RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 ZPBP2Q6X784 338 aa9.41□□□□□ -0.9
CCDC7-208ENST00000537047 ZNF512BQ96KM6 892 aaPredicted RBP9.41□□□□□ -0.9
CCDC7-208ENST00000537047 GZF1Q9H116 711 aaPredicted RBP9.41□□□□□ -0.9
CCDC7-208ENST00000537047 SLC6A17Q9H1V8 727 aa9.41□□□□□ -0.9
CCDC7-208ENST00000537047 CWC22Q9HCG8 908 aaKnown RBP9.41□□□□□ -0.9
CCDC7-208ENST00000537047 KCNQ5Q9NR82 932 aa9.41□□□□□ -0.9
CCDC7-208ENST00000537047 NUAK1O60285 661 aa9.4□□□□□ -0.9
CCDC7-208ENST00000537047 RAG1P15918 1043 aa9.4□□□□□ -0.9
CCDC7-208ENST00000537047 PDE6BP35913 854 aa9.4□□□□□ -0.9
CCDC7-208ENST00000537047 CWF19L2Q2TBE0 894 aaKnown RBP9.4□□□□□ -0.9
CCDC7-208ENST00000537047 IRF2BP1Q8IU81 584 aa9.4□□□□□ -0.9
CCDC7-208ENST00000537047 ANKS4BQ8N8V4 417 aa9.4□□□□□ -0.9
CCDC7-208ENST00000537047 SYTL4Q96C24 671 aaPredicted RBP9.4□□□□□ -0.9
CCDC7-208ENST00000537047 IRF2BPLQ9H1B7 796 aa9.4□□□□□ -0.9
CCDC7-208ENST00000537047 TMEM82A0PJX8 343 aa9.39□□□□□ -0.91
CCDC7-208ENST00000537047 CHMP4BP1P59074 171 aa9.39□□□□□ -0.91
CCDC7-208ENST00000537047 DLG4P78352 724 aa9.39□□□□□ -0.91
CCDC7-208ENST00000537047 CCDC27Q2M243 656 aa9.39□□□□□ -0.91
CCDC7-208ENST00000537047 NBPF12Q5TAG4 269 aaPredicted RBP9.39□□□□□ -0.91
CCDC7-208ENST00000537047 WAPLQ7Z5K2 1190 aa9.39□□□□□ -0.91
CCDC7-208ENST00000537047 SPPL2CQ8IUH8 684 aa9.39□□□□□ -0.91
CCDC7-208ENST00000537047 SYTL5Q8TDW5 730 aaPredicted RBP9.39□□□□□ -0.91
CCDC7-208ENST00000537047 ZNF296Q8WUU4 475 aaPredicted RBP9.39□□□□□ -0.91
CCDC7-208ENST00000537047 TCTN2Q96GX1 697 aa9.39□□□□□ -0.91
CCDC7-208ENST00000537047 LRRC3Q9BY71 257 aa9.39□□□□□ -0.91
CCDC7-208ENST00000537047 ANTXR1Q9H6X2 564 aa9.39□□□□□ -0.91
CCDC7-208ENST00000537047 ZNF552Q9H707 407 aaPredicted RBP9.39□□□□□ -0.91
CCDC7-208ENST00000537047 UBP1Q9NZI7 540 aa9.39□□□□□ -0.91
CCDC7-208ENST00000537047 GMIPQ9P107 970 aa9.39□□□□□ -0.91
CCDC7-208ENST00000537047 ADAMTS1Q9UHI8 967 aa9.39□□□□□ -0.91
CCDC7-208ENST00000537047 RAPGEFL1Q9UHV5 662 aa9.39□□□□□ -0.91
CCDC7-208ENST00000537047 FKTNO75072 461 aa9.38□□□□□ -0.91
CCDC7-208ENST00000537047 INHBBP09529 407 aa9.38□□□□□ -0.91
CCDC7-208ENST00000537047 CHRNEQ04844 493 aa9.38□□□□□ -0.91
CCDC7-208ENST00000537047 CLCQ05315 142 aa9.38□□□□□ -0.91
CCDC7-208ENST00000537047 DUSP4Q13115 394 aa9.38□□□□□ -0.91
CCDC7-208ENST00000537047 NBPF9Q3BBW0 867 aa9.38□□□□□ -0.91
CCDC7-208ENST00000537047 ASCC2Q9H1I8 757 aaPredicted RBP9.38□□□□□ -0.91
CCDC7-208ENST00000537047 GCM1Q9NP62 436 aa9.38□□□□□ -0.91
CCDC7-208ENST00000537047 ZMYM5Q9UJ78 669 aa9.38□□□□□ -0.91
CCDC7-208ENST00000537047 SUPT16HQ9Y5B9 1047 aaKnown RBP9.38□□□□□ -0.91
CCDC7-208ENST00000537047 ATE1O95260 518 aa9.37□□□□□ -0.91
CCDC7-208ENST00000537047 SDHBP21912 280 aa9.37□□□□□ -0.91
CCDC7-208ENST00000537047 SEZ6Q53EL9 994 aa9.37□□□□□ -0.91
CCDC7-208ENST00000537047 NLRX1Q86UT6 975 aa9.37□□□□□ -0.91
CCDC7-208ENST00000537047 TCFL5Q9UL49 500 aa9.37□□□□□ -0.91
CCDC7-208ENST00000537047 NCANO14594 1321 aa9.36□□□□□ -0.91
CCDC7-208ENST00000537047 PRAMEF1O95521 474 aa9.36□□□□□ -0.91
CCDC7-208ENST00000537047 KIR3DS1Q14943 382 aa9.36□□□□□ -0.91
CCDC7-208ENST00000537047 BBS9Q3SYG4 887 aa9.36□□□□□ -0.91
CCDC7-208ENST00000537047 RNF111Q6ZNA4 994 aa9.36□□□□□ -0.91
CCDC7-208ENST00000537047 GK5Q6ZS86 529 aa9.36□□□□□ -0.91
CCDC7-208ENST00000537047 DAGLBQ8NCG7 672 aa9.36□□□□□ -0.91
CCDC7-208ENST00000537047 ENOX1Q8TC92 643 aaKnown RBP9.36□□□□□ -0.91
CCDC7-208ENST00000537047 ATG4CQ96DT6 458 aa9.36□□□□□ -0.91
CCDC7-208ENST00000537047 PRDM14Q9GZV8 571 aa9.36□□□□□ -0.91
CCDC7-208ENST00000537047 GGT7Q9UJ14 662 aa9.36□□□□□ -0.91
CCDC7-208ENST00000537047 PRRG2O14669 202 aa9.35□□□□□ -0.91
CCDC7-208ENST00000537047 MLECQ14165 292 aa9.35□□□□□ -0.91
CCDC7-208ENST00000537047 SNX17Q15036 470 aa9.35□□□□□ -0.91
CCDC7-208ENST00000537047 ADGRF1Q5T601 910 aa9.35□□□□□ -0.91
CCDC7-208ENST00000537047 CDCP2Q5VXM1 449 aa9.35□□□□□ -0.91
CCDC7-208ENST00000537047 TMEM132EQ6IEE7 984 aa9.35□□□□□ -0.91
CCDC7-208ENST00000537047 MAP6Q96JE9 813 aa9.35□□□□□ -0.91
CCDC7-208ENST00000537047 HHIPL1Q96JK4 782 aa9.35□□□□□ -0.91
CCDC7-208ENST00000537047 CNNM2Q9H8M5 875 aa9.35□□□□□ -0.91
CCDC7-208ENST00000537047 EHMT1Q9H9B1 1298 aa9.35□□□□□ -0.91
CCDC7-208ENST00000537047 ROBO2Q9HCK4 1378 aa9.35□□□□□ -0.91
CCDC7-208ENST00000537047 B8ZZF3 427 aa9.34□□□□□ -0.91
CCDC7-208ENST00000537047 PEX10O60683 326 aa9.34□□□□□ -0.91
CCDC7-208ENST00000537047 SYPP08247 313 aa9.34□□□□□ -0.91
CCDC7-208ENST00000537047 RNF4P78317 190 aa9.34□□□□□ -0.91
CCDC7-208ENST00000537047 TMEM192Q8IY95 271 aa9.34□□□□□ -0.91
CCDC7-208ENST00000537047 GIPC2Q8TF65 315 aa9.34□□□□□ -0.91
CCDC7-208ENST00000537047 PLCD4Q9BRC7 762 aa9.34□□□□□ -0.91
CCDC7-208ENST00000537047 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.34□□□□□ -0.91
CCDC7-208ENST00000537047 TEX51A0A1B0GUA7 166 aa9.33□□□□□ -0.92
CCDC7-208ENST00000537047 MEIS1O00470 390 aa9.33□□□□□ -0.92
CCDC7-208ENST00000537047 MRPL58Q14197 206 aaKnown RBP9.33□□□□□ -0.92
CCDC7-208ENST00000537047 CEP128Q6ZU80 1094 aa9.33□□□□□ -0.92
CCDC7-208ENST00000537047 ZNF655Q8N720 491 aaPredicted RBP9.33□□□□□ -0.92
CCDC7-208ENST00000537047 BCL2L13Q9BXK5 485 aa9.33□□□□□ -0.92
CCDC7-208ENST00000537047 MCM4P33991 863 aa9.32□□□□□ -0.92
CCDC7-208ENST00000537047 PCBP3P57721 371 aaKnown RBP9.32□□□□□ -0.92
CCDC7-208ENST00000537047 SSPNQ14714 243 aa9.32□□□□□ -0.92
CCDC7-208ENST00000537047 LCE5AQ5TCM9 118 aa9.32□□□□□ -0.92
CCDC7-208ENST00000537047 NLRC3Q7RTR2 1065 aa9.32□□□□□ -0.92
CCDC7-208ENST00000537047 LINC00116Q8NCU8 138 aa9.32□□□□□ -0.92
CCDC7-208ENST00000537047 SSU72P8A0A1W2PR75 194 aa9.31□□□□□ -0.92
CCDC7-208ENST00000537047 NRDCO43847 1150 aa9.31□□□□□ -0.92
CCDC7-208ENST00000537047 SEMA7AO75326 666 aa9.31□□□□□ -0.92
CCDC7-208ENST00000537047 ERCC3P19447 782 aa9.31□□□□□ -0.92
CCDC7-208ENST00000537047 SLC14A2Q15849 920 aa9.31□□□□□ -0.92
CCDC7-208ENST00000537047 PANK1Q8TE04 598 aa9.31□□□□□ -0.92
CCDC7-208ENST00000537047 C20orf173Q96LM9 149 aa9.31□□□□□ -0.92
CCDC7-208ENST00000537047 OR14I1A6ND48 311 aa9.3□□□□□ -0.92
CCDC7-208ENST00000537047 FAM86C2PA6NEL3 165 aa9.3□□□□□ -0.92
CCDC7-208ENST00000537047 SIGLEC6O43699 453 aa9.3□□□□□ -0.92
CCDC7-208ENST00000537047 CLEC3AO75596 197 aa9.3□□□□□ -0.92
CCDC7-208ENST00000537047 HOXA5P20719 270 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms