RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 HERC5Q9UII4 1024 aaKnown RBP10.86□□□□□ -0.67
TRAPPC1-202ENST00000540486 FAM196BA6NMK8 535 aa10.85□□□□□ -0.67
TRAPPC1-202ENST00000540486 STRNO43815 780 aa10.85□□□□□ -0.67
TRAPPC1-202ENST00000540486 ST18O60284 1047 aa10.85□□□□□ -0.67
TRAPPC1-202ENST00000540486 MAP4K4O95819 1239 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC1-202ENST00000540486 SLC5A1P13866 664 aa10.85□□□□□ -0.67
TRAPPC1-202ENST00000540486 ANO1Q5XXA6 986 aa10.85□□□□□ -0.67
TRAPPC1-202ENST00000540486 RNF180Q86T96 592 aa10.85□□□□□ -0.67
TRAPPC1-202ENST00000540486 DPP9Q86TI2 863 aa10.85□□□□□ -0.67
TRAPPC1-202ENST00000540486 PLPP6Q8IY26 295 aa10.85□□□□□ -0.67
TRAPPC1-202ENST00000540486 TMEM199Q8N511 208 aa10.85□□□□□ -0.67
TRAPPC1-202ENST00000540486 LPIN2Q92539 896 aa10.85□□□□□ -0.67
TRAPPC1-202ENST00000540486 SIL1Q9H173 461 aa10.85□□□□□ -0.67
TRAPPC1-202ENST00000540486 MTIF3Q9H2K0 278 aaKnown RBP10.85□□□□□ -0.67
TRAPPC1-202ENST00000540486 GINM1Q9NU53 330 aa10.85□□□□□ -0.67
TRAPPC1-202ENST00000540486 ZBTB40Q9NUA8 1239 aa10.85□□□□□ -0.67
TRAPPC1-202ENST00000540486 GNL3LQ9NVN8 582 aaKnown RBP10.85□□□□□ -0.67
TRAPPC1-202ENST00000540486 NDUFB9Q9Y6M9 179 aa10.85□□□□□ -0.67
TRAPPC1-202ENST00000540486 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC1-202ENST00000540486 CNMDO75829 334 aa10.84□□□□□ -0.67
TRAPPC1-202ENST00000540486 CIAO1O76071 339 aa10.84□□□□□ -0.67
TRAPPC1-202ENST00000540486 ALADP13716 330 aa10.84□□□□□ -0.67
TRAPPC1-202ENST00000540486 HOXB3P14651 431 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC1-202ENST00000540486 RRP1BQ14684 758 aaKnown RBP10.84□□□□□ -0.67
TRAPPC1-202ENST00000540486 CSPP1Q1MSJ5 1256 aa10.84□□□□□ -0.67
TRAPPC1-202ENST00000540486 ZNF365Q70YC5 407 aa10.84□□□□□ -0.67
TRAPPC1-202ENST00000540486 SSH3Q8TE77 659 aa10.84□□□□□ -0.67
TRAPPC1-202ENST00000540486 HLA-CQ95604 372 aa10.84□□□□□ -0.67
TRAPPC1-202ENST00000540486 SLC5A4Q9NY91 659 aa10.84□□□□□ -0.67
TRAPPC1-202ENST00000540486 DENND2AQ9ULE3 1009 aa10.84□□□□□ -0.67
TRAPPC1-202ENST00000540486 A0A1W2PQ45 241 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC1-202ENST00000540486 A0A1W2PQY0 241 aa10.83□□□□□ -0.68
TRAPPC1-202ENST00000540486 SEMA3EO15041 775 aa10.83□□□□□ -0.68
TRAPPC1-202ENST00000540486 BTDP43251 543 aa10.83□□□□□ -0.68
TRAPPC1-202ENST00000540486 FAM47AQ5JRC9 791 aa10.83□□□□□ -0.68
TRAPPC1-202ENST00000540486 CEP85Q6P2H3 762 aa10.83□□□□□ -0.68
TRAPPC1-202ENST00000540486 USP17L2Q6R6M4 530 aa10.83□□□□□ -0.68
TRAPPC1-202ENST00000540486 LBX2Q6XYB7 198 aa10.83□□□□□ -0.68
TRAPPC1-202ENST00000540486 NUP133Q8WUM0 1156 aa10.83□□□□□ -0.68
TRAPPC1-202ENST00000540486 UIMC1Q96RL1 719 aa10.83□□□□□ -0.68
TRAPPC1-202ENST00000540486 TSEN34Q9BSV6 310 aaKnown RBP10.83□□□□□ -0.68
TRAPPC1-202ENST00000540486 CHD7Q9P2D1 2997 aa10.83□□□□□ -0.68
TRAPPC1-202ENST00000540486 TBX21Q9UL17 535 aa10.83□□□□□ -0.68
TRAPPC1-202ENST00000540486 DDX19BQ9UMR2 479 aa10.83□□□□□ -0.68
TRAPPC1-202ENST00000540486 YBX2Q9Y2T7 364 aaKnown RBP10.83□□□□□ -0.68
TRAPPC1-202ENST00000540486 MTCH2Q9Y6C9 303 aa10.83□□□□□ -0.68
TRAPPC1-202ENST00000540486 PLXNA1Q9UIW2 1896 aa10.83□□□□□ -0.68
TRAPPC1-202ENST00000540486 GPR75-ASB3A0A0A6YYF3 556 aa10.82□□□□□ -0.68
TRAPPC1-202ENST00000540486 USP17L15C9J2P7 530 aa10.82□□□□□ -0.68
TRAPPC1-202ENST00000540486 USP17L13C9JLJ4 530 aa10.82□□□□□ -0.68
TRAPPC1-202ENST00000540486 USP17L11C9JVI0 530 aa10.82□□□□□ -0.68
TRAPPC1-202ENST00000540486 USP17L18D6R9N7 530 aa10.82□□□□□ -0.68
TRAPPC1-202ENST00000540486 USP17L22D6RA61 530 aa10.82□□□□□ -0.68
TRAPPC1-202ENST00000540486 USP17L17D6RBQ6 530 aa10.82□□□□□ -0.68
TRAPPC1-202ENST00000540486 USP17L19D6RCP7 530 aa10.82□□□□□ -0.68
TRAPPC1-202ENST00000540486 USP17L20D6RJB6 530 aa10.82□□□□□ -0.68
TRAPPC1-202ENST00000540486 RARBP10826 455 aa10.82□□□□□ -0.68
TRAPPC1-202ENST00000540486 IL15P40933 162 aaPredicted RBP10.82□□□□□ -0.68
TRAPPC1-202ENST00000540486 RRP1P56182 461 aaKnown RBP10.82□□□□□ -0.68
TRAPPC1-202ENST00000540486 RHBDL3P58872 404 aa10.82□□□□□ -0.68
TRAPPC1-202ENST00000540486 USP17L24Q0WX57 530 aa10.82□□□□□ -0.68
TRAPPC1-202ENST00000540486 PPP2R2DQ66LE6 453 aa10.82□□□□□ -0.68
TRAPPC1-202ENST00000540486 DZIP1Q86YF9 867 aaKnown RBP10.82□□□□□ -0.68
TRAPPC1-202ENST00000540486 SIRT2Q8IXJ6 389 aa10.82□□□□□ -0.68
TRAPPC1-202ENST00000540486 XPNPEP3Q9NQH7 507 aa10.82□□□□□ -0.68
TRAPPC1-202ENST00000540486 EMILIN3Q9NT22 766 aa10.82□□□□□ -0.68
TRAPPC1-202ENST00000540486 PI4KBQ9UBF8 816 aa10.82□□□□□ -0.68
TRAPPC1-202ENST00000540486 NRBP1Q9UHY1 535 aa10.82□□□□□ -0.68
TRAPPC1-202ENST00000540486 MROH7Q68CQ1 1323 aa10.82□□□□□ -0.68
TRAPPC1-202ENST00000540486 FGBP02675 491 aa10.81□□□□□ -0.68
TRAPPC1-202ENST00000540486 CSF2RAP15509 400 aa10.81□□□□□ -0.68
TRAPPC1-202ENST00000540486 ADORA2AP29274 412 aa10.81□□□□□ -0.68
TRAPPC1-202ENST00000540486 TIMM10P62072 90 aa10.81□□□□□ -0.68
TRAPPC1-202ENST00000540486 TFCP2Q12800 502 aa10.81□□□□□ -0.68
TRAPPC1-202ENST00000540486 CAMK2BQ13554 666 aa10.81□□□□□ -0.68
TRAPPC1-202ENST00000540486 SPTY2D1Q68D10 685 aaPredicted RBP10.81□□□□□ -0.68
TRAPPC1-202ENST00000540486 CD320Q9NPF0 282 aa10.81□□□□□ -0.68
TRAPPC1-202ENST00000540486 STARD7Q9NQZ5 370 aa10.81□□□□□ -0.68
TRAPPC1-202ENST00000540486 CEP126Q9P2H0 1117 aa10.81□□□□□ -0.68
TRAPPC1-202ENST00000540486 NOP58Q9Y2X3 529 aaKnown RBP10.81□□□□□ -0.68
TRAPPC1-202ENST00000540486 PCDHA11Q9Y5I1 949 aa10.81□□□□□ -0.68
TRAPPC1-202ENST00000540486 REV3LO60673 3130 aa10.81□□□□□ -0.68
TRAPPC1-202ENST00000540486 SURF6O75683 361 aaKnown RBP10.8□□□□□ -0.68
TRAPPC1-202ENST00000540486 ACRP10323 421 aa10.8□□□□□ -0.68
TRAPPC1-202ENST00000540486 G3BP1Q13283 466 aaKnown RBP eCLIP10.8□□□□□ -0.68
TRAPPC1-202ENST00000540486 PRAMEF19Q5SWL8 479 aa10.8□□□□□ -0.68
TRAPPC1-202ENST00000540486 CATSPERGQ6ZRH7 1159 aa10.8□□□□□ -0.68
TRAPPC1-202ENST00000540486 RPAP2Q8IXW5 612 aaPredicted RBP10.8□□□□□ -0.68
TRAPPC1-202ENST00000540486 GJD3Q8N144 294 aa10.8□□□□□ -0.68
TRAPPC1-202ENST00000540486 C12orf42Q96LP6 360 aa10.8□□□□□ -0.68
TRAPPC1-202ENST00000540486 DHX36Q9H2U1 1008 aaKnown RBP10.8□□□□□ -0.68
TRAPPC1-202ENST00000540486 IL23AQ9NPF7 189 aa10.8□□□□□ -0.68
TRAPPC1-202ENST00000540486 WDR70Q9NW82 654 aa10.8□□□□□ -0.68
TRAPPC1-202ENST00000540486 MROH7-TTC4A0A0A0MT08 1334 aa10.8□□□□□ -0.68
TRAPPC1-202ENST00000540486 PRRC2BQ5JSZ5 2229 aaKnown RBP10.8□□□□□ -0.68
TRAPPC1-202ENST00000540486 MOXD2PA6NHM9 499 aa10.79□□□□□ -0.68
TRAPPC1-202ENST00000540486 PGK1P00558 417 aa10.79□□□□□ -0.68
TRAPPC1-202ENST00000540486 FOXP4Q8IVH2 680 aaPredicted RBP10.79□□□□□ -0.68
TRAPPC1-202ENST00000540486 ZSWIM6Q9HCJ5 1215 aa10.79□□□□□ -0.68
TRAPPC1-202ENST00000540486 BTBD7Q9P203 1132 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms