RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 IQSEC3Q9UPP2 1182 aaPredicted RBP10.92□□□□□ -0.66
CDH13-204ENST00000539548 DUOX1Q9NRD9 1551 aa10.92□□□□□ -0.66
CDH13-204ENST00000539548 hCG_1642624A0A1W2PR95 340 aa10.92□□□□□ -0.66
CDH13-204ENST00000539548 RNF225M0QZC1 329 aaPredicted RBP10.92□□□□□ -0.66
CDH13-204ENST00000539548 DDAH1O94760 285 aa10.92□□□□□ -0.66
CDH13-204ENST00000539548 IGHMBP2P38935 993 aaKnown RBP10.92□□□□□ -0.66
CDH13-204ENST00000539548 PAK1Q13153 545 aa10.92□□□□□ -0.66
CDH13-204ENST00000539548 ZSCAN26Q16670 478 aa10.92□□□□□ -0.66
CDH13-204ENST00000539548 CCDC152Q4G0S7 254 aa10.92□□□□□ -0.66
CDH13-204ENST00000539548 NOM1Q5C9Z4 860 aaKnown RBP10.92□□□□□ -0.66
CDH13-204ENST00000539548 ZNF658Q5TYW1 1059 aaPredicted RBP10.92□□□□□ -0.66
CDH13-204ENST00000539548 TMTC3Q6ZXV5 915 aa10.92□□□□□ -0.66
CDH13-204ENST00000539548 GOLGA5Q8TBA6 731 aa10.92□□□□□ -0.66
CDH13-204ENST00000539548 STAMQ92783 540 aa10.92□□□□□ -0.66
CDH13-204ENST00000539548 RIOK1Q9BRS2 568 aaKnown RBP10.92□□□□□ -0.66
CDH13-204ENST00000539548 VPS16Q9H269 839 aa10.92□□□□□ -0.66
CDH13-204ENST00000539548 PDE11AQ9HCR9 933 aa10.92□□□□□ -0.66
CDH13-204ENST00000539548 RMND1Q9NWS8 449 aa10.92□□□□□ -0.66
CDH13-204ENST00000539548 KCNJ18B7U540 433 aa10.91□□□□□ -0.66
CDH13-204ENST00000539548 ZBTB22O15209 634 aa10.91□□□□□ -0.66
CDH13-204ENST00000539548 ABL1P00519 1130 aa10.91□□□□□ -0.66
CDH13-204ENST00000539548 CAPN2P17655 700 aa10.91□□□□□ -0.66
CDH13-204ENST00000539548 GYS2P54840 703 aa10.91□□□□□ -0.66
CDH13-204ENST00000539548 AMPD2Q01433 879 aa10.91□□□□□ -0.66
CDH13-204ENST00000539548 SLC20A2Q08357 652 aa10.91□□□□□ -0.66
CDH13-204ENST00000539548 KCNJ12Q14500 433 aa10.91□□□□□ -0.66
CDH13-204ENST00000539548 IQCA1Q86XH1 822 aa10.91□□□□□ -0.66
CDH13-204ENST00000539548 NELFBQ8WX92 580 aa10.91□□□□□ -0.66
CDH13-204ENST00000539548 NUP88Q99567 741 aaPredicted RBP10.91□□□□□ -0.66
CDH13-204ENST00000539548 MTRQ99707 1265 aa10.91□□□□□ -0.66
CDH13-204ENST00000539548 BLZF1Q9H2G9 400 aa10.91□□□□□ -0.66
CDH13-204ENST00000539548 MYO6Q9UM54 1294 aa10.91□□□□□ -0.66
CDH13-204ENST00000539548 EPN1Q9Y6I3 576 aaPredicted RBP10.91□□□□□ -0.66
CDH13-204ENST00000539548 BAZ2AQ9UIF9 1905 aaKnown RBP10.91□□□□□ -0.66
CDH13-204ENST00000539548 ZNF804BA4D1E1 1349 aa10.9□□□□□ -0.66
CDH13-204ENST00000539548 CNTNAP5Q8WYK1 1306 aa10.9□□□□□ -0.66
CDH13-204ENST00000539548 H7C1D1 291 aa10.9□□□□□ -0.66
CDH13-204ENST00000539548 SMIM22K7EJ46 135 aa10.9□□□□□ -0.66
CDH13-204ENST00000539548 CDC25AP30304 524 aa10.9□□□□□ -0.66
CDH13-204ENST00000539548 KRT9P35527 623 aa10.9□□□□□ -0.66
CDH13-204ENST00000539548 EIF5P55010 431 aaKnown RBP10.9□□□□□ -0.66
CDH13-204ENST00000539548 CHRNDQ07001 517 aa10.9□□□□□ -0.66
CDH13-204ENST00000539548 RAD51AP2Q09MP3 1159 aa10.9□□□□□ -0.66
CDH13-204ENST00000539548 MCM6Q14566 821 aa10.9□□□□□ -0.66
CDH13-204ENST00000539548 IL17AQ16552 155 aa10.9□□□□□ -0.66
CDH13-204ENST00000539548 ARL6IP4Q66PJ3 421 aaKnown RBP10.9□□□□□ -0.66
CDH13-204ENST00000539548 WDR93Q6P2C0 686 aa10.9□□□□□ -0.66
CDH13-204ENST00000539548 SLF1Q9BQI6 1058 aa10.9□□□□□ -0.66
CDH13-204ENST00000539548 TAB2Q9NYJ8 693 aa10.9□□□□□ -0.66
CDH13-204ENST00000539548 CWC15Q9P013 229 aaKnown RBP10.9□□□□□ -0.66
CDH13-204ENST00000539548 CACNA1SQ13698 1873 aa10.9□□□□□ -0.66
CDH13-204ENST00000539548 RPN1P04843 607 aaKnown RBP10.9□□□□□ -0.66
CDH13-204ENST00000539548 RHOXF2BP0C7M4 288 aa10.9□□□□□ -0.66
CDH13-204ENST00000539548 ACTN2P35609 894 aa10.9□□□□□ -0.66
CDH13-204ENST00000539548 VSNL1P62760 191 aa10.9□□□□□ -0.66
CDH13-204ENST00000539548 PARP10Q53GL7 1025 aa10.9□□□□□ -0.66
CDH13-204ENST00000539548 SRBD1Q8N5C6 995 aaKnown RBP10.9□□□□□ -0.66
CDH13-204ENST00000539548 RHOXF2Q9BQY4 288 aa10.9□□□□□ -0.66
CDH13-204ENST00000539548 GNL3LQ9NVN8 582 aaKnown RBP10.9□□□□□ -0.66
CDH13-204ENST00000539548 PHLPP1O60346 1717 aa10.89□□□□□ -0.67
CDH13-204ENST00000539548 COBLO75128 1261 aa10.89□□□□□ -0.67
CDH13-204ENST00000539548 NDUFA10O95299 355 aa10.89□□□□□ -0.67
CDH13-204ENST00000539548 LONP1P36776 959 aaKnown RBP10.89□□□□□ -0.67
CDH13-204ENST00000539548 LMAN1P49257 510 aa10.89□□□□□ -0.67
CDH13-204ENST00000539548 UBXN1Q04323 297 aa10.89□□□□□ -0.67
CDH13-204ENST00000539548 CASP8Q14790 479 aa10.89□□□□□ -0.67
CDH13-204ENST00000539548 OR8K1Q8NGG5 319 aa10.89□□□□□ -0.67
CDH13-204ENST00000539548 VPS18Q9P253 973 aa10.89□□□□□ -0.67
CDH13-204ENST00000539548 ABCF2Q9UG63 623 aa10.89□□□□□ -0.67
CDH13-204ENST00000539548 LAMB2P55268 1798 aa10.89□□□□□ -0.67
CDH13-204ENST00000539548 KAT6BQ8WYB5 2073 aa10.89□□□□□ -0.67
CDH13-204ENST00000539548 CICQ96RK0 1608 aaPredicted RBP10.89□□□□□ -0.67
CDH13-204ENST00000539548 CYP2D7A0A087X1C5 515 aa10.89□□□□□ -0.67
CDH13-204ENST00000539548 A0A1W2PQC6 194 aa10.89□□□□□ -0.67
CDH13-204ENST00000539548 PSMD14O00487 310 aa10.89□□□□□ -0.67
CDH13-204ENST00000539548 RPS6KA5O75582 802 aa10.89□□□□□ -0.67
CDH13-204ENST00000539548 TFRCP02786 760 aaKnown RBP10.89□□□□□ -0.67
CDH13-204ENST00000539548 SCG2P13521 617 aa10.89□□□□□ -0.67
CDH13-204ENST00000539548 PRCPP42785 496 aa10.89□□□□□ -0.67
CDH13-204ENST00000539548 NLRP5P59047 1200 aa10.89□□□□□ -0.67
CDH13-204ENST00000539548 SEMA3FQ13275 785 aa10.89□□□□□ -0.67
CDH13-204ENST00000539548 ZNF662Q6ZS27 426 aa10.89□□□□□ -0.67
CDH13-204ENST00000539548 IRF2BP1Q8IU81 584 aa10.89□□□□□ -0.67
CDH13-204ENST00000539548 MB21D1Q8N884 522 aa10.89□□□□□ -0.67
CDH13-204ENST00000539548 C4orf32Q8N8J7 132 aa10.89□□□□□ -0.67
CDH13-204ENST00000539548 NOA1Q8NC60 698 aaKnown RBP10.89□□□□□ -0.67
CDH13-204ENST00000539548 CTCFLQ8NI51 663 aaPredicted RBP10.89□□□□□ -0.67
CDH13-204ENST00000539548 DNAJC7Q99615 494 aa10.89□□□□□ -0.67
CDH13-204ENST00000539548 CHP1Q99653 195 aa10.89□□□□□ -0.67
CDH13-204ENST00000539548 HAUS4Q9H6D7 363 aa10.89□□□□□ -0.67
CDH13-204ENST00000539548 REXO2Q9Y3B8 237 aaKnown RBP10.89□□□□□ -0.67
CDH13-204ENST00000539548 ORC4O43929 436 aa10.88□□□□□ -0.67
CDH13-204ENST00000539548 PARP1P09874 1014 aaKnown RBP10.88□□□□□ -0.67
CDH13-204ENST00000539548 MCM7P33993 719 aa10.88□□□□□ -0.67
CDH13-204ENST00000539548 DYNLL1P63167 89 aaKnown RBP10.88□□□□□ -0.67
CDH13-204ENST00000539548 PFKFB3Q16875 520 aaPredicted RBP10.88□□□□□ -0.67
CDH13-204ENST00000539548 WWC2Q6AWC2 1192 aa10.88□□□□□ -0.67
CDH13-204ENST00000539548 CTR9Q6PD62 1173 aa10.88□□□□□ -0.67
CDH13-204ENST00000539548 PIK3AP1Q6ZUJ8 805 aa10.88□□□□□ -0.67
CDH13-204ENST00000539548 TRAPPC11Q7Z392 1133 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms