RNA–Protein interactions for RNA: ENST00000542133.5

NPIPB4-215, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-215ENST00000542133 SLC4A10Q6U841 1118 aa9.47□□□□□ -0.89
NPIPB4-215ENST00000542133 CCDC129Q6ZRS4 1044 aa9.47□□□□□ -0.89
NPIPB4-215ENST00000542133 SLF2Q8IX21 1173 aa9.47□□□□□ -0.89
NPIPB4-215ENST00000542133 HERC5Q9UII4 1024 aaKnown RBP9.47□□□□□ -0.89
NPIPB4-215ENST00000542133 PHF24Q9UPV7 400 aa9.47□□□□□ -0.89
NPIPB4-215ENST00000542133 RABGAP1Q9Y3P9 1069 aa9.47□□□□□ -0.89
NPIPB4-215ENST00000542133 IL16Q14005 1332 aa9.47□□□□□ -0.89
NPIPB4-215ENST00000542133 GPR37L1O60883 481 aa9.46□□□□□ -0.9
NPIPB4-215ENST00000542133 RFX5P48382 616 aaPredicted RBP9.46□□□□□ -0.9
NPIPB4-215ENST00000542133 ATP2B3Q16720 1220 aa9.46□□□□□ -0.9
NPIPB4-215ENST00000542133 AAK1Q2M2I8 961 aa9.46□□□□□ -0.9
NPIPB4-215ENST00000542133 OLFML2BQ68BL8 750 aa9.46□□□□□ -0.9
NPIPB4-215ENST00000542133 ZNF384Q8TF68 577 aa9.46□□□□□ -0.9
NPIPB4-215ENST00000542133 DNAJC18Q9H819 358 aa9.46□□□□□ -0.9
NPIPB4-215ENST00000542133 EMILIN3Q9NT22 766 aa9.46□□□□□ -0.9
NPIPB4-215ENST00000542133 ABCF2Q9UG63 623 aa9.46□□□□□ -0.9
NPIPB4-215ENST00000542133 IVNS1ABPQ9Y6Y0 642 aa9.46□□□□□ -0.9
NPIPB4-215ENST00000542133 PDS5AQ29RF7 1337 aaKnown RBP9.46□□□□□ -0.9
NPIPB4-215ENST00000542133 TRANK1O15050 2925 aa9.46□□□□□ -0.9
NPIPB4-215ENST00000542133 A0A0G2JMZ2 1700 aa9.45□□□□□ -0.9
NPIPB4-215ENST00000542133 FAM86C2PA6NEL3 165 aa9.45□□□□□ -0.9
NPIPB4-215ENST00000542133 MRE11P49959 708 aa9.45□□□□□ -0.9
NPIPB4-215ENST00000542133 FAAP100Q0VG06 881 aa9.45□□□□□ -0.9
NPIPB4-215ENST00000542133 RASGRF1Q13972 1273 aa9.45□□□□□ -0.9
NPIPB4-215ENST00000542133 ATG9AQ7Z3C6 839 aa9.45□□□□□ -0.9
NPIPB4-215ENST00000542133 KHSRPQ92945 711 aaKnown RBP eCLIP9.45□□□□□ -0.9
NPIPB4-215ENST00000542133 C12orf42Q96LP6 360 aa9.45□□□□□ -0.9
NPIPB4-215ENST00000542133 TMEM39AQ9NV64 488 aa9.45□□□□□ -0.9
NPIPB4-215ENST00000542133 ZBTB21Q9ULJ3 1066 aa9.45□□□□□ -0.9
NPIPB4-215ENST00000542133 ROBO3Q96MS0 1386 aa9.45□□□□□ -0.9
NPIPB4-215ENST00000542133 A0A1W2PQ45 241 aaPredicted RBP9.44□□□□□ -0.9
NPIPB4-215ENST00000542133 A0A1W2PQY0 241 aa9.44□□□□□ -0.9
NPIPB4-215ENST00000542133 ERC2O15083 957 aa9.44□□□□□ -0.9
NPIPB4-215ENST00000542133 GDF11O95390 407 aa9.44□□□□□ -0.9
NPIPB4-215ENST00000542133 MAP4K4O95819 1239 aaPredicted RBP9.44□□□□□ -0.9
NPIPB4-215ENST00000542133 ADORA2AP29274 412 aa9.44□□□□□ -0.9
NPIPB4-215ENST00000542133 MECOMQ03112 1051 aa9.44□□□□□ -0.9
NPIPB4-215ENST00000542133 RAB30Q15771 203 aa9.44□□□□□ -0.9
NPIPB4-215ENST00000542133 TMEM240Q5SV17 173 aa9.44□□□□□ -0.9
NPIPB4-215ENST00000542133 CCDC102BQ68D86 513 aa9.44□□□□□ -0.9
NPIPB4-215ENST00000542133 USP17L2Q6R6M4 530 aa9.44□□□□□ -0.9
NPIPB4-215ENST00000542133 LBX2Q6XYB7 198 aa9.44□□□□□ -0.9
NPIPB4-215ENST00000542133 NOL8Q76FK4 1167 aaKnown RBP9.44□□□□□ -0.9
NPIPB4-215ENST00000542133 C16orf59Q7L2K0 433 aa9.44□□□□□ -0.9
NPIPB4-215ENST00000542133 ANKRD33Q7Z3H0 272 aa9.44□□□□□ -0.9
NPIPB4-215ENST00000542133 TMTC2Q8N394 836 aa9.44□□□□□ -0.9
NPIPB4-215ENST00000542133 MICALL1Q8N3F8 863 aa9.44□□□□□ -0.9
NPIPB4-215ENST00000542133 SLC44A5Q8NCS7 719 aa9.44□□□□□ -0.9
NPIPB4-215ENST00000542133 HS3ST6Q96QI5 342 aa9.44□□□□□ -0.9
NPIPB4-215ENST00000542133 NKX2-4Q9H2Z4 354 aa9.44□□□□□ -0.9
NPIPB4-215ENST00000542133 BTBD7Q9P203 1132 aa9.44□□□□□ -0.9
NPIPB4-215ENST00000542133 TBX21Q9UL17 535 aa9.44□□□□□ -0.9
NPIPB4-215ENST00000542133 FOCADQ5VW36 1801 aa9.44□□□□□ -0.9
NPIPB4-215ENST00000542133 CDK5RAP2Q96SN8 1893 aa9.43□□□□□ -0.9
NPIPB4-215ENST00000542133 USP17L15C9J2P7 530 aa9.43□□□□□ -0.9
NPIPB4-215ENST00000542133 USP17L13C9JLJ4 530 aa9.43□□□□□ -0.9
NPIPB4-215ENST00000542133 USP17L11C9JVI0 530 aa9.43□□□□□ -0.9
NPIPB4-215ENST00000542133 USP17L18D6R9N7 530 aa9.43□□□□□ -0.9
NPIPB4-215ENST00000542133 USP17L22D6RA61 530 aa9.43□□□□□ -0.9
NPIPB4-215ENST00000542133 USP17L17D6RBQ6 530 aa9.43□□□□□ -0.9
NPIPB4-215ENST00000542133 USP17L19D6RCP7 530 aa9.43□□□□□ -0.9
NPIPB4-215ENST00000542133 USP17L20D6RJB6 530 aa9.43□□□□□ -0.9
NPIPB4-215ENST00000542133 CLGNO14967 610 aa9.43□□□□□ -0.9
NPIPB4-215ENST00000542133 TIMP1P01033 207 aa9.43□□□□□ -0.9
NPIPB4-215ENST00000542133 HOXB3P14651 431 aaPredicted RBP9.43□□□□□ -0.9
NPIPB4-215ENST00000542133 ADORA1P30542 326 aa9.43□□□□□ -0.9
NPIPB4-215ENST00000542133 FAM193AP78312 1265 aa9.43□□□□□ -0.9
NPIPB4-215ENST00000542133 EXOSC9Q06265 439 aaKnown RBP9.43□□□□□ -0.9
NPIPB4-215ENST00000542133 USP17L24Q0WX57 530 aa9.43□□□□□ -0.9
NPIPB4-215ENST00000542133 PPIGQ13427 754 aaKnown RBP eCLIP9.43□□□□□ -0.94e-9■□□□□ 10.8
NPIPB4-215ENST00000542133 OS9Q13438 667 aaPredicted RBP9.43□□□□□ -0.9
NPIPB4-215ENST00000542133 SPTY2D1Q68D10 685 aaPredicted RBP9.43□□□□□ -0.9
NPIPB4-215ENST00000542133 MFSD5Q6N075 450 aa9.43□□□□□ -0.9
NPIPB4-215ENST00000542133 PSRC1Q6PGN9 363 aaPredicted RBP9.43□□□□□ -0.9
NPIPB4-215ENST00000542133 CCDC174Q6PII3 467 aa9.43□□□□□ -0.9
NPIPB4-215ENST00000542133 DPP9Q86TI2 863 aa9.43□□□□□ -0.9
NPIPB4-215ENST00000542133 TOX2Q96NM4 488 aa9.43□□□□□ -0.9
NPIPB4-215ENST00000542133 XPNPEP3Q9NQH7 507 aa9.43□□□□□ -0.9
NPIPB4-215ENST00000542133 GINM1Q9NU53 330 aa9.43□□□□□ -0.9
NPIPB4-215ENST00000542133 PI4KBQ9UBF8 816 aa9.43□□□□□ -0.9
NPIPB4-215ENST00000542133 MSRAQ9UJ68 235 aa9.43□□□□□ -0.9
NPIPB4-215ENST00000542133 YBX2Q9Y2T7 364 aaKnown RBP9.43□□□□□ -0.9
NPIPB4-215ENST00000542133 SPDYE16A6NNV3 312 aaPredicted RBP9.42□□□□□ -0.9
NPIPB4-215ENST00000542133 VCAM1P19320 739 aa9.42□□□□□ -0.9
NPIPB4-215ENST00000542133 ZYXQ15942 572 aaKnown RBP9.42□□□□□ -0.9
NPIPB4-215ENST00000542133 PRAMEF19Q5SWL8 479 aa9.42□□□□□ -0.9
NPIPB4-215ENST00000542133 CATSPERGQ6ZRH7 1159 aa9.42□□□□□ -0.9
NPIPB4-215ENST00000542133 METTL16Q86W50 562 aaKnown RBP9.42□□□□□ -0.9
NPIPB4-215ENST00000542133 TEX11Q8IYF3 940 aa9.42□□□□□ -0.9
NPIPB4-215ENST00000542133 HERVK_113Q902F9 699 aa9.42□□□□□ -0.9
NPIPB4-215ENST00000542133 SLC28A3Q9HAS3 691 aa9.42□□□□□ -0.9
NPIPB4-215ENST00000542133 KCNG1Q9UIX4 513 aa9.42□□□□□ -0.9
NPIPB4-215ENST00000542133 PRRC2BQ5JSZ5 2229 aaKnown RBP9.41□□□□□ -0.9
NPIPB4-215ENST00000542133 DCDC2CA8MYV0 355 aa9.41□□□□□ -0.9
NPIPB4-215ENST00000542133 TLL1O43897 1013 aa9.41□□□□□ -0.9
NPIPB4-215ENST00000542133 COBLO75128 1261 aa9.41□□□□□ -0.9
NPIPB4-215ENST00000542133 CIAO1O76071 339 aa9.41□□□□□ -0.9
NPIPB4-215ENST00000542133 PGK1P00558 417 aa9.41□□□□□ -0.9
NPIPB4-215ENST00000542133 ACRP10323 421 aa9.41□□□□□ -0.9
NPIPB4-215ENST00000542133 RARBP10826 455 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms