RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 CPLX2Q6PUV4 134 aaKnown RBP32.29■■■□□ 2.76
CCM2-218ENST00000541586 ANKS1AQ92625 1134 aa32.29■■■□□ 2.76
CCM2-218ENST00000541586 HHIPL1Q96JK4 782 aa32.29■■■□□ 2.76
CCM2-218ENST00000541586 RASSF10A6NK89 507 aa32.29■■■□□ 2.76
CCM2-218ENST00000541586 TTLL1O95922 423 aa32.29■■■□□ 2.76
CCM2-218ENST00000541586 SPRYD7Q5W111 196 aa32.29■■■□□ 2.76
CCM2-218ENST00000541586 SIAH1Q8IUQ4 282 aa32.29■■■□□ 2.76
CCM2-218ENST00000541586 CCDC102AQ96A19 550 aa32.29■■■□□ 2.76
CCM2-218ENST00000541586 ARHGEF10LQ9HCE6 1279 aa32.29■■■□□ 2.76
CCM2-218ENST00000541586 PLIN4Q96Q06 1357 aa32.28■■■□□ 2.76
CCM2-218ENST00000541586 RAD21O60216 631 aa32.28■■■□□ 2.76
CCM2-218ENST00000541586 F13A1P00488 732 aa32.28■■■□□ 2.76
CCM2-218ENST00000541586 TROAPQ12815 778 aa32.28■■■□□ 2.76
CCM2-218ENST00000541586 PPIL2Q13356 520 aa32.28■■■□□ 2.76
CCM2-218ENST00000541586 FEZ1Q99689 392 aa32.28■■■□□ 2.76
CCM2-218ENST00000541586 ORC3Q9UBD5 711 aaPredicted RBP32.28■■■□□ 2.76
CCM2-218ENST00000541586 A0A1W2PRG0 241 aa32.27■■■□□ 2.76
CCM2-218ENST00000541586 DDAH1O94760 285 aa32.27■■■□□ 2.76
CCM2-218ENST00000541586 CCDC196A0A1B0GTZ2 297 aa32.26■■■□□ 2.76
CCM2-218ENST00000541586 USP17L10C9JJH3 530 aa32.26■■■□□ 2.76
CCM2-218ENST00000541586 CALM1P0DP23 149 aa32.26■■■□□ 2.76
CCM2-218ENST00000541586 CALM2P0DP24 149 aa32.26■■■□□ 2.76
CCM2-218ENST00000541586 CALM3P0DP25 149 aa32.26■■■□□ 2.76
CCM2-218ENST00000541586 MTMR2Q13614 643 aa32.26■■■□□ 2.76
CCM2-218ENST00000541586 WDR18Q9BV38 432 aa32.26■■■□□ 2.76
CCM2-218ENST00000541586 SLC10A3P09131 477 aa32.26■■■□□ 2.75
CCM2-218ENST00000541586 PPP2R5BQ15173 497 aa32.26■■■□□ 2.75
CCM2-218ENST00000541586 ANP32EQ9BTT0 268 aa32.26■■■□□ 2.75
CCM2-218ENST00000541586 KAT14Q9H8E8 782 aa32.26■■■□□ 2.75
CCM2-218ENST00000541586 NYAP2Q9P242 653 aa32.26■■■□□ 2.75
CCM2-218ENST00000541586 PHKBQ93100 1093 aa32.25■■■□□ 2.75
CCM2-218ENST00000541586 CHAMP1Q96JM3 812 aa32.25■■■□□ 2.75
CCM2-218ENST00000541586 CAPNS2Q96L46 248 aa32.25■■■□□ 2.75
CCM2-218ENST00000541586 MTMR7Q9Y216 660 aa32.25■■■□□ 2.75
CCM2-218ENST00000541586 FAM155AB1AL88 458 aaPredicted RBP32.24■■■□□ 2.75
CCM2-218ENST00000541586 ZBTB48P10074 688 aaPredicted RBP32.24■■■□□ 2.75
CCM2-218ENST00000541586 IFNAR1P17181 557 aa32.24■■■□□ 2.75
CCM2-218ENST00000541586 DGKZQ13574 1117 aa32.24■■■□□ 2.75
CCM2-218ENST00000541586 LRRC47Q8N1G4 583 aaKnown RBP32.24■■■□□ 2.75
CCM2-218ENST00000541586 H3BQV1 296 aa32.23■■■□□ 2.75
CCM2-218ENST00000541586 BACE1P56817 501 aa32.23■■■□□ 2.75
CCM2-218ENST00000541586 IFFO2Q5TF58 517 aa32.23■■■□□ 2.75
CCM2-218ENST00000541586 DDX11L8A8MPP1 907 aa32.23■■■□□ 2.75
CCM2-218ENST00000541586 HMGCS2P54868 508 aa32.23■■■□□ 2.75
CCM2-218ENST00000541586 PPP4R3BQ5MIZ7 849 aa32.23■■■□□ 2.75
CCM2-218ENST00000541586 CXCL11O14625 94 aa32.22■■■□□ 2.75
CCM2-218ENST00000541586 FOSBP53539 338 aa32.22■■■□□ 2.75
CCM2-218ENST00000541586 SNAPC2Q13487 334 aa32.22■■■□□ 2.75
CCM2-218ENST00000541586 PNMA1Q8ND90 353 aa32.22■■■□□ 2.75
CCM2-218ENST00000541586 TMEM47Q9BQJ4 181 aa32.22■■■□□ 2.75
CCM2-218ENST00000541586 TMX2Q9Y320 296 aa32.22■■■□□ 2.75
CCM2-218ENST00000541586 MCTP1Q6DN14 999 aa32.21■■■□□ 2.75
CCM2-218ENST00000541586 RBM28Q9NW13 759 aaKnown RBP32.21■■■□□ 2.75
CCM2-218ENST00000541586 KCNH4Q9UQ05 1017 aa32.21■■■□□ 2.75
CCM2-218ENST00000541586 STK36Q9NRP7 1315 aa32.2■■■□□ 2.75
CCM2-218ENST00000541586 NOVP48745 357 aa32.2■■■□□ 2.75
CCM2-218ENST00000541586 GTF2A2P52657 109 aa32.2■■■□□ 2.75
CCM2-218ENST00000541586 SSRP1Q08945 709 aaKnown RBP32.2■■■□□ 2.75
CCM2-218ENST00000541586 FOXD4L6Q3SYB3 417 aaPredicted RBP32.2■■■□□ 2.75
CCM2-218ENST00000541586 FOXD4L3Q6VB84 417 aaPredicted RBP32.2■■■□□ 2.75
CCM2-218ENST00000541586 MKL1Q969V6 931 aa32.2■■■□□ 2.75
CCM2-218ENST00000541586 SH2D4AQ9H788 454 aa32.2■■■□□ 2.75
CCM2-218ENST00000541586 GREB1LQ9C091 1923 aaPredicted RBP32.2■■■□□ 2.75
CCM2-218ENST00000541586 AOC2O75106 756 aa32.2■■■□□ 2.74
CCM2-218ENST00000541586 FMNL1O95466 1100 aaPredicted RBP32.2■■■□□ 2.74
CCM2-218ENST00000541586 VEGFBP49765 207 aa32.2■■■□□ 2.74
CCM2-218ENST00000541586 GADL1Q6ZQY3 521 aa32.2■■■□□ 2.74
CCM2-218ENST00000541586 NBPF11Q86T75 865 aa32.2■■■□□ 2.74
CCM2-218ENST00000541586 FERMT3Q86UX7 667 aa32.2■■■□□ 2.74
CCM2-218ENST00000541586 SPICE1Q8N0Z3 855 aa32.2■■■□□ 2.74
CCM2-218ENST00000541586 CMTR1Q8N1G2 835 aaKnown RBP32.2■■■□□ 2.74
CCM2-218ENST00000541586 ZIC5Q96T25 663 aa32.2■■■□□ 2.74
CCM2-218ENST00000541586 SLC26A6Q9BXS9 759 aa32.2■■■□□ 2.74
CCM2-218ENST00000541586 ATP6V1DQ9Y5K8 247 aa32.2■■■□□ 2.74
CCM2-218ENST00000541586 C19orf81C9J6K1 198 aa32.19■■■□□ 2.74
CCM2-218ENST00000541586 TOP1P11387 765 aaKnown RBP32.19■■■□□ 2.74
CCM2-218ENST00000541586 CTCFLQ8NI51 663 aaPredicted RBP32.19■■■□□ 2.74
CCM2-218ENST00000541586 KIAA1683Q9H0B3 1180 aa32.19■■■□□ 2.74
CCM2-218ENST00000541586 TMOD4Q9NZQ9 345 aa32.19■■■□□ 2.74
CCM2-218ENST00000541586 PHIPQ8WWQ0 1821 aa32.19■■■□□ 2.74
CCM2-218ENST00000541586 GOLGA6L22H0YM25 854 aa32.18■■■□□ 2.74
CCM2-218ENST00000541586 USP14P54578 494 aa32.18■■■□□ 2.74
CCM2-218ENST00000541586 CCDC82Q8N4S0 544 aa32.18■■■□□ 2.74
CCM2-218ENST00000541586 MS4A4AQ96JQ5 239 aa32.18■■■□□ 2.74
CCM2-218ENST00000541586 EMILIN3Q9NT22 766 aa32.18■■■□□ 2.74
CCM2-218ENST00000541586 A0A0G2JLL6 359 aaPredicted RBP32.17■■■□□ 2.74
CCM2-218ENST00000541586 USP17L2Q6R6M4 530 aa32.17■■■□□ 2.74
CCM2-218ENST00000541586 PRRT2Q7Z6L0 340 aaPredicted RBP32.17■■■□□ 2.74
CCM2-218ENST00000541586 C8orf76Q96K31 380 aa32.17■■■□□ 2.74
CCM2-218ENST00000541586 MAP3K14Q99558 947 aa32.17■■■□□ 2.74
CCM2-218ENST00000541586 GOPCQ9HD26 462 aa32.17■■■□□ 2.74
CCM2-218ENST00000541586 CCL15-CCL14A0A0B4J2E2 113 aa32.17■■■□□ 2.74
CCM2-218ENST00000541586 F5H6K3 240 aa32.17■■■□□ 2.74
CCM2-218ENST00000541586 KLRC3Q07444 240 aa32.17■■■□□ 2.74
CCM2-218ENST00000541586 CCL15Q16663 113 aa32.17■■■□□ 2.74
CCM2-218ENST00000541586 KIAA1755Q5JYT7 1200 aa32.17■■■□□ 2.74
CCM2-218ENST00000541586 TRIM22Q8IYM9 498 aa32.17■■■□□ 2.74
CCM2-218ENST00000541586 PLEKHA8P1O95397 391 aa32.16■■■□□ 2.74
CCM2-218ENST00000541586 CETPP11597 493 aa32.16■■■□□ 2.74
CCM2-218ENST00000541586 GUCY1B3Q02153 619 aa32.16■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms