RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 PRNPP04156 253 aa11.5□□□□□ -0.57
CCDC90B-217ENST00000530253 HSP90AB1P08238 724 aaKnown RBP11.5□□□□□ -0.57
CCDC90B-217ENST00000530253 NPR3P17342 541 aa11.5□□□□□ -0.57
CCDC90B-217ENST00000530253 TMPOP42166 694 aaKnown RBP11.5□□□□□ -0.57
CCDC90B-217ENST00000530253 C1orf141Q5JVX7 400 aa11.5□□□□□ -0.57
CCDC90B-217ENST00000530253 ACSBG1Q96GR2 724 aa11.5□□□□□ -0.57
CCDC90B-217ENST00000530253 CAMKK2Q96RR4 588 aa11.5□□□□□ -0.57
CCDC90B-217ENST00000530253 ZFYVE1Q9HBF4 777 aa11.5□□□□□ -0.57
CCDC90B-217ENST00000530253 BTAF1O14981 1849 aa11.5□□□□□ -0.57
CCDC90B-217ENST00000530253 ITGB4P16144 1822 aa11.5□□□□□ -0.57
CCDC90B-217ENST00000530253 VIRMAQ69YN4 1812 aaKnown RBP11.49□□□□□ -0.57
CCDC90B-217ENST00000530253 GNAT3A8MTJ3 354 aa11.49□□□□□ -0.57
CCDC90B-217ENST00000530253 RNMTO43148 476 aaKnown RBP11.49□□□□□ -0.57
CCDC90B-217ENST00000530253 GSTM4Q03013 218 aa11.49□□□□□ -0.57
CCDC90B-217ENST00000530253 MPRIPQ6WCQ1 1025 aa11.49□□□□□ -0.57
CCDC90B-217ENST00000530253 FAM9BQ8IZU0 186 aa11.49□□□□□ -0.57
CCDC90B-217ENST00000530253 IL17REQ8NFR9 667 aa11.49□□□□□ -0.57
CCDC90B-217ENST00000530253 LGR6Q9HBX8 967 aa11.49□□□□□ -0.57
CCDC90B-217ENST00000530253 RGPD3A6NKT7 1758 aaPredicted RBP11.49□□□□□ -0.57
CCDC90B-217ENST00000530253 RGPD4Q7Z3J3 1758 aa11.49□□□□□ -0.57
CCDC90B-217ENST00000530253 HTATSF1O43719 755 aaKnown RBP11.48□□□□□ -0.57
CCDC90B-217ENST00000530253 R3HDM1Q15032 1099 aaKnown RBP11.48□□□□□ -0.57
CCDC90B-217ENST00000530253 ABI1Q8IZP0 508 aa11.48□□□□□ -0.57
CCDC90B-217ENST00000530253 RRP7AQ9Y3A4 280 aaKnown RBP11.48□□□□□ -0.57
CCDC90B-217ENST00000530253 KAT6BQ8WYB5 2073 aa11.47□□□□□ -0.57
CCDC90B-217ENST00000530253 NUP188Q5SRE5 1749 aa11.47□□□□□ -0.57
CCDC90B-217ENST00000530253 RREB1Q92766 1687 aa11.47□□□□□ -0.57
CCDC90B-217ENST00000530253 ERVV-2B6SEH9 535 aa11.47□□□□□ -0.57
CCDC90B-217ENST00000530253 APAF1O14727 1248 aa11.47□□□□□ -0.57
CCDC90B-217ENST00000530253 SOX4Q06945 474 aaPredicted RBP11.47□□□□□ -0.57
CCDC90B-217ENST00000530253 DCTN1Q14203 1278 aa11.47□□□□□ -0.57
CCDC90B-217ENST00000530253 FBLIM1Q8WUP2 373 aa11.47□□□□□ -0.57
CCDC90B-217ENST00000530253 CCDC39Q9UFE4 941 aa11.47□□□□□ -0.57
CCDC90B-217ENST00000530253 NEFMP07197 916 aa11.46□□□□□ -0.57
CCDC90B-217ENST00000530253 SSFA2P28290 1259 aa11.46□□□□□ -0.57
CCDC90B-217ENST00000530253 RIPK4P57078 832 aa11.46□□□□□ -0.57
CCDC90B-217ENST00000530253 MCM10Q7L590 875 aa11.46□□□□□ -0.57
CCDC90B-217ENST00000530253 C2CD4AQ8NCU7 369 aaPredicted RBP11.46□□□□□ -0.57
CCDC90B-217ENST00000530253 PIGBQ92521 554 aa11.46□□□□□ -0.57
CCDC90B-217ENST00000530253 EZH1Q92800 747 aaPredicted RBP11.46□□□□□ -0.57
CCDC90B-217ENST00000530253 TBC1D32Q96NH3 1257 aa11.46□□□□□ -0.57
CCDC90B-217ENST00000530253 SLC52A2Q9HAB3 445 aa11.46□□□□□ -0.57
CCDC90B-217ENST00000530253 BSDC1Q9NW68 430 aaPredicted RBP11.46□□□□□ -0.57
CCDC90B-217ENST00000530253 FOXD3Q9UJU5 478 aaPredicted RBP11.46□□□□□ -0.57
CCDC90B-217ENST00000530253 CYP26A1O43174 497 aa11.45□□□□□ -0.58
CCDC90B-217ENST00000530253 ZAR1Q86SH2 424 aa11.45□□□□□ -0.58
CCDC90B-217ENST00000530253 THUMPD2Q9BTF0 503 aaKnown RBP11.45□□□□□ -0.58
CCDC90B-217ENST00000530253 LY75O60449 1722 aa11.45□□□□□ -0.58
CCDC90B-217ENST00000530253 CICQ96RK0 1608 aaPredicted RBP11.45□□□□□ -0.58
CCDC90B-217ENST00000530253 KCPQ6ZWJ8 1503 aa11.45□□□□□ -0.58
CCDC90B-217ENST00000530253 UBR2Q8IWV8 1755 aa11.44□□□□□ -0.58
CCDC90B-217ENST00000530253 DLGAP3O95886 979 aa11.44□□□□□ -0.58
CCDC90B-217ENST00000530253 CYP11A1P05108 521 aa11.44□□□□□ -0.58
CCDC90B-217ENST00000530253 DRD2P14416 443 aa11.44□□□□□ -0.58
CCDC90B-217ENST00000530253 CYP27A1Q02318 531 aa11.44□□□□□ -0.58
CCDC90B-217ENST00000530253 MAP7Q14244 749 aa11.44□□□□□ -0.58
CCDC90B-217ENST00000530253 PEAR1Q5VY43 1037 aaPredicted RBP11.44□□□□□ -0.58
CCDC90B-217ENST00000530253 CDPF1Q6NVV7 123 aa11.44□□□□□ -0.58
CCDC90B-217ENST00000530253 SYTL4Q96C24 671 aaPredicted RBP11.44□□□□□ -0.58
CCDC90B-217ENST00000530253 TMOD3Q9NYL9 352 aa11.44□□□□□ -0.58
CCDC90B-217ENST00000530253 KDM3BQ7LBC6 1761 aa11.44□□□□□ -0.58
CCDC90B-217ENST00000530253 ADH5P11766 374 aa11.43□□□□□ -0.58
CCDC90B-217ENST00000530253 LMOD3Q0VAK6 560 aa11.43□□□□□ -0.58
CCDC90B-217ENST00000530253 MTMR3Q13615 1198 aa11.43□□□□□ -0.58
CCDC90B-217ENST00000530253 CCDC27Q2M243 656 aa11.43□□□□□ -0.58
CCDC90B-217ENST00000530253 TP53INP2Q8IXH6 220 aa11.43□□□□□ -0.58
CCDC90B-217ENST00000530253 AGBL5Q8NDL9 886 aa11.43□□□□□ -0.58
CCDC90B-217ENST00000530253 RTF1Q92541 710 aaKnown RBP11.43□□□□□ -0.58
CCDC90B-217ENST00000530253 CLEC4MQ9H2X3 399 aaPredicted RBP11.43□□□□□ -0.58
CCDC90B-217ENST00000530253 PRKAG2Q9UGJ0 569 aa11.43□□□□□ -0.58
CCDC90B-217ENST00000530253 ZNF831Q5JPB2 1677 aa11.43□□□□□ -0.58
CCDC90B-217ENST00000530253 PALLDQ8WX93 1383 aa11.42□□□□□ -0.58
CCDC90B-217ENST00000530253 ZNF521Q96K83 1311 aa11.42□□□□□ -0.58
CCDC90B-217ENST00000530253 PLSCR1O15162 318 aa11.42□□□□□ -0.58
CCDC90B-217ENST00000530253 DUSP27Q5VZP5 1158 aa11.42□□□□□ -0.58
CCDC90B-217ENST00000530253 GJD3Q8N144 294 aa11.42□□□□□ -0.58
CCDC90B-217ENST00000530253 ZFYVE28Q9HCC9 887 aa11.42□□□□□ -0.58
CCDC90B-217ENST00000530253 ASAP1Q9ULH1 1129 aa11.42□□□□□ -0.58
CCDC90B-217ENST00000530253 TJP1Q07157 1748 aa11.41□□□□□ -0.58
CCDC90B-217ENST00000530253 KRTAP4-8A0A0G2JLE6 195 aa11.41□□□□□ -0.58
CCDC90B-217ENST00000530253 PCDH1Q08174 1060 aa11.41□□□□□ -0.58
CCDC90B-217ENST00000530253 TEFQ10587 303 aa11.41□□□□□ -0.58
CCDC90B-217ENST00000530253 ASIC4Q96FT7 647 aa11.41□□□□□ -0.58
CCDC90B-217ENST00000530253 NRSN2Q9GZP1 204 aa11.41□□□□□ -0.58
CCDC90B-217ENST00000530253 LATS2Q9NRM7 1088 aa11.41□□□□□ -0.58
CCDC90B-217ENST00000530253 FZD6O60353 706 aa11.4□□□□□ -0.58
CCDC90B-217ENST00000530253 FKBP4Q02790 459 aaKnown RBP eCLIP11.4□□□□□ -0.58
CCDC90B-217ENST00000530253 SLC39A6Q13433 755 aa11.4□□□□□ -0.58
CCDC90B-217ENST00000530253 A0A096LPE4 126 aa11.39□□□□□ -0.59
CCDC90B-217ENST00000530253 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.39□□□□□ -0.59
CCDC90B-217ENST00000530253 A0A1W2PPZ6 126 aa11.39□□□□□ -0.59
CCDC90B-217ENST00000530253 TMEM88BA6NKF7 163 aa11.39□□□□□ -0.59
CCDC90B-217ENST00000530253 KCNQ3O43525 872 aa11.39□□□□□ -0.59
CCDC90B-217ENST00000530253 ZNF853P0CG23 659 aa11.39□□□□□ -0.59
CCDC90B-217ENST00000530253 COL5A3P25940 1745 aaPredicted RBP11.39□□□□□ -0.59
CCDC90B-217ENST00000530253 TAF7Q15545 349 aaPredicted RBP11.39□□□□□ -0.59
CCDC90B-217ENST00000530253 CBLL1Q75N03 491 aa11.39□□□□□ -0.59
CCDC90B-217ENST00000530253 NGEFQ8N5V2 710 aa11.39□□□□□ -0.59
CCDC90B-217ENST00000530253 SMARCC1Q92922 1105 aaPredicted RBP11.39□□□□□ -0.59
CCDC90B-217ENST00000530253 PDGFDQ9GZP0 370 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms