RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 GSDMAQ96QA5 445 aa21.83■■□□□ 1.08
CAPN1-226ENST00000533820 LRP6O75581 1613 aa21.83■■□□□ 1.08
CAPN1-226ENST00000533820 SLIT2O94813 1529 aa21.83■■□□□ 1.08
CAPN1-226ENST00000533820 SH3RF1Q7Z6J0 888 aa21.82■■□□□ 1.08
CAPN1-226ENST00000533820 CHP1Q99653 195 aa21.82■■□□□ 1.08
CAPN1-226ENST00000533820 ANKZF1Q9H8Y5 726 aa21.82■■□□□ 1.08
CAPN1-226ENST00000533820 CDC23Q9UJX2 597 aa21.82■■□□□ 1.08
CAPN1-226ENST00000533820 SHANK3Q9BYB0 1731 aa21.82■■□□□ 1.08
CAPN1-226ENST00000533820 CTAGE9A4FU28 777 aa21.82■■□□□ 1.08
CAPN1-226ENST00000533820 PRPF3O43395 683 aaKnown RBP21.82■■□□□ 1.08
CAPN1-226ENST00000533820 PHACTR2O75167 634 aa21.82■■□□□ 1.08
CAPN1-226ENST00000533820 CRKLP46109 303 aaKnown RBP21.82■■□□□ 1.08
CAPN1-226ENST00000533820 NPY5RQ15761 445 aa21.82■■□□□ 1.08
CAPN1-226ENST00000533820 IL17AQ16552 155 aa21.82■■□□□ 1.08
CAPN1-226ENST00000533820 TMED8Q6PL24 325 aaPredicted RBP21.82■■□□□ 1.08
CAPN1-226ENST00000533820 C3orf67Q6ZVT6 689 aa21.82■■□□□ 1.08
CAPN1-226ENST00000533820 CCDC24Q8N4L8 307 aa21.82■■□□□ 1.08
CAPN1-226ENST00000533820 NELFBQ8WX92 580 aa21.82■■□□□ 1.08
CAPN1-226ENST00000533820 GPKOWQ92917 476 aaPredicted RBP eCLIP21.82■■□□□ 1.08
CAPN1-226ENST00000533820 PDE11AQ9HCR9 933 aa21.82■■□□□ 1.08
CAPN1-226ENST00000533820 GUCA1BQ9UMX6 200 aa21.82■■□□□ 1.08
CAPN1-226ENST00000533820 MYH6P13533 1939 aa21.82■■□□□ 1.08
CAPN1-226ENST00000533820 NUP98P52948 1817 aa21.82■■□□□ 1.08
CAPN1-226ENST00000533820 KRT9P35527 623 aa21.81■■□□□ 1.08
CAPN1-226ENST00000533820 PBX1P40424 430 aa21.81■■□□□ 1.08
CAPN1-226ENST00000533820 LMAN1P49257 510 aa21.81■■□□□ 1.08
CAPN1-226ENST00000533820 KCNQ4P56696 695 aa21.81■■□□□ 1.08
CAPN1-226ENST00000533820 JAKMIP3Q5VZ66 844 aa21.81■■□□□ 1.08
CAPN1-226ENST00000533820 FERMT2Q96AC1 680 aa21.81■■□□□ 1.08
CAPN1-226ENST00000533820 MYH8P13535 1937 aa21.81■■□□□ 1.08
CAPN1-226ENST00000533820 PP2D1A8MPX8 630 aa21.81■■□□□ 1.08
CAPN1-226ENST00000533820 ENC1O14682 589 aa21.81■■□□□ 1.08
CAPN1-226ENST00000533820 NCAPH2Q6IBW4 605 aa21.81■■□□□ 1.08
CAPN1-226ENST00000533820 IQUBQ8NA54 791 aa21.81■■□□□ 1.08
CAPN1-226ENST00000533820 CTAGE1Q96RT6 745 aa21.81■■□□□ 1.08
CAPN1-226ENST00000533820 RIOK1Q9BRS2 568 aaKnown RBP21.81■■□□□ 1.08
CAPN1-226ENST00000533820 BCL9O00512 1426 aa21.81■■□□□ 1.08
CAPN1-226ENST00000533820 N4BP1O75113 896 aaKnown RBP21.81■■□□□ 1.08
CAPN1-226ENST00000533820 KLRK1P26718 216 aa21.81■■□□□ 1.08
CAPN1-226ENST00000533820 UBXN1Q04323 297 aa21.81■■□□□ 1.08
CAPN1-226ENST00000533820 CNGA4Q8IV77 575 aa21.81■■□□□ 1.08
CAPN1-226ENST00000533820 CTCFLQ8NI51 663 aaPredicted RBP21.81■■□□□ 1.08
CAPN1-226ENST00000533820 BAZ2AQ9UIF9 1905 aaKnown RBP21.81■■□□□ 1.08
CAPN1-226ENST00000533820 EIF5P55010 431 aaKnown RBP21.8■■□□□ 1.08
CAPN1-226ENST00000533820 CTR9Q6PD62 1173 aa21.8■■□□□ 1.08
CAPN1-226ENST00000533820 RASGRP2Q7LDG7 609 aa21.8■■□□□ 1.08
CAPN1-226ENST00000533820 GPIHBP1Q8IV16 184 aa21.8■■□□□ 1.08
CAPN1-226ENST00000533820 ZNF384Q8TF68 577 aa21.8■■□□□ 1.08
CAPN1-226ENST00000533820 KCNJ18B7U540 433 aa21.79■■□□□ 1.08
CAPN1-226ENST00000533820 COPB1P53618 953 aaKnown RBP21.79■■□□□ 1.08
CAPN1-226ENST00000533820 PAK1Q13153 545 aa21.79■■□□□ 1.08
CAPN1-226ENST00000533820 KCNJ12Q14500 433 aa21.79■■□□□ 1.08
CAPN1-226ENST00000533820 INTS5Q6P9B9 1019 aaKnown RBP21.79■■□□□ 1.08
CAPN1-226ENST00000533820 TMTC3Q6ZXV5 915 aa21.79■■□□□ 1.08
CAPN1-226ENST00000533820 ABCB6Q9NP58 842 aa21.79■■□□□ 1.08
CAPN1-226ENST00000533820 ABHD10Q9NUJ1 306 aa21.79■■□□□ 1.08
CAPN1-226ENST00000533820 CCDC87Q9NVE4 849 aa21.79■■□□□ 1.08
CAPN1-226ENST00000533820 TFCP2L1Q9NZI6 479 aa21.79■■□□□ 1.08
CAPN1-226ENST00000533820 VPS18Q9P253 973 aa21.79■■□□□ 1.08
CAPN1-226ENST00000533820 NID2Q14112 1375 aa21.79■■□□□ 1.08
CAPN1-226ENST00000533820 E2F4Q16254 413 aa21.78■■□□□ 1.08
CAPN1-226ENST00000533820 NOA1Q8NC60 698 aaKnown RBP21.78■■□□□ 1.08
CAPN1-226ENST00000533820 HINFPQ9BQA5 517 aa21.78■■□□□ 1.08
CAPN1-226ENST00000533820 HDAC6Q9UBN7 1215 aa21.78■■□□□ 1.08
CAPN1-226ENST00000533820 ZNF335Q9H4Z2 1342 aaPredicted RBP21.78■■□□□ 1.08
CAPN1-226ENST00000533820 CCDC151A5D8V7 595 aa21.78■■□□□ 1.08
CAPN1-226ENST00000533820 PRCPP42785 496 aa21.78■■□□□ 1.08
CAPN1-226ENST00000533820 ATP2C1P98194 919 aaPredicted RBP21.78■■□□□ 1.08
CAPN1-226ENST00000533820 NAA15Q9BXJ9 866 aaKnown RBP21.78■■□□□ 1.08
CAPN1-226ENST00000533820 VSNL1P62760 191 aa21.77■■□□□ 1.08
CAPN1-226ENST00000533820 TNFRSF25Q93038 417 aa21.77■■□□□ 1.08
CAPN1-226ENST00000533820 GNL3LQ9NVN8 582 aaKnown RBP21.77■■□□□ 1.08
CAPN1-226ENST00000533820 ADAM21Q9UKJ8 722 aa21.77■■□□□ 1.08
CAPN1-226ENST00000533820 CNTNAP5Q8WYK1 1306 aa21.77■■□□□ 1.08
CAPN1-226ENST00000533820 GUCY2CP25092 1073 aa21.77■■□□□ 1.08
CAPN1-226ENST00000533820 TSPY2A6NKD2 308 aa21.76■■□□□ 1.07
CAPN1-226ENST00000533820 TCP11X2Q5H9J9 407 aa21.76■■□□□ 1.07
CAPN1-226ENST00000533820 CEP112Q8N8E3 955 aa21.76■■□□□ 1.07
CAPN1-226ENST00000533820 GDAP1L1Q96MZ0 367 aa21.76■■□□□ 1.07
CAPN1-226ENST00000533820 NAPGQ99747 312 aaPredicted RBP21.76■■□□□ 1.07
CAPN1-226ENST00000533820 UBXN6Q9BZV1 441 aa21.76■■□□□ 1.07
CAPN1-226ENST00000533820 CAMTA2O94983 1202 aa21.76■■□□□ 1.07
CAPN1-226ENST00000533820 NTSR2O95665 410 aa21.76■■□□□ 1.07
CAPN1-226ENST00000533820 RPN1P04843 607 aaKnown RBP21.76■■□□□ 1.07
CAPN1-226ENST00000533820 SCG2P13521 617 aa21.76■■□□□ 1.07
CAPN1-226ENST00000533820 STAT6P42226 847 aa21.76■■□□□ 1.07
CAPN1-226ENST00000533820 PDXDC2PQ6P474 469 aa21.76■■□□□ 1.07
CAPN1-226ENST00000533820 PMS1P54277 932 aaKnown RBP21.76■■□□□ 1.07
CAPN1-226ENST00000533820 ERFEQ4G0M1 354 aa21.76■■□□□ 1.07
CAPN1-226ENST00000533820 CAVIN4Q5BKX8 364 aa21.76■■□□□ 1.07
CAPN1-226ENST00000533820 ANKRD18AQ8IVF6 992 aa21.76■■□□□ 1.07
CAPN1-226ENST00000533820 ANKRD20A12PQ8NF67 263 aa21.76■■□□□ 1.07
CAPN1-226ENST00000533820 CAPZA3Q96KX2 299 aa21.76■■□□□ 1.07
CAPN1-226ENST00000533820 CEP83Q9Y592 693 aa21.76■■□□□ 1.07
CAPN1-226ENST00000533820 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.75■■□□□ 1.07
CAPN1-226ENST00000533820 CTAGE15A4D2H0 777 aa21.75■■□□□ 1.07
CAPN1-226ENST00000533820 ATP8B1O43520 1251 aa21.75■■□□□ 1.07
CAPN1-226ENST00000533820 SRGAP2O75044 1071 aa21.75■■□□□ 1.07
CAPN1-226ENST00000533820 CTAGE8P0CG41 777 aa21.75■■□□□ 1.07
CAPN1-226ENST00000533820 CTAGE6Q86UF2 777 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 240.2 ms