RNA–Protein interactions for RNA: ENST00000541681.1

VEGFB-203, Transcript of vascular endothelial growth factor B, humanhuman

TSL 3

Gene VEGFB, Length 225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-203ENST00000541681 ROBO3Q96MS0 1386 aa7.59□□□□□ -1.2
VEGFB-203ENST00000541681 TNKSO95271 1327 aa7.58□□□□□ -1.2
VEGFB-203ENST00000541681 SIPA1L1O43166 1804 aa7.58□□□□□ -1.2
VEGFB-203ENST00000541681 SYCE3A1L190 88 aa7.58□□□□□ -1.2
VEGFB-203ENST00000541681 RANBP6O60518 1105 aaKnown RBP7.58□□□□□ -1.2
VEGFB-203ENST00000541681 USP5P45974 858 aa7.58□□□□□ -1.2
VEGFB-203ENST00000541681 GTF2A2P52657 109 aa7.58□□□□□ -1.2
VEGFB-203ENST00000541681 INHBEP58166 350 aa7.58□□□□□ -1.2
VEGFB-203ENST00000541681 MAP3K9P80192 1104 aa7.58□□□□□ -1.2
VEGFB-203ENST00000541681 TRIM29Q14134 588 aa7.58□□□□□ -1.2
VEGFB-203ENST00000541681 DCAF15Q66K64 600 aa7.58□□□□□ -1.2
VEGFB-203ENST00000541681 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.58□□□□□ -1.2
VEGFB-203ENST00000541681 MIGA2Q7L4E1 593 aa7.58□□□□□ -1.2
VEGFB-203ENST00000541681 MICU3Q86XE3 530 aa7.58□□□□□ -1.2
VEGFB-203ENST00000541681 TRIM22Q8IYM9 498 aa7.58□□□□□ -1.2
VEGFB-203ENST00000541681 CRACR2BQ8N4Y2 399 aaPredicted RBP7.58□□□□□ -1.2
VEGFB-203ENST00000541681 FANCBQ8NB91 859 aa7.58□□□□□ -1.2
VEGFB-203ENST00000541681 BRI3BPQ8WY22 251 aa7.58□□□□□ -1.2
VEGFB-203ENST00000541681 ANKS1AQ92625 1134 aa7.58□□□□□ -1.2
VEGFB-203ENST00000541681 ANP32BQ92688 251 aaKnown RBP7.58□□□□□ -1.2
VEGFB-203ENST00000541681 ZKSCAN4Q969J2 545 aaPredicted RBP7.58□□□□□ -1.2
VEGFB-203ENST00000541681 HOOK2Q96ED9 719 aa7.58□□□□□ -1.2
VEGFB-203ENST00000541681 PTPN18Q99952 460 aa7.58□□□□□ -1.2
VEGFB-203ENST00000541681 TSPY26PQ9H489 355 aa7.58□□□□□ -1.2
VEGFB-203ENST00000541681 ZNF287Q9HBT7 754 aa7.58□□□□□ -1.2
VEGFB-203ENST00000541681 RTN4Q9NQC3 1192 aaKnown RBP7.58□□□□□ -1.2
VEGFB-203ENST00000541681 DDX19AQ9NUU7 478 aaKnown RBP7.58□□□□□ -1.2
VEGFB-203ENST00000541681 RBM28Q9NW13 759 aaKnown RBP7.58□□□□□ -1.2
VEGFB-203ENST00000541681 RTEL1Q9NZ71 1219 aa7.58□□□□□ -1.2
VEGFB-203ENST00000541681 DAGLAQ9Y4D2 1042 aa7.58□□□□□ -1.2
VEGFB-203ENST00000541681 SNCAIPQ9Y6H5 919 aa7.58□□□□□ -1.2
VEGFB-203ENST00000541681 GAKO14976 1311 aa7.57□□□□□ -1.2
VEGFB-203ENST00000541681 CYP2D7A0A087X1C5 515 aa7.57□□□□□ -1.2
VEGFB-203ENST00000541681 UNCXA6NJT0 531 aa7.57□□□□□ -1.2
VEGFB-203ENST00000541681 WDHD1O75717 1129 aaPredicted RBP7.57□□□□□ -1.2
VEGFB-203ENST00000541681 DDAH1O94760 285 aa7.57□□□□□ -1.2
VEGFB-203ENST00000541681 DEXIO95424 95 aa7.57□□□□□ -1.2
VEGFB-203ENST00000541681 YEATS4O95619 227 aa7.57□□□□□ -1.2
VEGFB-203ENST00000541681 U2AF2P26368 475 aaKnown RBP eCLIP7.57□□□□□ -1.2
VEGFB-203ENST00000541681 NASPP49321 788 aaPredicted RBP7.57□□□□□ -1.2
VEGFB-203ENST00000541681 HDLBPQ00341 1268 aaKnown RBP7.57□□□□□ -1.2
VEGFB-203ENST00000541681 GUCY1B3Q02153 619 aa7.57□□□□□ -1.2
VEGFB-203ENST00000541681 SP3Q02447 781 aa7.57□□□□□ -1.2
VEGFB-203ENST00000541681 UVSSAQ2YD98 709 aa7.57□□□□□ -1.2
VEGFB-203ENST00000541681 NOM1Q5C9Z4 860 aaKnown RBP7.57□□□□□ -1.2
VEGFB-203ENST00000541681 IFIT1BQ5T764 474 aaKnown RBP7.57□□□□□ -1.2
VEGFB-203ENST00000541681 MYSM1Q5VVJ2 828 aa7.57□□□□□ -1.2
VEGFB-203ENST00000541681 KRT40Q6A162 431 aa7.57□□□□□ -1.2
VEGFB-203ENST00000541681 APOBEC3HQ6NTF7 200 aaKnown RBP7.57□□□□□ -1.2
VEGFB-203ENST00000541681 CATIPQ7Z7H3 387 aa7.57□□□□□ -1.2
VEGFB-203ENST00000541681 NBPF11Q86T75 865 aa7.57□□□□□ -1.2
VEGFB-203ENST00000541681 RAB11FIP4Q86YS3 637 aa7.57□□□□□ -1.2
VEGFB-203ENST00000541681 FAM43AQ8N2R8 423 aa7.57□□□□□ -1.2
VEGFB-203ENST00000541681 ENAHQ8N8S7 591 aaPredicted RBP7.57□□□□□ -1.2
VEGFB-203ENST00000541681 SH3RF3Q8TEJ3 882 aaPredicted RBP7.57□□□□□ -1.2
VEGFB-203ENST00000541681 PGBD1Q96JS3 809 aa7.57□□□□□ -1.2
VEGFB-203ENST00000541681 USP28Q96RU2 1077 aa7.57□□□□□ -1.2
VEGFB-203ENST00000541681 MAP3K14Q99558 947 aa7.57□□□□□ -1.2
VEGFB-203ENST00000541681 ZKSCAN3Q9BRR0 538 aa7.57□□□□□ -1.2
VEGFB-203ENST00000541681 MRIQ9BWK5 157 aa7.57□□□□□ -1.2
VEGFB-203ENST00000541681 CFHR5Q9BXR6 569 aa7.57□□□□□ -1.2
VEGFB-203ENST00000541681 RNF26Q9BY78 433 aaPredicted RBP7.57□□□□□ -1.2
VEGFB-203ENST00000541681 ZNF341Q9BYN7 854 aa7.57□□□□□ -1.2
VEGFB-203ENST00000541681 RBSNQ9H1K0 784 aa7.57□□□□□ -1.2
VEGFB-203ENST00000541681 EFCC1Q9HA90 598 aa7.57□□□□□ -1.2
VEGFB-203ENST00000541681 ZFYVE28Q9HCC9 887 aa7.57□□□□□ -1.2
VEGFB-203ENST00000541681 TCP11L1Q9NUJ3 509 aa7.57□□□□□ -1.2
VEGFB-203ENST00000541681 USP40Q9NVE5 1235 aa7.57□□□□□ -1.2
VEGFB-203ENST00000541681 POLR3EQ9NVU0 708 aa7.57□□□□□ -1.2
VEGFB-203ENST00000541681 MCM9Q9NXL9 1143 aa7.57□□□□□ -1.2
VEGFB-203ENST00000541681 SPDYE5A6NIY4 337 aa7.56□□□□□ -1.2
VEGFB-203ENST00000541681 PRPF3O43395 683 aaKnown RBP7.56□□□□□ -1.2
VEGFB-203ENST00000541681 CETPP11597 493 aa7.56□□□□□ -1.2
VEGFB-203ENST00000541681 XBP1P17861 261 aa7.56□□□□□ -1.2
VEGFB-203ENST00000541681 RXRAP19793 462 aa7.56□□□□□ -1.2
VEGFB-203ENST00000541681 INPP5BP32019 993 aa7.56□□□□□ -1.2
VEGFB-203ENST00000541681 BTDP43251 543 aa7.56□□□□□ -1.2
VEGFB-203ENST00000541681 CCDC173Q0VFZ6 552 aa7.56□□□□□ -1.2
VEGFB-203ENST00000541681 TROAPQ12815 778 aa7.56□□□□□ -1.2
VEGFB-203ENST00000541681 NFIAQ12857 509 aa7.56□□□□□ -1.2
VEGFB-203ENST00000541681 SNAPC2Q13487 334 aa7.56□□□□□ -1.2
VEGFB-203ENST00000541681 PICALMQ13492 652 aa7.56□□□□□ -1.2
VEGFB-203ENST00000541681 ADALQ6DHV7 355 aa7.56□□□□□ -1.2
VEGFB-203ENST00000541681 CDC42EP5Q6NZY7 148 aa7.56□□□□□ -1.2
VEGFB-203ENST00000541681 HHIPL2Q6UWX4 724 aa7.56□□□□□ -1.2
VEGFB-203ENST00000541681 RBM43Q6ZSC3 357 aaKnown RBP7.56□□□□□ -1.2
VEGFB-203ENST00000541681 FAM83AQ86UY5 434 aa7.56□□□□□ -1.2
VEGFB-203ENST00000541681 DGKHQ86XP1 1220 aa7.56□□□□□ -1.2
VEGFB-203ENST00000541681 ZSCAN29Q8IWY8 852 aaPredicted RBP7.56□□□□□ -1.2
VEGFB-203ENST00000541681 ZNF444Q8N0Y2 327 aaPredicted RBP7.56□□□□□ -1.2
VEGFB-203ENST00000541681 STK11IPQ8N1F8 1099 aa7.56□□□□□ -1.2
VEGFB-203ENST00000541681 KCNG4Q8TDN1 519 aa7.56□□□□□ -1.2
VEGFB-203ENST00000541681 TGFBRAP1Q8WUH2 860 aa7.56□□□□□ -1.2
VEGFB-203ENST00000541681 PHKBQ93100 1093 aa7.56□□□□□ -1.2
VEGFB-203ENST00000541681 MS4A4AQ96JQ5 239 aa7.56□□□□□ -1.2
VEGFB-203ENST00000541681 PPP1R9BQ96SB3 815 aa7.56□□□□□ -1.2
VEGFB-203ENST00000541681 MYL10Q9BUA6 226 aa7.56□□□□□ -1.2
VEGFB-203ENST00000541681 SLC26A6Q9BXS9 759 aa7.56□□□□□ -1.2
VEGFB-203ENST00000541681 NUP62CLQ9H1M0 184 aa7.56□□□□□ -1.2
VEGFB-203ENST00000541681 PTPN22Q9Y2R2 807 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms