RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 ABCD1P33897 745 aa9.38□□□□□ -0.91
CTNND1-219ENST00000528621 LONP1P36776 959 aaKnown RBP9.38□□□□□ -0.91
CTNND1-219ENST00000528621 MAGEA1P43355 309 aa9.38□□□□□ -0.91
CTNND1-219ENST00000528621 RPS8P62241 208 aaKnown RBP9.38□□□□□ -0.91
CTNND1-219ENST00000528621 UBE3CQ15386 1083 aa9.38□□□□□ -0.91
CTNND1-219ENST00000528621 DCUN1D2Q6PH85 259 aa9.38□□□□□ -0.91
CTNND1-219ENST00000528621 GPBP1Q86WP2 473 aa9.38□□□□□ -0.91
CTNND1-219ENST00000528621 P3H4Q92791 437 aa9.38□□□□□ -0.91
CTNND1-219ENST00000528621 DDX17Q92841 729 aaKnown RBP9.38□□□□□ -0.91
CTNND1-219ENST00000528621 ZNF496Q96IT1 587 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-219ENST00000528621 MIS12Q9H081 205 aa9.38□□□□□ -0.91
CTNND1-219ENST00000528621 MAP3K15Q6ZN16 1313 aa9.38□□□□□ -0.91
CTNND1-219ENST00000528621 ADCY10Q96PN6 1610 aa9.38□□□□□ -0.91
CTNND1-219ENST00000528621 ZWINTO95229 277 aa9.38□□□□□ -0.91
CTNND1-219ENST00000528621 POLR2MP0CAP2 368 aa9.38□□□□□ -0.91
CTNND1-219ENST00000528621 CNGA1P29973 690 aa9.38□□□□□ -0.91
CTNND1-219ENST00000528621 MTX1Q13505 466 aa9.38□□□□□ -0.91
CTNND1-219ENST00000528621 MORC3Q14149 939 aa9.38□□□□□ -0.91
CTNND1-219ENST00000528621 GEN1Q17RS7 908 aa9.38□□□□□ -0.91
CTNND1-219ENST00000528621 CMA1P23946 247 aa9.38□□□□□ -0.91
CTNND1-219ENST00000528621 RNASE9P60153 205 aaKnown RBP9.38□□□□□ -0.91
CTNND1-219ENST00000528621 GABPAQ06546 454 aa9.38□□□□□ -0.91
CTNND1-219ENST00000528621 NFE2L3Q9Y4A8 694 aa9.38□□□□□ -0.91
CTNND1-219ENST00000528621 KCNJ18B7U540 433 aa9.38□□□□□ -0.91
CTNND1-219ENST00000528621 CEP104O60308 925 aa9.38□□□□□ -0.91
CTNND1-219ENST00000528621 ATF7P17544 494 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-219ENST00000528621 RBM6P78332 1123 aaKnown RBP9.38□□□□□ -0.91
CTNND1-219ENST00000528621 PABPC4Q13310 644 aaKnown RBP eCLIP9.38□□□□□ -0.91
CTNND1-219ENST00000528621 KCNJ12Q14500 433 aa9.38□□□□□ -0.91
CTNND1-219ENST00000528621 LONRF3Q496Y0 759 aa9.38□□□□□ -0.91
CTNND1-219ENST00000528621 MYSM1Q5VVJ2 828 aa9.38□□□□□ -0.91
CTNND1-219ENST00000528621 MYOCDQ8IZQ8 938 aa9.38□□□□□ -0.91
CTNND1-219ENST00000528621 CPXCR1Q8N123 301 aa9.38□□□□□ -0.91
CTNND1-219ENST00000528621 MYRIPQ8NFW9 859 aa9.38□□□□□ -0.91
CTNND1-219ENST00000528621 RSRC1Q96IZ7 334 aaKnown RBP9.38□□□□□ -0.91
CTNND1-219ENST00000528621 RRAGDQ9NQL2 400 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-219ENST00000528621 PANK4Q9NVE7 773 aa9.38□□□□□ -0.91
CTNND1-219ENST00000528621 MYO1AQ9UBC5 1043 aa9.38□□□□□ -0.91
CTNND1-219ENST00000528621 STAP2Q9UGK3 403 aa9.38□□□□□ -0.91
CTNND1-219ENST00000528621 PRDM15P57071 1507 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-219ENST00000528621 GTPBP6O43824 516 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-219ENST00000528621 ARHGAP24Q8N264 748 aa9.38□□□□□ -0.91
CTNND1-219ENST00000528621 TRIM58Q8NG06 486 aa9.38□□□□□ -0.91
CTNND1-219ENST00000528621 DEPTORQ8TB45 409 aa9.38□□□□□ -0.91
CTNND1-219ENST00000528621 SLAIN2Q9P270 581 aa9.38□□□□□ -0.91
CTNND1-219ENST00000528621 ASIC3Q9UHC3 531 aa9.38□□□□□ -0.91
CTNND1-219ENST00000528621 TET3O43151 1660 aa9.37□□□□□ -0.91
CTNND1-219ENST00000528621 GTF2IP78347 998 aa9.37□□□□□ -0.91
CTNND1-219ENST00000528621 DCAF15Q66K64 600 aa9.37□□□□□ -0.91
CTNND1-219ENST00000528621 NSMFQ6X4W1 530 aa9.37□□□□□ -0.91
CTNND1-219ENST00000528621 CCDC24Q8N4L8 307 aa9.37□□□□□ -0.91
CTNND1-219ENST00000528621 ATG3Q9NT62 314 aa9.37□□□□□ -0.91
CTNND1-219ENST00000528621 PFKFB1P16118 471 aa9.37□□□□□ -0.91
CTNND1-219ENST00000528621 BTDP43251 543 aa9.37□□□□□ -0.91
CTNND1-219ENST00000528621 KMT5BQ4FZB7 885 aa9.37□□□□□ -0.91
CTNND1-219ENST00000528621 MRRFQ96E11 262 aaKnown RBP9.37□□□□□ -0.91
CTNND1-219ENST00000528621 TEKT3Q9BXF9 490 aa9.37□□□□□ -0.91
CTNND1-219ENST00000528621 DDX25Q9UHL0 483 aaKnown RBP9.37□□□□□ -0.91
CTNND1-219ENST00000528621 AMFRQ9UKV5 643 aa9.37□□□□□ -0.91
CTNND1-219ENST00000528621 UGGT1Q9NYU2 1555 aa9.37□□□□□ -0.91
CTNND1-219ENST00000528621 H7C1D1 291 aa9.37□□□□□ -0.91
CTNND1-219ENST00000528621 PRKG1Q13976 671 aa9.37□□□□□ -0.91
CTNND1-219ENST00000528621 MFSD14BQ5SR56 506 aa9.37□□□□□ -0.91
CTNND1-219ENST00000528621 TYW1BQ6NUM6 668 aa9.37□□□□□ -0.91
CTNND1-219ENST00000528621 KRBA2Q6ZNG9 492 aa9.37□□□□□ -0.91
CTNND1-219ENST00000528621 KLHL7Q8IXQ5 586 aa9.37□□□□□ -0.91
CTNND1-219ENST00000528621 PLEKHF1Q96S99 279 aa9.37□□□□□ -0.91
CTNND1-219ENST00000528621 PSTPIP2Q9H939 334 aa9.37□□□□□ -0.91
CTNND1-219ENST00000528621 CDC42BPGQ6DT37 1551 aa9.37□□□□□ -0.91
CTNND1-219ENST00000528621 ERVK-7P63135 1459 aa9.37□□□□□ -0.91
CTNND1-219ENST00000528621 LPXNO60711 386 aa9.37□□□□□ -0.91
CTNND1-219ENST00000528621 PPFIA1Q13136 1202 aa9.37□□□□□ -0.91
CTNND1-219ENST00000528621 BRD3Q15059 726 aa9.37□□□□□ -0.91
CTNND1-219ENST00000528621 PEX26Q7Z412 305 aa9.37□□□□□ -0.91
CTNND1-219ENST00000528621 SMAP1Q8IYB5 467 aaPredicted RBP9.37□□□□□ -0.91
CTNND1-219ENST00000528621 CCDC89Q8N998 374 aa9.37□□□□□ -0.91
CTNND1-219ENST00000528621 TBC1D31Q96DN5 1066 aa9.37□□□□□ -0.91
CTNND1-219ENST00000528621 CARD6Q9BX69 1037 aa9.37□□□□□ -0.91
CTNND1-219ENST00000528621 METTL14Q9HCE5 456 aaKnown RBP9.37□□□□□ -0.91
CTNND1-219ENST00000528621 CDK12Q9NYV4 1490 aaPredicted RBP9.37□□□□□ -0.91
CTNND1-219ENST00000528621 ZCCHC11Q5TAX3 1644 aaKnown RBP9.37□□□□□ -0.91
CTNND1-219ENST00000528621 PPP6R2O75170 966 aa9.37□□□□□ -0.91
CTNND1-219ENST00000528621 STAM2O75886 525 aa9.37□□□□□ -0.91
CTNND1-219ENST00000528621 OR52Z1P0C646 297 aa9.37□□□□□ -0.91
CTNND1-219ENST00000528621 TRAPPC10P48553 1259 aa9.37□□□□□ -0.91
CTNND1-219ENST00000528621 RAD51AP2Q09MP3 1159 aa9.37□□□□□ -0.91
CTNND1-219ENST00000528621 LONRF2Q1L5Z9 754 aa9.37□□□□□ -0.91
CTNND1-219ENST00000528621 RRAGAQ7L523 313 aa9.37□□□□□ -0.91
CTNND1-219ENST00000528621 RABGAP1Q9Y3P9 1069 aa9.37□□□□□ -0.91
CTNND1-219ENST00000528621 MAGI3Q5TCQ9 1506 aa9.36□□□□□ -0.91
CTNND1-219ENST00000528621 hCG_1642624A0A1W2PR95 340 aa9.36□□□□□ -0.91
CTNND1-219ENST00000528621 I3L4J1 428 aa9.36□□□□□ -0.91
CTNND1-219ENST00000528621 RIOK3O14730 519 aaKnown RBP9.36□□□□□ -0.91
CTNND1-219ENST00000528621 FOSP01100 380 aaPredicted RBP9.36□□□□□ -0.91
CTNND1-219ENST00000528621 SCG2P13521 617 aa9.36□□□□□ -0.91
CTNND1-219ENST00000528621 ARHGAP25P42331 645 aa9.36□□□□□ -0.91
CTNND1-219ENST00000528621 TECP42680 631 aa9.36□□□□□ -0.91
CTNND1-219ENST00000528621 GABPB1Q06547 395 aaPredicted RBP9.36□□□□□ -0.91
CTNND1-219ENST00000528621 CHRNDQ07001 517 aa9.36□□□□□ -0.91
CTNND1-219ENST00000528621 PPP1R2P3Q6NXS1 205 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms