DDNO94850 711 aaPredicted RBP10.73□□□□□ -0.69
LDHA-220ENST00000542179 F13A1P00488 732 aa10.73□□□□□ -0.69
LDHA-220ENST00000542179 SMARCA1P28370 1054 aa10.73□□□□□ -0.69
LDHA-220ENST00000542179 LMOD1P29536 600 aaPredicted RBP10.73□□□□□ -0.69
LDHA-220ENST00000542179 EPS15P42566 896 aa10.73□□□□□ -0.69
LDHA-220ENST00000542179 SSRP1Q08945 709 aaKnown RBP10.73□□□□□ -0.69
LDHA-220ENST00000542179 ABCB5Q2M3G0 1257 aa10.73□□□□□ -0.69
LDHA-220ENST00000542179 TYW1BQ6NUM6 668 aa10.73□□□□□ -0.69
LDHA-220ENST00000542179 TMTC3Q6ZXV5 915 aa10.73□□□□□ -0.69
LDHA-220ENST00000542179 TRIM22Q8IYM9 498 aa10.73□□□□□ -0.69
LDHA-220ENST00000542179 LZTS2Q9BRK4 669 aa10.73□□□□□ -0.69
LDHA-220ENST00000542179 RNF26Q9BY78 433 aaPredicted RBP10.73□□□□□ -0.69
LDHA-220ENST00000542179 TMEM39BQ9GZU3 492 aa10.73□□□□□ -0.69
LDHA-220ENST00000542179 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.73□□□□□ -0.698e-8■□□□□ 11.2
LDHA-220ENST00000542179 ADARB2Q9NS39 739 aaKnown RBP10.73□□□□□ -0.69
LDHA-220ENST00000542179 NYAP2Q9P242 653 aa10.73□□□□□ -0.69
LDHA-220ENST00000542179 HCSTQ9UBK5 93 aa10.73□□□□□ -0.69
LDHA-220ENST00000542179 SYNPO2Q9UMS6 1093 aa10.73□□□□□ -0.69
LDHA-220ENST00000542179 ATP6V1DQ9Y5K8 247 aa10.73□□□□□ -0.69
LDHA-220ENST00000542179 PPP2R3BQ9Y5P8 575 aa10.73□□□□□ -0.69
LDHA-220ENST00000542179 PITPNM2Q9BZ72 1349 aa10.73□□□□□ -0.69
LDHA-220ENST00000542179 FAM196BA6NMK8 535 aa10.72□□□□□ -0.69
LDHA-220ENST00000542179 DTNBO60941 627 aa10.72□□□□□ -0.69
LDHA-220ENST00000542179 DEXIO95424 95 aa10.72□□□□□ -0.69
LDHA-220ENST00000542179 BAG4O95429 457 aaKnown RBP10.72□□□□□ -0.69
LDHA-220ENST00000542179 SLURP2P0DP57 97 aa10.72□□□□□ -0.69
LDHA-220ENST00000542179 SNHG28P0DPA3 235 aa10.72□□□□□ -0.69
LDHA-220ENST00000542179 GUCY1A2P33402 732 aa10.72□□□□□ -0.69
LDHA-220ENST00000542179 HIRAP54198 1017 aaPredicted RBP10.72□□□□□ -0.69
LDHA-220ENST00000542179 FBXO18Q8NFZ0 1043 aa10.72□□□□□ -0.69
LDHA-220ENST00000542179 TRPM4Q8TD43 1214 aa10.72□□□□□ -0.69
LDHA-220ENST00000542179 PHKBQ93100 1093 aa10.72□□□□□ -0.69
LDHA-220ENST00000542179 HOOK2Q96ED9 719 aa10.72□□□□□ -0.69
LDHA-220ENST00000542179 EPAS1Q99814 870 aa10.72□□□□□ -0.69
LDHA-220ENST00000542179 DEFB129Q9H1M3 183 aa10.72□□□□□ -0.69
LDHA-220ENST00000542179 ZSCAN16Q9H4T2 348 aaPredicted RBP10.72□□□□□ -0.69
LDHA-220ENST00000542179 CABP5Q9NP86 173 aa10.72□□□□□ -0.69
LDHA-220ENST00000542179 GINM1Q9NU53 330 aa10.72□□□□□ -0.69
LDHA-220ENST00000542179 RBM27Q9P2N5 1060 aaKnown RBP10.72□□□□□ -0.69
LDHA-220ENST00000542179 MAD2L2Q9UI95 211 aa10.72□□□□□ -0.69
LDHA-220ENST00000542179 VPS37CA5D8V6 355 aaPredicted RBP10.71□□□□□ -0.69
LDHA-220ENST00000542179 H3BQV1 296 aa10.71□□□□□ -0.69
LDHA-220ENST00000542179 MPHOSPH10O00566 681 aaKnown RBP10.71□□□□□ -0.69
LDHA-220ENST00000542179 ASTN2O75129 1339 aaPredicted RBP10.71□□□□□ -0.69
LDHA-220ENST00000542179 MCM4P33991 863 aa10.71□□□□□ -0.69
LDHA-220ENST00000542179 RRP1BQ14684 758 aaKnown RBP10.71□□□□□ -0.69
LDHA-220ENST00000542179 E2F4Q16254 413 aa10.71□□□□□ -0.69
LDHA-220ENST00000542179 ANGEL2Q5VTE6 544 aaKnown RBP10.71□□□□□ -0.69
LDHA-220ENST00000542179 CDC37L1Q7L3B6 337 aa10.71□□□□□ -0.69
LDHA-220ENST00000542179 SIAH1Q8IUQ4 282 aa10.71□□□□□ -0.69
LDHA-220ENST00000542179 SRBD1Q8N5C6 995 aaKnown RBP10.71□□□□□ -0.69
LDHA-220ENST00000542179 C8orf76Q96K31 380 aa10.71□□□□□ -0.69
LDHA-220ENST00000542179 ALG1Q9BT22 464 aa10.71□□□□□ -0.69
LDHA-220ENST00000542179 SLC26A6Q9BXS9 759 aa10.71□□□□□ -0.69
LDHA-220ENST00000542179 CLIP2Q9UDT6 1046 aa10.71□□□□□ -0.69
LDHA-220ENST00000542179 CNTNAP5Q8WYK1 1306 aa10.7□□□□□ -0.7
LDHA-220ENST00000542179 GLTPD2A6NH11 291 aa10.7□□□□□ -0.7
LDHA-220ENST00000542179 DDX11L8A8MPP1 907 aa10.7□□□□□ -0.7
LDHA-220ENST00000542179 PHF20L1A8MW92 1017 aa10.7□□□□□ -0.7
LDHA-220ENST00000542179 PLEKHA8P1O95397 391 aa10.7□□□□□ -0.7
LDHA-220ENST00000542179 PARP1P09874 1014 aaKnown RBP10.7□□□□□ -0.7
LDHA-220ENST00000542179 PDHBP11177 359 aa10.7□□□□□ -0.7
LDHA-220ENST00000542179 EEF2P13639 858 aaKnown RBP10.7□□□□□ -0.7
LDHA-220ENST00000542179 PTMSP20962 102 aa10.7□□□□□ -0.7
LDHA-220ENST00000542179 CAP2P40123 477 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms