RNA–Protein interactions for RNA: ENST00000530746.1

PPFIA1-216, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-216ENST00000530746 RRP12Q5JTH9 1297 aaKnown RBP17.68■□□□□ 0.42
PPFIA1-216ENST00000530746 GPR142Q7Z601 462 aa17.68■□□□□ 0.42
PPFIA1-216ENST00000530746 LRRC47Q8N1G4 583 aaKnown RBP17.68■□□□□ 0.42
PPFIA1-216ENST00000530746 GMCL1P1Q8NEA9 526 aa17.68■□□□□ 0.42
PPFIA1-216ENST00000530746 ATG4CQ96DT6 458 aa17.68■□□□□ 0.42
PPFIA1-216ENST00000530746 RNF41Q9H4P4 317 aaPredicted RBP17.68■□□□□ 0.42
PPFIA1-216ENST00000530746 CTNNA3Q9UI47 895 aa17.68■□□□□ 0.42
PPFIA1-216ENST00000530746 STX8Q9UNK0 236 aa17.68■□□□□ 0.42
PPFIA1-216ENST00000530746 NMT2O60551 498 aa17.67■□□□□ 0.42
PPFIA1-216ENST00000530746 ERICH6BQ5W0A0 696 aa17.67■□□□□ 0.42
PPFIA1-216ENST00000530746 PLEKHH3Q7Z736 793 aa17.67■□□□□ 0.42
PPFIA1-216ENST00000530746 TBC1D10CQ8IV04 446 aa17.67■□□□□ 0.42
PPFIA1-216ENST00000530746 SOCS4Q8WXH5 440 aa17.67■□□□□ 0.42
PPFIA1-216ENST00000530746 NUP88Q99567 741 aaPredicted RBP17.67■□□□□ 0.42
PPFIA1-216ENST00000530746 NUDT12Q9BQG2 462 aa17.67■□□□□ 0.42
PPFIA1-216ENST00000530746 SPATC1LQ9H0A9 340 aa17.67■□□□□ 0.42
PPFIA1-216ENST00000530746 FBXO28Q9NVF7 368 aa17.67■□□□□ 0.42
PPFIA1-216ENST00000530746 PPP1R9AQ9ULJ8 1098 aa17.67■□□□□ 0.42
PPFIA1-216ENST00000530746 ADAMTS5Q9UNA0 930 aa17.67■□□□□ 0.42
PPFIA1-216ENST00000530746 MYCP01106 439 aaPredicted RBP17.66■□□□□ 0.42
PPFIA1-216ENST00000530746 ELNP15502 786 aa17.66■□□□□ 0.42
PPFIA1-216ENST00000530746 NOVP48745 357 aa17.66■□□□□ 0.42
PPFIA1-216ENST00000530746 IMMTQ16891 758 aaKnown RBP17.66■□□□□ 0.42
PPFIA1-216ENST00000530746 SAMD1Q6SPF0 538 aaPredicted RBP17.66■□□□□ 0.42
PPFIA1-216ENST00000530746 SKAP1Q86WV1 359 aa17.66■□□□□ 0.42
PPFIA1-216ENST00000530746 TMEM106CQ9BVX2 250 aa17.66■□□□□ 0.42
PPFIA1-216ENST00000530746 CWC22Q9HCG8 908 aaKnown RBP17.66■□□□□ 0.42
PPFIA1-216ENST00000530746 TCP11L1Q9NUJ3 509 aa17.66■□□□□ 0.42
PPFIA1-216ENST00000530746 BIN2Q9UBW5 565 aaPredicted RBP17.66■□□□□ 0.42
PPFIA1-216ENST00000530746 ZNFX1Q9P2E3 1918 aaKnown RBP17.66■□□□□ 0.42
PPFIA1-216ENST00000530746 POTEFA5A3E0 1075 aa17.65■□□□□ 0.42
PPFIA1-216ENST00000530746 SGSM2O43147 1006 aa17.65■□□□□ 0.42
PPFIA1-216ENST00000530746 NT5C2P49902 561 aa17.65■□□□□ 0.42
PPFIA1-216ENST00000530746 UBXN2AP68543 259 aa17.65■□□□□ 0.42
PPFIA1-216ENST00000530746 MORN1Q5T089 497 aa17.65■□□□□ 0.42
PPFIA1-216ENST00000530746 WDR78Q5VTH9 848 aa17.65■□□□□ 0.42
PPFIA1-216ENST00000530746 SLFN13Q68D06 897 aa17.65■□□□□ 0.42
PPFIA1-216ENST00000530746 SLF1Q9BQI6 1058 aa17.65■□□□□ 0.42
PPFIA1-216ENST00000530746 MOV10L1Q9BXT6 1211 aaKnown RBP17.65■□□□□ 0.42
PPFIA1-216ENST00000530746 NEDD4P46934 1319 aa17.65■□□□□ 0.42
PPFIA1-216ENST00000530746 TNRC18O15417 2968 aaPredicted RBP17.64■□□□□ 0.42
PPFIA1-216ENST00000530746 MKI67P46013 3256 aaKnown RBP17.64■□□□□ 0.42
PPFIA1-216ENST00000530746 VWA5AO00534 786 aa17.64■□□□□ 0.41
PPFIA1-216ENST00000530746 BMP3P12645 472 aa17.64■□□□□ 0.41
PPFIA1-216ENST00000530746 XRCC5P13010 732 aaKnown RBP17.64■□□□□ 0.41
PPFIA1-216ENST00000530746 CYP2B6P20813 491 aa17.64■□□□□ 0.41
PPFIA1-216ENST00000530746 MLLT1Q03111 559 aaPredicted RBP17.64■□□□□ 0.41
PPFIA1-216ENST00000530746 PLS1Q14651 629 aa17.64■□□□□ 0.41
PPFIA1-216ENST00000530746 TMEM132BQ14DG7 1078 aa17.64■□□□□ 0.41
PPFIA1-216ENST00000530746 MTFR1Q15390 333 aa17.64■□□□□ 0.41
PPFIA1-216ENST00000530746 BMP2KLQ5H9B9 411 aa17.64■□□□□ 0.41
PPFIA1-216ENST00000530746 PRPF38AQ8NAV1 312 aaKnown RBP17.64■□□□□ 0.41
PPFIA1-216ENST00000530746 SHCBP1Q8NEM2 672 aa17.64■□□□□ 0.41
PPFIA1-216ENST00000530746 ESR2Q92731 530 aa17.64■□□□□ 0.41
PPFIA1-216ENST00000530746 USP6NLQ92738 828 aa17.64■□□□□ 0.41
PPFIA1-216ENST00000530746 IVNS1ABPQ9Y6Y0 642 aa17.64■□□□□ 0.41
PPFIA1-216ENST00000530746 ZNF236Q9UL36 1845 aa17.63■□□□□ 0.41
PPFIA1-216ENST00000530746 INHAP05111 366 aa17.63■□□□□ 0.41
PPFIA1-216ENST00000530746 ERCC3P19447 782 aa17.63■□□□□ 0.41
PPFIA1-216ENST00000530746 PTPREP23469 700 aa17.63■□□□□ 0.41
PPFIA1-216ENST00000530746 RGS2P41220 211 aa17.63■□□□□ 0.41
PPFIA1-216ENST00000530746 NKX2-3Q8TAU0 364 aa17.63■□□□□ 0.41
PPFIA1-216ENST00000530746 GMCL1Q96IK5 515 aa17.63■□□□□ 0.41
PPFIA1-216ENST00000530746 MROH8Q9H579 483 aa17.63■□□□□ 0.41
PPFIA1-216ENST00000530746 FEM1BQ9UK73 627 aa17.63■□□□□ 0.41
PPFIA1-216ENST00000530746 SLC15A5A6NIM6 579 aa17.62■□□□□ 0.41
PPFIA1-216ENST00000530746 HMGCRP04035 888 aa17.62■□□□□ 0.41
PPFIA1-216ENST00000530746 CCL5P13501 91 aa17.62■□□□□ 0.41
PPFIA1-216ENST00000530746 MCCP23508 829 aa17.62■□□□□ 0.41
PPFIA1-216ENST00000530746 SLC1A4P43007 532 aa17.62■□□□□ 0.41
PPFIA1-216ENST00000530746 PTH1RQ03431 593 aa17.62■□□□□ 0.41
PPFIA1-216ENST00000530746 MAP2K5Q13163 448 aa17.62■□□□□ 0.41
PPFIA1-216ENST00000530746 GRB14Q14449 540 aa17.62■□□□□ 0.41
PPFIA1-216ENST00000530746 REPS2Q8NFH8 660 aa17.62■□□□□ 0.41
PPFIA1-216ENST00000530746 TTC14Q96N46 770 aa17.62■□□□□ 0.41
PPFIA1-216ENST00000530746 ZNF214Q9UL59 606 aaPredicted RBP17.62■□□□□ 0.41
PPFIA1-216ENST00000530746 STRNO43815 780 aa17.61■□□□□ 0.41
PPFIA1-216ENST00000530746 SLC25A27O95847 323 aa17.61■□□□□ 0.41
PPFIA1-216ENST00000530746 TOP1P11387 765 aaKnown RBP17.61■□□□□ 0.41
PPFIA1-216ENST00000530746 NCAPG2Q86XI2 1143 aa17.61■□□□□ 0.41
PPFIA1-216ENST00000530746 RIOX2Q8IUF8 465 aa17.61■□□□□ 0.41
PPFIA1-216ENST00000530746 TRMT44Q8IYL2 757 aaKnown RBP17.61■□□□□ 0.41
PPFIA1-216ENST00000530746 TRIB2Q92519 343 aa17.61■□□□□ 0.41
PPFIA1-216ENST00000530746 KIFC2Q96AC6 838 aa17.61■□□□□ 0.41
PPFIA1-216ENST00000530746 APBA2Q99767 749 aa17.61■□□□□ 0.41
PPFIA1-216ENST00000530746 TMEM47Q9BQJ4 181 aa17.61■□□□□ 0.41
PPFIA1-216ENST00000530746 KRT23Q9C075 422 aa17.61■□□□□ 0.41
PPFIA1-216ENST00000530746 RNF208Q9H0X6 261 aa17.61■□□□□ 0.41
PPFIA1-216ENST00000530746 B4E1Z4 1266 aa17.6■□□□□ 0.41
PPFIA1-216ENST00000530746 TMEM232C9JQI7 657 aa17.6■□□□□ 0.41
PPFIA1-216ENST00000530746 KDM4AO75164 1064 aa17.6■□□□□ 0.41
PPFIA1-216ENST00000530746 EN2P19622 333 aaPredicted RBP17.6■□□□□ 0.41
PPFIA1-216ENST00000530746 STAT3P40763 770 aa17.6■□□□□ 0.41
PPFIA1-216ENST00000530746 STAT2P52630 851 aa17.6■□□□□ 0.41
PPFIA1-216ENST00000530746 RCSD1Q6JBY9 416 aa17.6■□□□□ 0.41
PPFIA1-216ENST00000530746 CHURC1Q8WUH1 139 aa17.6■□□□□ 0.41
PPFIA1-216ENST00000530746 UNC93B1Q9H1C4 597 aa17.6■□□□□ 0.41
PPFIA1-216ENST00000530746 CNNM2Q9H8M5 875 aa17.6■□□□□ 0.41
PPFIA1-216ENST00000530746 ISY1Q9ULR0 285 aaKnown RBP17.6■□□□□ 0.41
PPFIA1-216ENST00000530746 U3KPZ7 1027 aaPredicted RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms