RNA–Protein interactions for RNA: ENST00000528611.1

MACF1-228, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-228ENST00000528611 SEPT2Q15019 361 aa7.26□□□□□ -1.25
MACF1-228ENST00000528611 RAB3GAP1Q15042 981 aa7.26□□□□□ -1.25
MACF1-228ENST00000528611 BTNL9Q6UXG8 535 aa7.26□□□□□ -1.25
MACF1-228ENST00000528611 LBX2Q6XYB7 198 aa7.26□□□□□ -1.25
MACF1-228ENST00000528611 Q6ZUG5 572 aa7.26□□□□□ -1.25
MACF1-228ENST00000528611 PRRT2Q7Z6L0 340 aaPredicted RBP7.26□□□□□ -1.25
MACF1-228ENST00000528611 FAM160B2Q86V87 743 aa7.26□□□□□ -1.25
MACF1-228ENST00000528611 SIAH1Q8IUQ4 282 aa7.26□□□□□ -1.25
MACF1-228ENST00000528611 ZNF713Q8N859 430 aaPredicted RBP7.26□□□□□ -1.25
MACF1-228ENST00000528611 CHURC1Q8WUH1 139 aa7.26□□□□□ -1.25
MACF1-228ENST00000528611 ZKSCAN4Q969J2 545 aaPredicted RBP7.26□□□□□ -1.25
MACF1-228ENST00000528611 MARVELD3Q96A59 401 aa7.26□□□□□ -1.25
MACF1-228ENST00000528611 INTS4Q96HW7 963 aaKnown RBP7.26□□□□□ -1.25
MACF1-228ENST00000528611 TMEM47Q9BQJ4 181 aa7.26□□□□□ -1.25
MACF1-228ENST00000528611 LLPHQ9BRT6 129 aaKnown RBP7.26□□□□□ -1.25
MACF1-228ENST00000528611 HOXC10Q9NYD6 342 aa7.26□□□□□ -1.25
MACF1-228ENST00000528611 TMOD4Q9NZQ9 345 aa7.26□□□□□ -1.25
MACF1-228ENST00000528611 CLIP2Q9UDT6 1046 aa7.26□□□□□ -1.25
MACF1-228ENST00000528611 TACC3Q9Y6A5 838 aa7.26□□□□□ -1.25
MACF1-228ENST00000528611 ZHX2Q9Y6X8 837 aa7.26□□□□□ -1.25
MACF1-228ENST00000528611 ATAD5Q96QE3 1844 aa7.25□□□□□ -1.25
MACF1-228ENST00000528611 TRAF5O00463 557 aa7.25□□□□□ -1.25
MACF1-228ENST00000528611 ZBTB43O43298 467 aa7.25□□□□□ -1.25
MACF1-228ENST00000528611 PFKFB2O60825 505 aa7.25□□□□□ -1.25
MACF1-228ENST00000528611 SLC10A3P09131 477 aa7.25□□□□□ -1.25
MACF1-228ENST00000528611 TM4SF4P48230 202 aa7.25□□□□□ -1.25
MACF1-228ENST00000528611 OAZ1P54368 228 aa7.25□□□□□ -1.25
MACF1-228ENST00000528611 AK2P54819 239 aa7.25□□□□□ -1.25
MACF1-228ENST00000528611 SPP2Q13103 211 aa7.25□□□□□ -1.25
MACF1-228ENST00000528611 TOB2Q14106 344 aaPredicted RBP7.25□□□□□ -1.25
MACF1-228ENST00000528611 RRP1BQ14684 758 aaKnown RBP7.25□□□□□ -1.25
MACF1-228ENST00000528611 DEFB115Q30KQ5 88 aa7.25□□□□□ -1.25
MACF1-228ENST00000528611 FAM47AQ5JRC9 791 aa7.25□□□□□ -1.25
MACF1-228ENST00000528611 PRAMEF18Q5VWM3 479 aa7.25□□□□□ -1.25
MACF1-228ENST00000528611 SPRYD7Q5W111 196 aa7.25□□□□□ -1.25
MACF1-228ENST00000528611 APOA5Q6Q788 366 aa7.25□□□□□ -1.25
MACF1-228ENST00000528611 NFXL1Q6ZNB6 911 aa7.25□□□□□ -1.25
MACF1-228ENST00000528611 ZNF654Q8IZM8 581 aa7.25□□□□□ -1.25
MACF1-228ENST00000528611 SAMD3Q8N6K7 520 aa7.25□□□□□ -1.25
MACF1-228ENST00000528611 MB21D1Q8N884 522 aa7.25□□□□□ -1.25
MACF1-228ENST00000528611 FANCBQ8NB91 859 aa7.25□□□□□ -1.25
MACF1-228ENST00000528611 CTCFLQ8NI51 663 aaPredicted RBP7.25□□□□□ -1.25
MACF1-228ENST00000528611 BRF1Q92994 677 aa7.25□□□□□ -1.25
MACF1-228ENST00000528611 WNK4Q96J92 1243 aa7.25□□□□□ -1.25
MACF1-228ENST00000528611 CFHR5Q9BXR6 569 aa7.25□□□□□ -1.25
MACF1-228ENST00000528611 FEM1BQ9UK73 627 aa7.25□□□□□ -1.25
MACF1-228ENST00000528611 PNMA3Q9UL41 463 aa7.25□□□□□ -1.25
MACF1-228ENST00000528611 KIF3AQ9Y496 699 aa7.25□□□□□ -1.25
MACF1-228ENST00000528611 TAF6LQ9Y6J9 622 aa7.25□□□□□ -1.25
MACF1-228ENST00000528611 PALM3A6NDB9 673 aaPredicted RBP7.24□□□□□ -1.25
MACF1-228ENST00000528611 FAM196BA6NMK8 535 aa7.24□□□□□ -1.25
MACF1-228ENST00000528611 USP17L15C9J2P7 530 aa7.24□□□□□ -1.25
MACF1-228ENST00000528611 USP17L13C9JLJ4 530 aa7.24□□□□□ -1.25
MACF1-228ENST00000528611 USP17L11C9JVI0 530 aa7.24□□□□□ -1.25
MACF1-228ENST00000528611 USP17L18D6R9N7 530 aa7.24□□□□□ -1.25
MACF1-228ENST00000528611 USP17L22D6RA61 530 aa7.24□□□□□ -1.25
MACF1-228ENST00000528611 USP17L17D6RBQ6 530 aa7.24□□□□□ -1.25
MACF1-228ENST00000528611 USP17L19D6RCP7 530 aa7.24□□□□□ -1.25
MACF1-228ENST00000528611 USP17L20D6RJB6 530 aa7.24□□□□□ -1.25
MACF1-228ENST00000528611 UBE2Q2LH0YL09 131 aa7.24□□□□□ -1.25
MACF1-228ENST00000528611 IRF6O14896 467 aa7.24□□□□□ -1.25
MACF1-228ENST00000528611 GDF11O95390 407 aa7.24□□□□□ -1.25
MACF1-228ENST00000528611 PARP1P09874 1014 aaKnown RBP7.24□□□□□ -1.25
MACF1-228ENST00000528611 PDHBP11177 359 aa7.24□□□□□ -1.25
MACF1-228ENST00000528611 BMP3P12645 472 aa7.24□□□□□ -1.25
MACF1-228ENST00000528611 IFNAR1P17181 557 aa7.24□□□□□ -1.25
MACF1-228ENST00000528611 PDIA3P30101 505 aaKnown RBP7.24□□□□□ -1.25
MACF1-228ENST00000528611 COPB2P35606 906 aa7.24□□□□□ -1.25
MACF1-228ENST00000528611 SLC1A4P43007 532 aa7.24□□□□□ -1.25
MACF1-228ENST00000528611 ZNF157P51786 506 aaPredicted RBP7.24□□□□□ -1.25
MACF1-228ENST00000528611 HMGN5P82970 282 aaKnown RBP7.24□□□□□ -1.25
MACF1-228ENST00000528611 ZNF543Q08ER8 600 aa7.24□□□□□ -1.25
MACF1-228ENST00000528611 USP17L24Q0WX57 530 aa7.24□□□□□ -1.25
MACF1-228ENST00000528611 GRM4Q14833 912 aa7.24□□□□□ -1.25
MACF1-228ENST00000528611 ANKRD23Q86SG2 305 aa7.24□□□□□ -1.25
MACF1-228ENST00000528611 PRPF38AQ8NAV1 312 aaKnown RBP7.24□□□□□ -1.25
MACF1-228ENST00000528611 WASF1Q92558 559 aa7.24□□□□□ -1.25
MACF1-228ENST00000528611 OPTNQ96CV9 577 aa7.24□□□□□ -1.25
MACF1-228ENST00000528611 MS4A4AQ96JQ5 239 aa7.24□□□□□ -1.25
MACF1-228ENST00000528611 FEZ1Q99689 392 aa7.24□□□□□ -1.25
MACF1-228ENST00000528611 SPZ1Q9BXG8 430 aa7.24□□□□□ -1.25
MACF1-228ENST00000528611 UPF3BQ9BZI7 483 aaKnown RBP7.24□□□□□ -1.25
MACF1-228ENST00000528611 GLT8D2Q9H1C3 349 aa7.24□□□□□ -1.25
MACF1-228ENST00000528611 ZNF408Q9H9D4 720 aa7.24□□□□□ -1.25
MACF1-228ENST00000528611 INCENPQ9NQS7 918 aa7.24□□□□□ -1.25
MACF1-228ENST00000528611 MAP3K20Q9NYL2 800 aaKnown RBP7.24□□□□□ -1.25
MACF1-228ENST00000528611 ADAMTS5Q9UNA0 930 aa7.24□□□□□ -1.25
MACF1-228ENST00000528611 AGTPBP1Q9UPW5 1226 aa7.24□□□□□ -1.25
MACF1-228ENST00000528611 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.24□□□□□ -1.25
MACF1-228ENST00000528611 PHIPQ8WWQ0 1821 aa7.23□□□□□ -1.25
MACF1-228ENST00000528611 OTOFQ9HC10 1997 aa7.23□□□□□ -1.25
MACF1-228ENST00000528611 KLF18A0A0U1RQI7 1052 aa7.23□□□□□ -1.25
MACF1-228ENST00000528611 A0A1W2PRG0 241 aa7.23□□□□□ -1.25
MACF1-228ENST00000528611 SMIM22K7EJ46 135 aa7.23□□□□□ -1.25
MACF1-228ENST00000528611 K7ELQ4 463 aaPredicted RBP7.23□□□□□ -1.25
MACF1-228ENST00000528611 ATP2A1O14983 1001 aa7.23□□□□□ -1.25
MACF1-228ENST00000528611 OSBPP22059 807 aa7.23□□□□□ -1.25
MACF1-228ENST00000528611 ANP32AP39687 249 aaKnown RBP7.23□□□□□ -1.25
MACF1-228ENST00000528611 GCLCP48506 637 aaPredicted RBP7.23□□□□□ -1.25
MACF1-228ENST00000528611 METAP2P50579 478 aaKnown RBP eCLIP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms