RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 CTAGE4Q8IX94 777 aa18.78■□□□□ 0.6
CTSB-228ENST00000533455 LAMB1P07942 1786 aa18.78■□□□□ 0.6
CTSB-228ENST00000533455 ZNF804BA4D1E1 1349 aa18.78■□□□□ 0.6
CTSB-228ENST00000533455 CAPN2P17655 700 aa18.78■□□□□ 0.6
CTSB-228ENST00000533455 RAD51AP2Q09MP3 1159 aa18.78■□□□□ 0.6
CTSB-228ENST00000533455 ZSCAN26Q16670 478 aa18.78■□□□□ 0.6
CTSB-228ENST00000533455 ZNF658Q5TYW1 1059 aaPredicted RBP18.78■□□□□ 0.6
CTSB-228ENST00000533455 ANKRD20A12PQ8NF67 263 aa18.78■□□□□ 0.6
CTSB-228ENST00000533455 GOLGA5Q8TBA6 731 aa18.78■□□□□ 0.6
CTSB-228ENST00000533455 RIOK1Q9BRS2 568 aaKnown RBP18.78■□□□□ 0.6
CTSB-228ENST00000533455 ABCB6Q9NP58 842 aa18.78■□□□□ 0.6
CTSB-228ENST00000533455 IGHMBP2P38935 993 aaKnown RBP18.77■□□□□ 0.6
CTSB-228ENST00000533455 NOM1Q5C9Z4 860 aaKnown RBP18.77■□□□□ 0.6
CTSB-228ENST00000533455 TCP11X2Q5H9J9 407 aa18.77■□□□□ 0.6
CTSB-228ENST00000533455 BRIP1Q9BX63 1249 aa18.77■□□□□ 0.6
CTSB-228ENST00000533455 PDE11AQ9HCR9 933 aa18.77■□□□□ 0.6
CTSB-228ENST00000533455 RMND1Q9NWS8 449 aa18.77■□□□□ 0.6
CTSB-228ENST00000533455 SCN7AQ01118 1682 aa18.76■□□□□ 0.59
CTSB-228ENST00000533455 KCNJ18B7U540 433 aa18.76■□□□□ 0.59
CTSB-228ENST00000533455 ZBTB22O15209 634 aa18.76■□□□□ 0.59
CTSB-228ENST00000533455 KCNJ12Q14500 433 aa18.76■□□□□ 0.59
CTSB-228ENST00000533455 CCDC152Q4G0S7 254 aa18.76■□□□□ 0.59
CTSB-228ENST00000533455 MTRQ99707 1265 aa18.76■□□□□ 0.59
CTSB-228ENST00000533455 IQSEC3Q9UPP2 1182 aaPredicted RBP18.76■□□□□ 0.59
CTSB-228ENST00000533455 hCG_1642624A0A1W2PR95 340 aa18.76■□□□□ 0.59
CTSB-228ENST00000533455 RNF225M0QZC1 329 aaPredicted RBP18.76■□□□□ 0.59
CTSB-228ENST00000533455 VSNL1P62760 191 aa18.76■□□□□ 0.59
CTSB-228ENST00000533455 IQCA1Q86XH1 822 aa18.76■□□□□ 0.59
CTSB-228ENST00000533455 NELFBQ8WX92 580 aa18.76■□□□□ 0.59
CTSB-228ENST00000533455 NUP88Q99567 741 aaPredicted RBP18.76■□□□□ 0.59
CTSB-228ENST00000533455 VPS16Q9H269 839 aa18.76■□□□□ 0.59
CTSB-228ENST00000533455 BLZF1Q9H2G9 400 aa18.76■□□□□ 0.59
CTSB-228ENST00000533455 TAB2Q9NYJ8 693 aa18.76■□□□□ 0.59
CTSB-228ENST00000533455 ABL1P00519 1130 aa18.75■□□□□ 0.59
CTSB-228ENST00000533455 GYS2P54840 703 aa18.75■□□□□ 0.59
CTSB-228ENST00000533455 STAMQ92783 540 aa18.75■□□□□ 0.59
CTSB-228ENST00000533455 CWC15Q9P013 229 aaKnown RBP18.75■□□□□ 0.59
CTSB-228ENST00000533455 COL1A1P02452 1464 aaPredicted RBP18.74■□□□□ 0.59
CTSB-228ENST00000533455 SMIM22K7EJ46 135 aa18.74■□□□□ 0.59
CTSB-228ENST00000533455 KRT9P35527 623 aa18.74■□□□□ 0.59
CTSB-228ENST00000533455 CHRNDQ07001 517 aa18.74■□□□□ 0.59
CTSB-228ENST00000533455 MCM6Q14566 821 aa18.74■□□□□ 0.59
CTSB-228ENST00000533455 WDR93Q6P2C0 686 aa18.74■□□□□ 0.59
CTSB-228ENST00000533455 MYO6Q9UM54 1294 aa18.74■□□□□ 0.59
CTSB-228ENST00000533455 RHOXF2BP0C7M4 288 aa18.74■□□□□ 0.59
CTSB-228ENST00000533455 CDC25AP30304 524 aa18.74■□□□□ 0.59
CTSB-228ENST00000533455 LMAN1P49257 510 aa18.74■□□□□ 0.59
CTSB-228ENST00000533455 EIF5P55010 431 aaKnown RBP18.74■□□□□ 0.59
CTSB-228ENST00000533455 IL17AQ16552 155 aa18.74■□□□□ 0.59
CTSB-228ENST00000533455 ARL6IP4Q66PJ3 421 aaKnown RBP18.74■□□□□ 0.59
CTSB-228ENST00000533455 RHOXF2Q9BQY4 288 aa18.74■□□□□ 0.59
CTSB-228ENST00000533455 H7C1D1 291 aa18.73■□□□□ 0.59
CTSB-228ENST00000533455 RPN1P04843 607 aaKnown RBP18.73■□□□□ 0.59
CTSB-228ENST00000533455 ACTN2P35609 894 aa18.73■□□□□ 0.59
CTSB-228ENST00000533455 CASP8Q14790 479 aa18.73■□□□□ 0.59
CTSB-228ENST00000533455 PARP10Q53GL7 1025 aa18.73■□□□□ 0.59
CTSB-228ENST00000533455 SLF1Q9BQI6 1058 aa18.73■□□□□ 0.59
CTSB-228ENST00000533455 VPS18Q9P253 973 aa18.73■□□□□ 0.59
CTSB-228ENST00000533455 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.73■□□□□ 0.596e-6■■□□□ 13.9
CTSB-228ENST00000533455 REXO2Q9Y3B8 237 aaKnown RBP18.73■□□□□ 0.59
CTSB-228ENST00000533455 EPN1Q9Y6I3 576 aaPredicted RBP18.73■□□□□ 0.59
CTSB-228ENST00000533455 WNK3Q9BYP7 1800 aa18.73■□□□□ 0.59
CTSB-228ENST00000533455 A0A1W2PQC6 194 aa18.73■□□□□ 0.59
CTSB-228ENST00000533455 PSMD14O00487 310 aa18.73■□□□□ 0.59
CTSB-228ENST00000533455 COBLO75128 1261 aa18.73■□□□□ 0.59
CTSB-228ENST00000533455 NDUFA10O95299 355 aa18.73■□□□□ 0.59
CTSB-228ENST00000533455 TFRCP02786 760 aaKnown RBP18.73■□□□□ 0.59
CTSB-228ENST00000533455 LONP1P36776 959 aaKnown RBP18.73■□□□□ 0.59
CTSB-228ENST00000533455 ZNF662Q6ZS27 426 aa18.73■□□□□ 0.59
CTSB-228ENST00000533455 TRAPPC11Q7Z392 1133 aa18.73■□□□□ 0.59
CTSB-228ENST00000533455 SRBD1Q8N5C6 995 aaKnown RBP18.73■□□□□ 0.59
CTSB-228ENST00000533455 FAM71BQ8TC56 605 aa18.73■□□□□ 0.59
CTSB-228ENST00000533455 COL4A1P02462 1669 aa18.73■□□□□ 0.59
CTSB-228ENST00000533455 ORC4O43929 436 aa18.72■□□□□ 0.59
CTSB-228ENST00000533455 RPS6KA5O75582 802 aa18.72■□□□□ 0.59
CTSB-228ENST00000533455 SCG2P13521 617 aa18.72■□□□□ 0.59
CTSB-228ENST00000533455 PIK3AP1Q6ZUJ8 805 aa18.72■□□□□ 0.59
CTSB-228ENST00000533455 NOA1Q8NC60 698 aaKnown RBP18.72■□□□□ 0.59
CTSB-228ENST00000533455 DNAJC7Q99615 494 aa18.72■□□□□ 0.59
CTSB-228ENST00000533455 ACBD3Q9H3P7 528 aa18.72■□□□□ 0.59
CTSB-228ENST00000533455 HAUS4Q9H6D7 363 aa18.72■□□□□ 0.59
CTSB-228ENST00000533455 PODXL2Q9NZ53 605 aa18.72■□□□□ 0.59
CTSB-228ENST00000533455 FEZ2Q9UHY8 353 aaPredicted RBP18.72■□□□□ 0.59
CTSB-228ENST00000533455 DOT1LQ8TEK3 1739 aa18.72■□□□□ 0.59
CTSB-228ENST00000533455 LGALS16A8MUM7 142 aa18.71■□□□□ 0.59
CTSB-228ENST00000533455 UBXN1Q04323 297 aa18.71■□□□□ 0.59
CTSB-228ENST00000533455 PFKFB3Q16875 520 aaPredicted RBP18.71■□□□□ 0.59
CTSB-228ENST00000533455 IRF2BP1Q8IU81 584 aa18.71■□□□□ 0.59
CTSB-228ENST00000533455 CTCFLQ8NI51 663 aaPredicted RBP18.71■□□□□ 0.59
CTSB-228ENST00000533455 SUGCTQ9HAC7 445 aa18.71■□□□□ 0.59
CTSB-228ENST00000533455 GNL3LQ9NVN8 582 aaKnown RBP18.71■□□□□ 0.59
CTSB-228ENST00000533455 ABCF2Q9UG63 623 aa18.71■□□□□ 0.59
CTSB-228ENST00000533455 CYP2D7A0A087X1C5 515 aa18.71■□□□□ 0.59
CTSB-228ENST00000533455 NTSR2O95665 410 aa18.71■□□□□ 0.59
CTSB-228ENST00000533455 PARP1P09874 1014 aaKnown RBP18.71■□□□□ 0.59
CTSB-228ENST00000533455 PRCPP42785 496 aa18.71■□□□□ 0.59
CTSB-228ENST00000533455 ADSSL1Q8N142 457 aa18.71■□□□□ 0.59
CTSB-228ENST00000533455 MB21D1Q8N884 522 aa18.71■□□□□ 0.59
CTSB-228ENST00000533455 C4orf32Q8N8J7 132 aa18.71■□□□□ 0.59
CTSB-228ENST00000533455 OR8K1Q8NGG5 319 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms