RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 SOX5P35711 763 aa6.97□□□□□ -1.29
DMD-228ENST00000541735 GBP7Q8N8V2 638 aaPredicted RBP6.97□□□□□ -1.29
DMD-228ENST00000541735 FGD4Q96M96 766 aa6.97□□□□□ -1.29
DMD-228ENST00000541735 NCOA5Q9HCD5 579 aaKnown RBP6.97□□□□□ -1.29
DMD-228ENST00000541735 ZNF277Q9NRM2 450 aaPredicted RBP6.97□□□□□ -1.29
DMD-228ENST00000541735 CCDC85CA6NKD9 419 aa6.96□□□□□ -1.29
DMD-228ENST00000541735 SYT1P21579 422 aa6.96□□□□□ -1.29
DMD-228ENST00000541735 LACTBP83111 547 aaPredicted RBP6.96□□□□□ -1.29
DMD-228ENST00000541735 SCARA5Q6ZMJ2 495 aa6.96□□□□□ -1.29
DMD-228ENST00000541735 CEP120Q8N960 986 aa6.96□□□□□ -1.29
DMD-228ENST00000541735 AFG1LQ8WV93 481 aa6.96□□□□□ -1.29
DMD-228ENST00000541735 ARHGEF2Q92974 986 aaKnown RBP6.96□□□□□ -1.29
DMD-228ENST00000541735 COG4Q9H9E3 785 aa6.96□□□□□ -1.29
DMD-228ENST00000541735 DNAJC5BQ9UF47 199 aa6.96□□□□□ -1.29
DMD-228ENST00000541735 RSPH14Q9UHP6 348 aa6.96□□□□□ -1.29
DMD-228ENST00000541735 KCNJ14Q9UNX9 436 aa6.96□□□□□ -1.29
DMD-228ENST00000541735 CTAGE15A4D2H0 777 aa6.96□□□□□ -1.3
DMD-228ENST00000541735 RSPH10B2B2RC85 870 aa6.96□□□□□ -1.3
DMD-228ENST00000541735 HNRNPCL2B2RXH8 293 aa6.96□□□□□ -1.3
DMD-228ENST00000541735 HNRNPCL1O60812 293 aaKnown RBP6.96□□□□□ -1.3
DMD-228ENST00000541735 RSPH10BP0C881 870 aa6.96□□□□□ -1.3
DMD-228ENST00000541735 CTAGE8P0CG41 777 aa6.96□□□□□ -1.3
DMD-228ENST00000541735 ICA1Q05084 483 aa6.96□□□□□ -1.3
DMD-228ENST00000541735 DNM1Q05193 864 aaKnown RBP6.96□□□□□ -1.3
DMD-228ENST00000541735 PRR23CQ6ZRP0 262 aa6.96□□□□□ -1.3
DMD-228ENST00000541735 CTAGE6Q86UF2 777 aa6.96□□□□□ -1.3
DMD-228ENST00000541735 CTAGE4Q8IX94 777 aa6.96□□□□□ -1.3
DMD-228ENST00000541735 KLHL7Q8IXQ5 586 aa6.96□□□□□ -1.3
DMD-228ENST00000541735 MIPOL1Q8TD10 442 aa6.96□□□□□ -1.3
DMD-228ENST00000541735 CNKSR1Q969H4 720 aa6.96□□□□□ -1.3
DMD-228ENST00000541735 DDX19AQ9NUU7 478 aaKnown RBP6.96□□□□□ -1.3
DMD-228ENST00000541735 KIF21BO75037 1637 aa6.96□□□□□ -1.3
DMD-228ENST00000541735 A0A1B0GVL5 298 aa6.96□□□□□ -1.3
DMD-228ENST00000541735 MAFGO15525 162 aa6.96□□□□□ -1.3
DMD-228ENST00000541735 VCPP55072 806 aaKnown RBP6.96□□□□□ -1.3
DMD-228ENST00000541735 CCDC184Q52MB2 194 aa6.96□□□□□ -1.3
DMD-228ENST00000541735 RWDD4Q6NW29 188 aaKnown RBP6.96□□□□□ -1.3
DMD-228ENST00000541735 EHBP1Q8NDI1 1231 aa6.96□□□□□ -1.3
DMD-228ENST00000541735 CSRNP2Q9H175 543 aa6.96□□□□□ -1.3
DMD-228ENST00000541735 HMG20BQ9P0W2 317 aa6.96□□□□□ -1.3
DMD-228ENST00000541735 CTAGE9A4FU28 777 aa6.96□□□□□ -1.3
DMD-228ENST00000541735 DDHD2O94830 711 aa6.96□□□□□ -1.3
DMD-228ENST00000541735 PTPREP23469 700 aa6.96□□□□□ -1.3
DMD-228ENST00000541735 BTDP43251 543 aa6.96□□□□□ -1.3
DMD-228ENST00000541735 ABCB5Q2M3G0 1257 aa6.96□□□□□ -1.3
DMD-228ENST00000541735 FAM160B1Q5W0V3 765 aa6.96□□□□□ -1.3
DMD-228ENST00000541735 INTS8Q75QN2 995 aaKnown RBP6.96□□□□□ -1.3
DMD-228ENST00000541735 PDCD7Q8N8D1 485 aaKnown RBP6.96□□□□□ -1.3
DMD-228ENST00000541735 LRWD1Q9UFC0 647 aa6.96□□□□□ -1.3
DMD-228ENST00000541735 AFF4Q9UHB7 1163 aaKnown RBP6.96□□□□□ -1.3
DMD-228ENST00000541735 F5H423 210 aaPredicted RBP6.96□□□□□ -1.3
DMD-228ENST00000541735 CETN3O15182 167 aa6.96□□□□□ -1.3
DMD-228ENST00000541735 INPP1P49441 399 aa6.96□□□□□ -1.3
DMD-228ENST00000541735 EIF4A2Q14240 407 aaKnown RBP6.96□□□□□ -1.3
DMD-228ENST00000541735 MTERF4Q7Z6M4 381 aaKnown RBP6.96□□□□□ -1.3
DMD-228ENST00000541735 TEX2Q8IWB9 1127 aa6.96□□□□□ -1.3
DMD-228ENST00000541735 MRPL46Q9H2W6 279 aaKnown RBP6.96□□□□□ -1.3
DMD-228ENST00000541735 NKIRAS1Q9NYS0 192 aa6.96□□□□□ -1.3
DMD-228ENST00000541735 NXF1Q9UBU9 619 aaKnown RBP6.96□□□□□ -1.3
DMD-228ENST00000541735 BMP15O95972 392 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 NSUN2Q08J23 767 aaKnown RBP eCLIP6.95□□□□□ -1.3
DMD-228ENST00000541735 ARMCX5Q6P1M9 558 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 SIX5Q8N196 739 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 ANKS4BQ8N8V4 417 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 C8orf58Q8NAV2 365 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 MRPS27Q92552 414 aaKnown RBP6.95□□□□□ -1.3
DMD-228ENST00000541735 STMN2Q93045 179 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 RAB3IPQ96QF0 476 aaPredicted RBP6.95□□□□□ -1.3
DMD-228ENST00000541735 FAM114A2Q9NRY5 505 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 TROQ12816 1431 aaPredicted RBP6.95□□□□□ -1.3
DMD-228ENST00000541735 POTEB2H3BUK9 544 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 KRT15P19012 456 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 SLC16A2P36021 539 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 TECP42680 631 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 KCNJ6P48051 423 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 TTLL7Q6ZT98 887 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 SNX19Q92543 992 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 TRIM35Q9UPQ4 493 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 SERPIND1P05546 499 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 FBXW10Q5XX13 1052 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 RNF139Q8WU17 664 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 TSC1Q92574 1164 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 VPS54Q9P1Q0 977 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 SPECC1L-ADORA2AF8WAN1 911 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 TBC1D8BQ0IIM8 1120 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 DMP1Q13316 513 aaPredicted RBP6.95□□□□□ -1.3
DMD-228ENST00000541735 SMAD1Q15797 465 aaKnown RBP6.95□□□□□ -1.3
DMD-228ENST00000541735 ERCC6LQ2NKX8 1250 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 MTERF2Q49AM1 385 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 CCDC105Q8IYK2 499 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 ZCWPW1Q9H0M4 648 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 NLRC4Q9NPP4 1024 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 VPS18Q9P253 973 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 PCDHA1Q9Y5I3 950 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 ABCC5O15440 1437 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 CUX1P39880 1505 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 A6NJR5 290 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 SMIM24O75264 130 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 IGFBP4P22692 258 aa6.95□□□□□ -1.3
DMD-228ENST00000541735 HOXD10P28358 340 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms