RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 TAB2Q9NYJ8 693 aa16.73■□□□□ 0.27
AC005840.4-201ENST00000541242 WNK3Q9BYP7 1800 aa16.72■□□□□ 0.27
AC005840.4-201ENST00000541242 AKAP11Q9UKA4 1901 aa16.72■□□□□ 0.27
AC005840.4-201ENST00000541242 ERVV-1B6SEH8 477 aa16.72■□□□□ 0.27
AC005840.4-201ENST00000541242 EBAG9O00559 213 aa16.72■□□□□ 0.27
AC005840.4-201ENST00000541242 SHOX2O60902 331 aaPredicted RBP16.72■□□□□ 0.27
AC005840.4-201ENST00000541242 KRT9P35527 623 aa16.72■□□□□ 0.27
AC005840.4-201ENST00000541242 MRPS25P82663 173 aaKnown RBP16.72■□□□□ 0.27
AC005840.4-201ENST00000541242 SWT1Q5T5J6 900 aaKnown RBP16.72■□□□□ 0.27
AC005840.4-201ENST00000541242 CYP26C1Q6V0L0 522 aa16.72■□□□□ 0.27
AC005840.4-201ENST00000541242 CCDC91Q7Z6B0 441 aa16.72■□□□□ 0.27
AC005840.4-201ENST00000541242 MYH13Q9UKX3 1938 aa16.72■□□□□ 0.27
AC005840.4-201ENST00000541242 FAM205CA6NFA0 338 aa16.72■□□□□ 0.27
AC005840.4-201ENST00000541242 PPP1R3GB7ZBB8 358 aa16.72■□□□□ 0.27
AC005840.4-201ENST00000541242 TUBBP07437 444 aa16.72■□□□□ 0.27
AC005840.4-201ENST00000541242 SSRP1Q08945 709 aaKnown RBP16.72■□□□□ 0.27
AC005840.4-201ENST00000541242 CT47A1Q5JQC4 288 aaPredicted RBP16.72■□□□□ 0.27
AC005840.4-201ENST00000541242 SPATA31A1Q5TZJ5 1347 aa16.72■□□□□ 0.27
AC005840.4-201ENST00000541242 PDE8AO60658 829 aa16.71■□□□□ 0.27
AC005840.4-201ENST00000541242 MMP1P03956 469 aa16.71■□□□□ 0.27
AC005840.4-201ENST00000541242 FECHP22830 423 aa16.71■□□□□ 0.27
AC005840.4-201ENST00000541242 PSEN1P49768 467 aa16.71■□□□□ 0.27
AC005840.4-201ENST00000541242 MAP9Q49MG5 647 aa16.71■□□□□ 0.27
AC005840.4-201ENST00000541242 HELBQ8NG08 1087 aaPredicted RBP16.71■□□□□ 0.27
AC005840.4-201ENST00000541242 CEP89Q96ST8 783 aa16.71■□□□□ 0.27
AC005840.4-201ENST00000541242 CXorf56Q9H5V9 222 aa16.71■□□□□ 0.27
AC005840.4-201ENST00000541242 POLD4Q9HCU8 107 aa16.71■□□□□ 0.27
AC005840.4-201ENST00000541242 MARCH10Q8NA82 808 aaPredicted RBP16.71■□□□□ 0.26
AC005840.4-201ENST00000541242 IGDCC4Q8TDY8 1250 aa16.71■□□□□ 0.26
AC005840.4-201ENST00000541242 RRP36Q96EU6 259 aaKnown RBP16.71■□□□□ 0.26
AC005840.4-201ENST00000541242 LY9Q9HBG7 655 aa16.71■□□□□ 0.26
AC005840.4-201ENST00000541242 MYO1AQ9UBC5 1043 aa16.71■□□□□ 0.26
AC005840.4-201ENST00000541242 SAR1BQ9Y6B6 198 aa16.71■□□□□ 0.26
AC005840.4-201ENST00000541242 EPN1Q9Y6I3 576 aaPredicted RBP16.71■□□□□ 0.26
AC005840.4-201ENST00000541242 PDE2AO00408 941 aaPredicted RBP16.7■□□□□ 0.26
AC005840.4-201ENST00000541242 NDUFA10O95299 355 aa16.7■□□□□ 0.26
AC005840.4-201ENST00000541242 GNGT1P63211 74 aa16.7■□□□□ 0.26
AC005840.4-201ENST00000541242 C2orf54Q08AI8 447 aa16.7■□□□□ 0.26
AC005840.4-201ENST00000541242 DDB1Q16531 1140 aa16.7■□□□□ 0.26
AC005840.4-201ENST00000541242 TMEM67Q5HYA8 995 aa16.7■□□□□ 0.26
AC005840.4-201ENST00000541242 SUSD4Q5VX71 490 aa16.7■□□□□ 0.26
AC005840.4-201ENST00000541242 EP400NLQ6ZTU2 488 aa16.7■□□□□ 0.26
AC005840.4-201ENST00000541242 CCDC51Q96ER9 411 aa16.7■□□□□ 0.26
AC005840.4-201ENST00000541242 PAGE5Q96GU1 130 aa16.7■□□□□ 0.26
AC005840.4-201ENST00000541242 CTAGE1Q96RT6 745 aa16.7■□□□□ 0.26
AC005840.4-201ENST00000541242 CABP5Q9NP86 173 aa16.7■□□□□ 0.26
AC005840.4-201ENST00000541242 SRPRBQ9Y5M8 271 aaKnown RBP16.7■□□□□ 0.26
AC005840.4-201ENST00000541242 GRIN2DO15399 1336 aa16.7■□□□□ 0.26
AC005840.4-201ENST00000541242 SNAP23O00161 211 aa16.7■□□□□ 0.26
AC005840.4-201ENST00000541242 GSCP56915 257 aaPredicted RBP16.7■□□□□ 0.26
AC005840.4-201ENST00000541242 FKBP15Q5T1M5 1219 aa16.7■□□□□ 0.26
AC005840.4-201ENST00000541242 CAPS2Q9BXY5 557 aa16.7■□□□□ 0.26
AC005840.4-201ENST00000541242 BLZF1Q9H2G9 400 aa16.7■□□□□ 0.26
AC005840.4-201ENST00000541242 GOLGA6BA6NDN3 693 aa16.69■□□□□ 0.26
AC005840.4-201ENST00000541242 PDE8BO95263 885 aa16.69■□□□□ 0.26
AC005840.4-201ENST00000541242 ZFYP08048 801 aaPredicted RBP16.69■□□□□ 0.26
AC005840.4-201ENST00000541242 PHKA1P46020 1223 aa16.69■□□□□ 0.26
AC005840.4-201ENST00000541242 CRKLP46109 303 aaKnown RBP16.69■□□□□ 0.26
AC005840.4-201ENST00000541242 EZH2Q15910 746 aaKnown RBP16.69■□□□□ 0.26
AC005840.4-201ENST00000541242 ZKSCAN3Q9BRR0 538 aa16.69■□□□□ 0.26
AC005840.4-201ENST00000541242 GNL3LQ9NVN8 582 aaKnown RBP16.69■□□□□ 0.26
AC005840.4-201ENST00000541242 WDR19Q8NEZ3 1342 aa16.69■□□□□ 0.26
AC005840.4-201ENST00000541242 MYH10P35580 1976 aa16.69■□□□□ 0.26
AC005840.4-201ENST00000541242 ATP6V1AP38606 617 aa16.69■□□□□ 0.26
AC005840.4-201ENST00000541242 HERVK_113P62684 666 aa16.69■□□□□ 0.26
AC005840.4-201ENST00000541242 ITPK1Q13572 414 aa16.69■□□□□ 0.26
AC005840.4-201ENST00000541242 SAFBQ15424 915 aaKnown RBP eCLIP16.69■□□□□ 0.26
AC005840.4-201ENST00000541242 CCDC122Q5T0U0 273 aa16.69■□□□□ 0.26
AC005840.4-201ENST00000541242 KANK3Q6NY19 840 aa16.69■□□□□ 0.26
AC005840.4-201ENST00000541242 CCNI2Q6ZMN8 369 aaPredicted RBP16.69■□□□□ 0.26
AC005840.4-201ENST00000541242 PIH1D3Q9NQM4 214 aaKnown RBP16.69■□□□□ 0.26
AC005840.4-201ENST00000541242 MAPK8IP1Q9UQF2 711 aa16.69■□□□□ 0.26
AC005840.4-201ENST00000541242 ITIH6Q6UXX5 1313 aa16.68■□□□□ 0.26
AC005840.4-201ENST00000541242 MYO1FO00160 1098 aa16.68■□□□□ 0.26
AC005840.4-201ENST00000541242 FMNL1O95466 1100 aaPredicted RBP16.68■□□□□ 0.26
AC005840.4-201ENST00000541242 INPP5BP32019 993 aa16.68■□□□□ 0.26
AC005840.4-201ENST00000541242 MAP2K2P36507 400 aa16.68■□□□□ 0.26
AC005840.4-201ENST00000541242 ANKRD20A12PQ8NF67 263 aa16.68■□□□□ 0.26
AC005840.4-201ENST00000541242 CAGE1Q8TC20 777 aa16.68■□□□□ 0.26
AC005840.4-201ENST00000541242 JAKMIP2Q96AA8 810 aa16.68■□□□□ 0.26
AC005840.4-201ENST00000541242 CCDC87Q9NVE4 849 aa16.68■□□□□ 0.26
AC005840.4-201ENST00000541242 MYH6P13533 1939 aa16.68■□□□□ 0.26
AC005840.4-201ENST00000541242 PSMD14O00487 310 aa16.68■□□□□ 0.26
AC005840.4-201ENST00000541242 COPB1P53618 953 aaKnown RBP16.68■□□□□ 0.26
AC005840.4-201ENST00000541242 RILPL1Q5EBL4 403 aa16.68■□□□□ 0.26
AC005840.4-201ENST00000541242 HDAC7Q8WUI4 952 aa16.68■□□□□ 0.26
AC005840.4-201ENST00000541242 FAM107BQ9H098 131 aa16.68■□□□□ 0.26
AC005840.4-201ENST00000541242 SLC12A7Q9Y666 1083 aa16.68■□□□□ 0.26
AC005840.4-201ENST00000541242 CAPN7Q9Y6W3 813 aa16.68■□□□□ 0.26
AC005840.4-201ENST00000541242 MYH14Q7Z406 1995 aaKnown RBP16.67■□□□□ 0.26
AC005840.4-201ENST00000541242 LOC102724428A0A0B4J2F2 783 aa16.67■□□□□ 0.26
AC005840.4-201ENST00000541242 SIK1P57059 783 aa16.67■□□□□ 0.26
AC005840.4-201ENST00000541242 CTDSPL2Q05D32 466 aa16.67■□□□□ 0.26
AC005840.4-201ENST00000541242 PPFIA1Q13136 1202 aa16.67■□□□□ 0.26
AC005840.4-201ENST00000541242 SND1Q7KZF4 910 aaKnown RBP eCLIP16.67■□□□□ 0.26
AC005840.4-201ENST00000541242 SYMPKQ92797 1274 aaKnown RBP16.67■□□□□ 0.26
AC005840.4-201ENST00000541242 TACC3Q9Y6A5 838 aa16.67■□□□□ 0.26
AC005840.4-201ENST00000541242 DUSP10Q9Y6W6 482 aa16.67■□□□□ 0.26
AC005840.4-201ENST00000541242 ABCC12Q96J65 1359 aa16.67■□□□□ 0.26
AC005840.4-201ENST00000541242 NRAPQ86VF7 1730 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms