RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 EPHB3P54753 998 aa8.62□□□□□ -1.03
PTPRK-220ENST00000531466 DAB2P98082 770 aa8.62□□□□□ -1.03
PTPRK-220ENST00000531466 SLC14A2Q15849 920 aa8.62□□□□□ -1.03
PTPRK-220ENST00000531466 RNF111Q6ZNA4 994 aa8.62□□□□□ -1.03
PTPRK-220ENST00000531466 TMEM151BQ8IW70 566 aa8.62□□□□□ -1.03
PTPRK-220ENST00000531466 USHBP1Q8N6Y0 703 aa8.62□□□□□ -1.03
PTPRK-220ENST00000531466 FAM161BQ96MY7 647 aa8.62□□□□□ -1.03
PTPRK-220ENST00000531466 SDHBP21912 280 aa8.61□□□□□ -1.03
PTPRK-220ENST00000531466 GBP1P32455 592 aa8.61□□□□□ -1.03
PTPRK-220ENST00000531466 NFIXQ14938 502 aa8.61□□□□□ -1.03
PTPRK-220ENST00000531466 VWCEQ96DN2 955 aa8.61□□□□□ -1.03
PTPRK-220ENST00000531466 MAP6Q96JE9 813 aa8.61□□□□□ -1.03
PTPRK-220ENST00000531466 RHOVQ96L33 236 aa8.61□□□□□ -1.03
PTPRK-220ENST00000531466 SIGLEC10Q96LC7 697 aa8.61□□□□□ -1.03
PTPRK-220ENST00000531466 HDAC8Q9BY41 377 aa8.61□□□□□ -1.03
PTPRK-220ENST00000531466 SIRT5Q9NXA8 310 aa8.61□□□□□ -1.03
PTPRK-220ENST00000531466 IRAK3Q9Y616 596 aa8.61□□□□□ -1.03
PTPRK-220ENST00000531466 USP31Q70CQ4 1352 aa8.61□□□□□ -1.03
PTPRK-220ENST00000531466 FAM160A1Q05DH4 1040 aa8.6□□□□□ -1.03
PTPRK-220ENST00000531466 CEP128Q6ZU80 1094 aa8.6□□□□□ -1.03
PTPRK-220ENST00000531466 FBXO27Q8NI29 283 aa8.6□□□□□ -1.03
PTPRK-220ENST00000531466 SYTL5Q8TDW5 730 aaPredicted RBP8.6□□□□□ -1.03
PTPRK-220ENST00000531466 NRDCO43847 1150 aa8.59□□□□□ -1.03
PTPRK-220ENST00000531466 FKTNO75072 461 aa8.59□□□□□ -1.03
PTPRK-220ENST00000531466 SYN1P17600 705 aa8.59□□□□□ -1.03
PTPRK-220ENST00000531466 GBP2P32456 591 aaPredicted RBP8.59□□□□□ -1.03
PTPRK-220ENST00000531466 TMC3Q7Z5M5 1100 aa8.59□□□□□ -1.03
PTPRK-220ENST00000531466 ENOX1Q8TC92 643 aaKnown RBP8.59□□□□□ -1.03
PTPRK-220ENST00000531466 TCTN2Q96GX1 697 aa8.59□□□□□ -1.03
PTPRK-220ENST00000531466 HHIPL1Q96JK4 782 aa8.59□□□□□ -1.03
PTPRK-220ENST00000531466 TMEM74Q96NL1 305 aa8.59□□□□□ -1.03
PTPRK-220ENST00000531466 TCFL5Q9UL49 500 aa8.59□□□□□ -1.03
PTPRK-220ENST00000531466 JAG2Q9Y219 1238 aa8.59□□□□□ -1.03
PTPRK-220ENST00000531466 SSU72P8A0A1W2PR75 194 aa8.58□□□□□ -1.04
PTPRK-220ENST00000531466 TMEM82A0PJX8 343 aa8.58□□□□□ -1.04
PTPRK-220ENST00000531466 VIPR1P32241 457 aa8.58□□□□□ -1.04
PTPRK-220ENST00000531466 AFF3P51826 1226 aaKnown RBP8.58□□□□□ -1.04
PTPRK-220ENST00000531466 SNAP47Q5SQN1 464 aa8.58□□□□□ -1.04
PTPRK-220ENST00000531466 ZPBP2Q6X784 338 aa8.58□□□□□ -1.04
PTPRK-220ENST00000531466 RELL1Q8IUW5 271 aa8.58□□□□□ -1.04
PTPRK-220ENST00000531466 DAGLBQ8NCG7 672 aa8.58□□□□□ -1.04
PTPRK-220ENST00000531466 CNTD2Q9H8S5 307 aa8.58□□□□□ -1.04
PTPRK-220ENST00000531466 CRTAC1Q9NQ79 661 aa8.58□□□□□ -1.04
PTPRK-220ENST00000531466 RGS13O14921 159 aa8.57□□□□□ -1.04
PTPRK-220ENST00000531466 UBOX5O94941 541 aa8.57□□□□□ -1.04
PTPRK-220ENST00000531466 KIR2DL1P43626 348 aaPredicted RBP8.57□□□□□ -1.04
PTPRK-220ENST00000531466 KIR2DL2P43627 348 aaPredicted RBP8.57□□□□□ -1.04
PTPRK-220ENST00000531466 PCBP3P57721 371 aaKnown RBP8.57□□□□□ -1.04
PTPRK-220ENST00000531466 XPCQ01831 940 aaPredicted RBP8.57□□□□□ -1.04
PTPRK-220ENST00000531466 GOLM1Q8NBJ4 401 aa8.57□□□□□ -1.04
PTPRK-220ENST00000531466 DACT3Q96B18 629 aaPredicted RBP8.57□□□□□ -1.04
PTPRK-220ENST00000531466 PLCD4Q9BRC7 762 aa8.57□□□□□ -1.04
PTPRK-220ENST00000531466 XYLT2Q9H1B5 865 aa8.57□□□□□ -1.04
PTPRK-220ENST00000531466 RTEL1Q9NZ71 1219 aa8.57□□□□□ -1.04
PTPRK-220ENST00000531466 MINDY4BA8MYZ0 360 aa8.56□□□□□ -1.04
PTPRK-220ENST00000531466 HRKO00198 91 aa8.56□□□□□ -1.04
PTPRK-220ENST00000531466 SASH1O94885 1247 aa8.56□□□□□ -1.04
PTPRK-220ENST00000531466 SYPP08247 313 aa8.56□□□□□ -1.04
PTPRK-220ENST00000531466 RNF4P78317 190 aa8.56□□□□□ -1.04
PTPRK-220ENST00000531466 SNW1Q13573 536 aaKnown RBP8.56□□□□□ -1.04
PTPRK-220ENST00000531466 VMACQ2NL98 169 aa8.56□□□□□ -1.04
PTPRK-220ENST00000531466 ARSHQ5FYA8 562 aa8.56□□□□□ -1.04
PTPRK-220ENST00000531466 REC114Q7Z4M0 266 aa8.56□□□□□ -1.04
PTPRK-220ENST00000531466 EPB41L4AQ9HCS5 686 aaPredicted RBP8.56□□□□□ -1.04
PTPRK-220ENST00000531466 OTOL1A6NHN0 477 aaPredicted RBP8.55□□□□□ -1.04
PTPRK-220ENST00000531466 N4BP3O15049 544 aa8.55□□□□□ -1.04
PTPRK-220ENST00000531466 TLR3O15455 904 aaKnown RBP8.55□□□□□ -1.04
PTPRK-220ENST00000531466 RAG1P15918 1043 aa8.55□□□□□ -1.04
PTPRK-220ENST00000531466 PNLIPP16233 465 aa8.55□□□□□ -1.04
PTPRK-220ENST00000531466 MPP2Q14168 576 aa8.55□□□□□ -1.04
PTPRK-220ENST00000531466 BBS9Q3SYG4 887 aa8.55□□□□□ -1.04
PTPRK-220ENST00000531466 TMC4Q7Z404 712 aa8.55□□□□□ -1.04
PTPRK-220ENST00000531466 ZNF655Q8N720 491 aaPredicted RBP8.55□□□□□ -1.04
PTPRK-220ENST00000531466 FEZF2Q8TBJ5 459 aa8.55□□□□□ -1.04
PTPRK-220ENST00000531466 CRELD1Q96HD1 420 aa8.55□□□□□ -1.04
PTPRK-220ENST00000531466 CDR1P51861 262 aa8.54□□□□□ -1.04
PTPRK-220ENST00000531466 RTP1P59025 263 aa8.54□□□□□ -1.04
PTPRK-220ENST00000531466 KIR3DS1Q14943 382 aa8.54□□□□□ -1.04
PTPRK-220ENST00000531466 RSRP1Q9BUV0 290 aa8.54□□□□□ -1.04
PTPRK-220ENST00000531466 SLC22A31A6NKX4 558 aa8.53□□□□□ -1.04
PTPRK-220ENST00000531466 YBX1P67809 324 aaKnown RBP8.53□□□□□ -1.04
PTPRK-220ENST00000531466 NBPF9Q3BBW0 867 aa8.53□□□□□ -1.04
PTPRK-220ENST00000531466 LINC00116Q8NCU8 138 aa8.53□□□□□ -1.04
PTPRK-220ENST00000531466 PRAMEF1O95521 474 aa8.52□□□□□ -1.05
PTPRK-220ENST00000531466 GARTP22102 1010 aa8.52□□□□□ -1.05
PTPRK-220ENST00000531466 POLR2BP30876 1174 aaKnown RBP8.52□□□□□ -1.05
PTPRK-220ENST00000531466 MLECQ14165 292 aa8.52□□□□□ -1.05
PTPRK-220ENST00000531466 NBPF12Q5TAG4 269 aaPredicted RBP8.52□□□□□ -1.05
PTPRK-220ENST00000531466 ERICH6Q7L0X2 663 aa8.52□□□□□ -1.05
PTPRK-220ENST00000531466 ZDHHC14Q8IZN3 488 aa8.52□□□□□ -1.05
PTPRK-220ENST00000531466 CXorf38Q8TB03 319 aa8.52□□□□□ -1.05
PTPRK-220ENST00000531466 MZB1Q8WU39 189 aa8.52□□□□□ -1.05
PTPRK-220ENST00000531466 MINPP1Q9UNW1 487 aa8.52□□□□□ -1.05
PTPRK-220ENST00000531466 ADAMTS20P59510 1910 aa8.51□□□□□ -1.05
PTPRK-220ENST00000531466 IRS4O14654 1257 aaPredicted RBP8.51□□□□□ -1.05
PTPRK-220ENST00000531466 ERVFRD-1P60508 538 aa8.51□□□□□ -1.05
PTPRK-220ENST00000531466 PWP1Q13610 501 aa8.51□□□□□ -1.05
PTPRK-220ENST00000531466 SKOR2Q2VWA4 1001 aaPredicted RBP8.51□□□□□ -1.05
PTPRK-220ENST00000531466 OLFML2BQ68BL8 750 aa8.51□□□□□ -1.05
PTPRK-220ENST00000531466 CNKSR3Q6P9H4 555 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms