RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 KCNJ14Q9UNX9 436 aa16.69■□□□□ 0.26
CAPN1-224ENST00000533129 MROH5Q6ZUA9 1318 aa16.69■□□□□ 0.26
CAPN1-224ENST00000533129 ZPR1O75312 459 aa16.69■□□□□ 0.26
CAPN1-224ENST00000533129 GUCY1A2P33402 732 aa16.69■□□□□ 0.26
CAPN1-224ENST00000533129 MCAMP43121 646 aa16.69■□□□□ 0.26
CAPN1-224ENST00000533129 ALX1Q15699 326 aa16.69■□□□□ 0.26
CAPN1-224ENST00000533129 MAP9Q49MG5 647 aa16.69■□□□□ 0.26
CAPN1-224ENST00000533129 KLHL10Q6JEL2 608 aa16.69■□□□□ 0.26
CAPN1-224ENST00000533129 USP49Q70CQ1 688 aa16.69■□□□□ 0.26
CAPN1-224ENST00000533129 ZNF512BQ96KM6 892 aaPredicted RBP16.69■□□□□ 0.26
CAPN1-224ENST00000533129 RNF40O75150 1001 aa16.68■□□□□ 0.26
CAPN1-224ENST00000533129 PHACTR2O75167 634 aa16.68■□□□□ 0.26
CAPN1-224ENST00000533129 STX17P56962 302 aa16.68■□□□□ 0.26
CAPN1-224ENST00000533129 ZNF772Q68DY9 489 aaPredicted RBP16.68■□□□□ 0.26
CAPN1-224ENST00000533129 PACS2Q86VP3 889 aa16.68■□□□□ 0.26
CAPN1-224ENST00000533129 VGLL2Q8N8G2 317 aa16.68■□□□□ 0.26
CAPN1-224ENST00000533129 AFAP1L1Q8TED9 768 aa16.68■□□□□ 0.26
CAPN1-224ENST00000533129 BRMS1Q9HCU9 246 aa16.68■□□□□ 0.26
CAPN1-224ENST00000533129 LIMA1Q9UHB6 759 aaKnown RBP16.68■□□□□ 0.26
CAPN1-224ENST00000533129 BRWD3Q6RI45 1802 aa16.68■□□□□ 0.26
CAPN1-224ENST00000533129 COL24A1Q17RW2 1714 aa16.67■□□□□ 0.26
CAPN1-224ENST00000533129 PPP1R3GB7ZBB8 358 aa16.67■□□□□ 0.26
CAPN1-224ENST00000533129 IFIT3O14879 490 aaKnown RBP16.67■□□□□ 0.26
CAPN1-224ENST00000533129 PRPF6O94906 941 aaKnown RBP16.67■□□□□ 0.26
CAPN1-224ENST00000533129 PDE8BO95263 885 aa16.67■□□□□ 0.26
CAPN1-224ENST00000533129 DEXIO95424 95 aa16.67■□□□□ 0.26
CAPN1-224ENST00000533129 ABL1P00519 1130 aa16.67■□□□□ 0.26
CAPN1-224ENST00000533129 IRX3P78415 501 aaPredicted RBP16.67■□□□□ 0.26
CAPN1-224ENST00000533129 PAGE5Q96GU1 130 aa16.67■□□□□ 0.26
CAPN1-224ENST00000533129 NYXQ9GZU5 481 aa16.67■□□□□ 0.26
CAPN1-224ENST00000533129 LRRC10BA6NIK2 292 aa16.67■□□□□ 0.26
CAPN1-224ENST00000533129 SYF2O95926 243 aaKnown RBP16.67■□□□□ 0.26
CAPN1-224ENST00000533129 USP14P54578 494 aa16.67■□□□□ 0.26
CAPN1-224ENST00000533129 DPYDQ12882 1025 aa16.67■□□□□ 0.26
CAPN1-224ENST00000533129 TBC1D9BQ66K14 1250 aa16.67■□□□□ 0.26
CAPN1-224ENST00000533129 TRAPPC11Q7Z392 1133 aa16.67■□□□□ 0.26
CAPN1-224ENST00000533129 CNNM2Q9H8M5 875 aa16.67■□□□□ 0.26
CAPN1-224ENST00000533129 CPP00450 1065 aa16.66■□□□□ 0.26
CAPN1-224ENST00000533129 GTF2A1P52655 376 aaPredicted RBP16.66■□□□□ 0.26
CAPN1-224ENST00000533129 NR5A1Q13285 461 aa16.66■□□□□ 0.26
CAPN1-224ENST00000533129 RTN1Q16799 776 aa16.66■□□□□ 0.26
CAPN1-224ENST00000533129 NCAPH2Q6IBW4 605 aa16.66■□□□□ 0.26
CAPN1-224ENST00000533129 EFCAB13Q8IY85 973 aa16.66■□□□□ 0.26
CAPN1-224ENST00000533129 ZSWIM5Q9P217 1185 aa16.66■□□□□ 0.26
CAPN1-224ENST00000533129 SPAG1Q07617 926 aa16.66■□□□□ 0.26
CAPN1-224ENST00000533129 ARHGEF1Q92888 912 aaKnown RBP16.66■□□□□ 0.26
CAPN1-224ENST00000533129 A0A087X0B3 334 aa16.66■□□□□ 0.26
CAPN1-224ENST00000533129 TARSL2A2RTX5 802 aaKnown RBP16.66■□□□□ 0.26
CAPN1-224ENST00000533129 PSMD14O00487 310 aa16.66■□□□□ 0.26
CAPN1-224ENST00000533129 IGHMBP2P38935 993 aaKnown RBP16.66■□□□□ 0.26
CAPN1-224ENST00000533129 AFMP43652 599 aa16.66■□□□□ 0.26
CAPN1-224ENST00000533129 KRT31Q15323 416 aa16.66■□□□□ 0.26
CAPN1-224ENST00000533129 ERFEQ4G0M1 354 aa16.66■□□□□ 0.26
CAPN1-224ENST00000533129 SLC27A3Q5K4L6 730 aa16.66■□□□□ 0.26
CAPN1-224ENST00000533129 SETDB2Q96T68 719 aa16.66■□□□□ 0.26
CAPN1-224ENST00000533129 SRP68Q9UHB9 627 aaKnown RBP16.66■□□□□ 0.26
CAPN1-224ENST00000533129 HPCAL4Q9UM19 191 aa16.66■□□□□ 0.26
CAPN1-224ENST00000533129 JRKLQ9Y4A0 524 aa16.66■□□□□ 0.26
CAPN1-224ENST00000533129 ZNF532Q9HCE3 1301 aa16.65■□□□□ 0.26
CAPN1-224ENST00000533129 ADRA2BP18089 450 aa16.65■□□□□ 0.26
CAPN1-224ENST00000533129 SF3B3Q15393 1217 aaKnown RBP16.65■□□□□ 0.26
CAPN1-224ENST00000533129 PUM3Q15397 648 aaKnown RBP16.65■□□□□ 0.26
CAPN1-224ENST00000533129 SLC10A5Q5PT55 438 aa16.65■□□□□ 0.26
CAPN1-224ENST00000533129 RPGRIP1Q96KN7 1286 aa16.65■□□□□ 0.26
CAPN1-224ENST00000533129 STRBPQ96SI9 672 aaKnown RBP16.65■□□□□ 0.26
CAPN1-224ENST00000533129 MYH6P13533 1939 aa16.65■□□□□ 0.26
CAPN1-224ENST00000533129 CCDC196A0A1B0GTZ2 297 aa16.65■□□□□ 0.26
CAPN1-224ENST00000533129 N4BP3O15049 544 aa16.65■□□□□ 0.26
CAPN1-224ENST00000533129 PDE6AP16499 860 aa16.65■□□□□ 0.26
CAPN1-224ENST00000533129 RCAN1P53805 252 aa16.65■□□□□ 0.26
CAPN1-224ENST00000533129 DNAJC21Q5F1R6 531 aaKnown RBP16.65■□□□□ 0.26
CAPN1-224ENST00000533129 TRAPPC3LQ5T215 181 aa16.65■□□□□ 0.26
CAPN1-224ENST00000533129 CRACR2BQ8N4Y2 399 aaPredicted RBP16.65■□□□□ 0.26
CAPN1-224ENST00000533129 NUP88Q99567 741 aaPredicted RBP16.65■□□□□ 0.26
CAPN1-224ENST00000533129 SLF1Q9BQI6 1058 aa16.65■□□□□ 0.26
CAPN1-224ENST00000533129 KRT23Q9C075 422 aa16.65■□□□□ 0.26
CAPN1-224ENST00000533129 FAM107BQ9H098 131 aa16.65■□□□□ 0.26
CAPN1-224ENST00000533129 PIH1D3Q9NQM4 214 aaKnown RBP16.65■□□□□ 0.26
CAPN1-224ENST00000533129 ZC3H4Q9UPT8 1303 aaKnown RBP16.65■□□□□ 0.26
CAPN1-224ENST00000533129 TRIM75PA6NK02 468 aa16.64■□□□□ 0.25
CAPN1-224ENST00000533129 HMGB2P26583 209 aaKnown RBP16.64■□□□□ 0.25
CAPN1-224ENST00000533129 CCT6AP40227 531 aaKnown RBP16.64■□□□□ 0.25
CAPN1-224ENST00000533129 BICDL1Q6ZP65 573 aa16.64■□□□□ 0.25
CAPN1-224ENST00000533129 SMIM5Q71RC9 77 aa16.64■□□□□ 0.25
CAPN1-224ENST00000533129 COG1Q8WTW3 980 aa16.64■□□□□ 0.25
CAPN1-224ENST00000533129 ZBTB9Q96C00 473 aa16.64■□□□□ 0.25
CAPN1-224ENST00000533129 CABP5Q9NP86 173 aa16.64■□□□□ 0.25
CAPN1-224ENST00000533129 LRRC4BQ9NT99 713 aa16.64■□□□□ 0.25
CAPN1-224ENST00000533129 CTNND2Q9UQB3 1225 aa16.64■□□□□ 0.25
CAPN1-224ENST00000533129 ARAP2Q8WZ64 1704 aa16.64■□□□□ 0.25
CAPN1-224ENST00000533129 TCRBV5S4A2TA0A5A2 114 aa16.64■□□□□ 0.25
CAPN1-224ENST00000533129 IDH1O75874 414 aaKnown RBP16.64■□□□□ 0.25
CAPN1-224ENST00000533129 RFC4P35249 363 aa16.64■□□□□ 0.25
CAPN1-224ENST00000533129 AKAP17AQ02040 695 aaKnown RBP16.64■□□□□ 0.25
CAPN1-224ENST00000533129 OXER1Q8TDS5 423 aa16.64■□□□□ 0.25
CAPN1-224ENST00000533129 LPIN2Q92539 896 aa16.64■□□□□ 0.25
CAPN1-224ENST00000533129 FERMT2Q96AC1 680 aa16.64■□□□□ 0.25
CAPN1-224ENST00000533129 EPSTI1Q96J88 318 aa16.64■□□□□ 0.25
CAPN1-224ENST00000533129 SHOX2O60902 331 aaPredicted RBP16.63■□□□□ 0.25
CAPN1-224ENST00000533129 COPB1P53618 953 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms