RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 NSMCE1Q8WV22 266 aa16.4■□□□□ 0.22
PCDHA9-202ENST00000532602 ZFP91Q96JP5 570 aaPredicted RBP16.4■□□□□ 0.22
PCDHA9-202ENST00000532602 BCRP11274 1271 aa16.4■□□□□ 0.22
PCDHA9-202ENST00000532602 UTP14CQ5TAP6 766 aaKnown RBP16.4■□□□□ 0.22
PCDHA9-202ENST00000532602 ADCY9O60503 1353 aa16.4■□□□□ 0.22
PCDHA9-202ENST00000532602 SPHKAPQ2M3C7 1700 aa16.39■□□□□ 0.21
PCDHA9-202ENST00000532602 LRMPQ12912 555 aa16.39■□□□□ 0.21
PCDHA9-202ENST00000532602 POSTNQ15063 836 aa16.39■□□□□ 0.21
PCDHA9-202ENST00000532602 SYT10Q6XYQ8 523 aa16.39■□□□□ 0.21
PCDHA9-202ENST00000532602 MCF2L2Q86YR7 1114 aa16.39■□□□□ 0.21
PCDHA9-202ENST00000532602 KRT222Q8N1A0 295 aa16.39■□□□□ 0.21
PCDHA9-202ENST00000532602 TAB2Q9NYJ8 693 aa16.39■□□□□ 0.21
PCDHA9-202ENST00000532602 SERTAD1Q9UHV2 236 aa16.39■□□□□ 0.21
PCDHA9-202ENST00000532602 POLA2Q14181 598 aa16.39■□□□□ 0.21
PCDHA9-202ENST00000532602 RASA3Q14644 834 aa16.39■□□□□ 0.21
PCDHA9-202ENST00000532602 SLC9C1Q4G0N8 1177 aa16.39■□□□□ 0.21
PCDHA9-202ENST00000532602 SPOUT1Q5T280 376 aaKnown RBP16.39■□□□□ 0.21
PCDHA9-202ENST00000532602 CD19P15391 556 aa16.39■□□□□ 0.21
PCDHA9-202ENST00000532602 CFAP157Q5JU67 520 aa16.39■□□□□ 0.21
PCDHA9-202ENST00000532602 ZNF365Q70YC5 407 aa16.39■□□□□ 0.21
PCDHA9-202ENST00000532602 ZNF589Q86UQ0 364 aaPredicted RBP16.39■□□□□ 0.21
PCDHA9-202ENST00000532602 NELFBQ8WX92 580 aa16.39■□□□□ 0.21
PCDHA9-202ENST00000532602 TRPC6Q9Y210 931 aa16.39■□□□□ 0.21
PCDHA9-202ENST00000532602 MED23Q9ULK4 1368 aa16.39■□□□□ 0.21
PCDHA9-202ENST00000532602 ACTN4O43707 911 aaKnown RBP16.39■□□□□ 0.21
PCDHA9-202ENST00000532602 CCDC84Q86UT8 332 aaPredicted RBP16.39■□□□□ 0.21
PCDHA9-202ENST00000532602 ANKRD35Q8N283 1001 aa16.39■□□□□ 0.21
PCDHA9-202ENST00000532602 SELENOSQ9BQE4 189 aa16.39■□□□□ 0.21
PCDHA9-202ENST00000532602 ZKSCAN5Q9Y2L8 839 aa16.39■□□□□ 0.21
PCDHA9-202ENST00000532602 H0YCG3 227 aa16.39■□□□□ 0.21
PCDHA9-202ENST00000532602 SLFN13Q68D06 897 aa16.39■□□□□ 0.21
PCDHA9-202ENST00000532602 BLIDQ8IZY5 108 aa16.39■□□□□ 0.21
PCDHA9-202ENST00000532602 FANCBQ8NB91 859 aa16.39■□□□□ 0.21
PCDHA9-202ENST00000532602 DEPTORQ8TB45 409 aa16.39■□□□□ 0.21
PCDHA9-202ENST00000532602 IFT81Q8WYA0 676 aa16.39■□□□□ 0.21
PCDHA9-202ENST00000532602 CLSTN2Q9H4D0 955 aa16.39■□□□□ 0.21
PCDHA9-202ENST00000532602 ANAPC4Q9UJX5 808 aa16.39■□□□□ 0.21
PCDHA9-202ENST00000532602 ZMYM6O95789 1325 aa16.38■□□□□ 0.21
PCDHA9-202ENST00000532602 ATP5DP30049 168 aa16.38■□□□□ 0.21
PCDHA9-202ENST00000532602 FBXO11Q86XK2 927 aa16.38■□□□□ 0.21
PCDHA9-202ENST00000532602 TRIM7Q9C029 511 aa16.38■□□□□ 0.21
PCDHA9-202ENST00000532602 LEMD3Q9Y2U8 911 aa16.38■□□□□ 0.21
PCDHA9-202ENST00000532602 POLR2MP0CAP2 368 aa16.38■□□□□ 0.21
PCDHA9-202ENST00000532602 SLC16A2P36021 539 aa16.38■□□□□ 0.21
PCDHA9-202ENST00000532602 DCUN1D2Q6PH85 259 aa16.38■□□□□ 0.21
PCDHA9-202ENST00000532602 SMC1BQ8NDV3 1235 aa16.38■□□□□ 0.21
PCDHA9-202ENST00000532602 GLI2P10070 1586 aa16.38■□□□□ 0.21
PCDHA9-202ENST00000532602 SMIM5Q71RC9 77 aa16.38■□□□□ 0.21
PCDHA9-202ENST00000532602 NR1I2O75469 434 aa16.38■□□□□ 0.21
PCDHA9-202ENST00000532602 PRPF6O94906 941 aaKnown RBP16.38■□□□□ 0.21
PCDHA9-202ENST00000532602 CYP26C1Q6V0L0 522 aa16.38■□□□□ 0.21
PCDHA9-202ENST00000532602 RNF169Q8NCN4 708 aa16.38■□□□□ 0.21
PCDHA9-202ENST00000532602 TM6SF1Q9BZW5 370 aa16.38■□□□□ 0.21
PCDHA9-202ENST00000532602 RBSNQ9H1K0 784 aa16.38■□□□□ 0.21
PCDHA9-202ENST00000532602 TLDC2A0PJX2 215 aa16.37■□□□□ 0.21
PCDHA9-202ENST00000532602 CIAO1O76071 339 aa16.37■□□□□ 0.21
PCDHA9-202ENST00000532602 RHOXF2BP0C7M4 288 aa16.37■□□□□ 0.21
PCDHA9-202ENST00000532602 IGBP1P78318 339 aa16.37■□□□□ 0.21
PCDHA9-202ENST00000532602 ZBTB8OSQ8IWT0 167 aa16.37■□□□□ 0.21
PCDHA9-202ENST00000532602 IQCDQ96DY2 449 aa16.37■□□□□ 0.21
PCDHA9-202ENST00000532602 RHOXF2Q9BQY4 288 aa16.37■□□□□ 0.21
PCDHA9-202ENST00000532602 CCPG1Q9ULG6 757 aa16.37■□□□□ 0.21
PCDHA9-202ENST00000532602 A2ML1A8K2U0 1454 aa16.37■□□□□ 0.21
PCDHA9-202ENST00000532602 C21orf2O43822 256 aa16.37■□□□□ 0.21
PCDHA9-202ENST00000532602 PSMC4P43686 418 aa16.37■□□□□ 0.21
PCDHA9-202ENST00000532602 CLUL1Q15846 466 aa16.37■□□□□ 0.21
PCDHA9-202ENST00000532602 IQGAP3Q86VI3 1631 aa16.37■□□□□ 0.21
PCDHA9-202ENST00000532602 CCT6BQ92526 530 aa16.37■□□□□ 0.21
PCDHA9-202ENST00000532602 PGBD1Q96JS3 809 aa16.37■□□□□ 0.21
PCDHA9-202ENST00000532602 CYP2D7A0A087X1C5 515 aa16.37■□□□□ 0.21
PCDHA9-202ENST00000532602 SH3BP5O60239 455 aa16.37■□□□□ 0.21
PCDHA9-202ENST00000532602 LCORLQ8N3X6 602 aa16.37■□□□□ 0.21
PCDHA9-202ENST00000532602 STIM2Q9P246 746 aa16.37■□□□□ 0.21
PCDHA9-202ENST00000532602 MMP10P09238 476 aa16.37■□□□□ 0.21
PCDHA9-202ENST00000532602 TUBB2AQ13885 445 aa16.37■□□□□ 0.21
PCDHA9-202ENST00000532602 SYNE4Q8N205 404 aa16.37■□□□□ 0.21
PCDHA9-202ENST00000532602 TUBB2BQ9BVA1 445 aa16.37■□□□□ 0.21
PCDHA9-202ENST00000532602 NUCKS1Q9H1E3 243 aaKnown RBP16.37■□□□□ 0.21
PCDHA9-202ENST00000532602 PLA2R1Q13018 1463 aa16.37■□□□□ 0.21
PCDHA9-202ENST00000532602 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.37■□□□□ 0.21
PCDHA9-202ENST00000532602 RTEL1Q9NZ71 1219 aa16.37■□□□□ 0.21
PCDHA9-202ENST00000532602 ALKQ9UM73 1620 aa16.36■□□□□ 0.21
PCDHA9-202ENST00000532602 CYP27B1O15528 508 aa16.36■□□□□ 0.21
PCDHA9-202ENST00000532602 PCP11498 1178 aaKnown RBP16.36■□□□□ 0.21
PCDHA9-202ENST00000532602 HS1BP3Q53T59 392 aa16.36■□□□□ 0.21
PCDHA9-202ENST00000532602 COPRSQ9NQ92 184 aa16.36■□□□□ 0.21
PCDHA9-202ENST00000532602 DDX25Q9UHL0 483 aaKnown RBP16.36■□□□□ 0.21
PCDHA9-202ENST00000532602 CLTCQ00610 1675 aaKnown RBP16.36■□□□□ 0.21
PCDHA9-202ENST00000532602 DYNLL2Q96FJ2 89 aa16.36■□□□□ 0.21
PCDHA9-202ENST00000532602 NLRP12P59046 1061 aa16.36■□□□□ 0.21
PCDHA9-202ENST00000532602 SNAP25P60880 206 aa16.36■□□□□ 0.21
PCDHA9-202ENST00000532602 ADCK5Q3MIX3 580 aa16.36■□□□□ 0.21
PCDHA9-202ENST00000532602 NKIRAS1Q9NYS0 192 aa16.36■□□□□ 0.21
PCDHA9-202ENST00000532602 DIXDC1Q155Q3 683 aa16.36■□□□□ 0.21
PCDHA9-202ENST00000532602 GPBP1Q86WP2 473 aa16.36■□□□□ 0.21
PCDHA9-202ENST00000532602 CBX8Q9HC52 389 aa16.36■□□□□ 0.21
PCDHA9-202ENST00000532602 SERPINA10Q9UK55 444 aa16.36■□□□□ 0.21
PCDHA9-202ENST00000532602 ATP2C2O75185 946 aa16.36■□□□□ 0.21
PCDHA9-202ENST00000532602 RIOK1Q9BRS2 568 aaKnown RBP16.36■□□□□ 0.21
PCDHA9-202ENST00000532602 CTTNBP2NLQ9P2B4 639 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms