RNA–Protein interactions for RNA: ENST00000528608.5

COMMD9-205, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 988 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-205ENST00000528608 PAPPAQ13219 1627 aa10.91□□□□□ -0.66
COMMD9-205ENST00000528608 MAP3K5Q99683 1374 aa10.9□□□□□ -0.66
COMMD9-205ENST00000528608 CPNE3O75131 537 aaKnown RBP10.9□□□□□ -0.66
COMMD9-205ENST00000528608 GRIA4P48058 902 aa10.9□□□□□ -0.66
COMMD9-205ENST00000528608 ORC1Q13415 861 aa10.9□□□□□ -0.66
COMMD9-205ENST00000528608 DCTN1Q14203 1278 aa10.9□□□□□ -0.66
COMMD9-205ENST00000528608 ZNF827Q17R98 1081 aa10.9□□□□□ -0.66
COMMD9-205ENST00000528608 SPRED3Q2MJR0 410 aa10.9□□□□□ -0.66
COMMD9-205ENST00000528608 CCDC146Q8IYE0 955 aa10.9□□□□□ -0.66
COMMD9-205ENST00000528608 SMG8Q8ND04 991 aaKnown RBP10.9□□□□□ -0.66
COMMD9-205ENST00000528608 SMARCC1Q92922 1105 aaPredicted RBP10.9□□□□□ -0.66
COMMD9-205ENST00000528608 FAM129BQ96TA1 746 aa10.9□□□□□ -0.66
COMMD9-205ENST00000528608 PDGFDQ9GZP0 370 aaPredicted RBP10.9□□□□□ -0.66
COMMD9-205ENST00000528608 SUGCTQ9HAC7 445 aa10.9□□□□□ -0.66
COMMD9-205ENST00000528608 MRC1P22897 1456 aa10.89□□□□□ -0.67
COMMD9-205ENST00000528608 MAP4P27816 1152 aaKnown RBP10.89□□□□□ -0.67
COMMD9-205ENST00000528608 GRIK1P39086 918 aa10.89□□□□□ -0.67
COMMD9-205ENST00000528608 SLC39A6Q13433 755 aa10.89□□□□□ -0.67
COMMD9-205ENST00000528608 SLC15A2Q16348 729 aa10.89□□□□□ -0.67
COMMD9-205ENST00000528608 SGO2Q562F6 1265 aa10.89□□□□□ -0.67
COMMD9-205ENST00000528608 EXOSC6Q5RKV6 272 aaKnown RBP10.89□□□□□ -0.67
COMMD9-205ENST00000528608 MCM10Q7L590 875 aa10.89□□□□□ -0.67
COMMD9-205ENST00000528608 PSMG3-AS1Q96PY0 264 aa10.89□□□□□ -0.67
COMMD9-205ENST00000528608 CITED4Q96RK1 184 aa10.89□□□□□ -0.67
COMMD9-205ENST00000528608 EHD4Q9H223 541 aa10.89□□□□□ -0.67
COMMD9-205ENST00000528608 DLG5Q8TDM6 1919 aa10.89□□□□□ -0.67
COMMD9-205ENST00000528608 DLGAP3O95886 979 aa10.88□□□□□ -0.67
COMMD9-205ENST00000528608 ITPK1Q13572 414 aa10.88□□□□□ -0.67
COMMD9-205ENST00000528608 WDR43Q15061 677 aaKnown RBP eCLIP10.88□□□□□ -0.67
COMMD9-205ENST00000528608 NPHS2Q9NP85 383 aa10.88□□□□□ -0.67
COMMD9-205ENST00000528608 STK32BQ9NY57 414 aa10.88□□□□□ -0.67
COMMD9-205ENST00000528608 TAF1LQ8IZX4 1826 aa10.88□□□□□ -0.67
COMMD9-205ENST00000528608 CEMIPQ8WUJ3 1361 aa10.88□□□□□ -0.67
COMMD9-205ENST00000528608 TIAF1O95411 115 aa10.87□□□□□ -0.67
COMMD9-205ENST00000528608 NFE2L2Q16236 605 aa10.87□□□□□ -0.67
COMMD9-205ENST00000528608 KIAA0319Q5VV43 1072 aa10.87□□□□□ -0.67
COMMD9-205ENST00000528608 SMIM5Q71RC9 77 aa10.87□□□□□ -0.67
COMMD9-205ENST00000528608 LINC00116Q8NCU8 138 aa10.87□□□□□ -0.67
COMMD9-205ENST00000528608 SHKBP1Q8TBC3 707 aa10.87□□□□□ -0.67
COMMD9-205ENST00000528608 SIPA1L3O60292 1781 aaPredicted RBP10.87□□□□□ -0.67
COMMD9-205ENST00000528608 KCNQ3O43525 872 aa10.86□□□□□ -0.67
COMMD9-205ENST00000528608 ZNF423Q2M1K9 1284 aa10.86□□□□□ -0.67
COMMD9-205ENST00000528608 AMIGO3Q86WK7 504 aa10.86□□□□□ -0.67
COMMD9-205ENST00000528608 PNISRQ8TF01 805 aaKnown RBP10.86□□□□□ -0.67
COMMD9-205ENST00000528608 THUMPD2Q9BTF0 503 aaKnown RBP10.86□□□□□ -0.67
COMMD9-205ENST00000528608 KRTAP4-8Q9BYQ9 185 aa10.86□□□□□ -0.67
COMMD9-205ENST00000528608 PNNQ9H307 717 aaKnown RBP10.86□□□□□ -0.67
COMMD9-205ENST00000528608 RRP7AQ9Y3A4 280 aaKnown RBP10.86□□□□□ -0.67
COMMD9-205ENST00000528608 TUBGCP6Q96RT7 1819 aa10.86□□□□□ -0.67
COMMD9-205ENST00000528608 C5P01031 1676 aa10.85□□□□□ -0.67
COMMD9-205ENST00000528608 MAPK8IP3Q9UPT6 1336 aa10.85□□□□□ -0.67
COMMD9-205ENST00000528608 GPR182O15218 404 aa10.85□□□□□ -0.67
COMMD9-205ENST00000528608 HTATSF1O43719 755 aaKnown RBP10.85□□□□□ -0.67
COMMD9-205ENST00000528608 MED26O95402 600 aa10.85□□□□□ -0.67
COMMD9-205ENST00000528608 DRD2P14416 443 aa10.85□□□□□ -0.67
COMMD9-205ENST00000528608 TMPOP42166 694 aaKnown RBP10.85□□□□□ -0.67
COMMD9-205ENST00000528608 USP11P51784 963 aa10.85□□□□□ -0.67
COMMD9-205ENST00000528608 RIPK4P57078 832 aa10.85□□□□□ -0.67
COMMD9-205ENST00000528608 TEFQ10587 303 aa10.85□□□□□ -0.67
COMMD9-205ENST00000528608 INTS5Q6P9B9 1019 aaKnown RBP10.85□□□□□ -0.67
COMMD9-205ENST00000528608 RUNDC1Q96C34 613 aa10.85□□□□□ -0.67
COMMD9-205ENST00000528608 MFSD14AQ96MC6 490 aa10.85□□□□□ -0.67
COMMD9-205ENST00000528608 NRSN2Q9GZP1 204 aa10.85□□□□□ -0.67
COMMD9-205ENST00000528608 MRS2Q9HD23 443 aa10.85□□□□□ -0.67
COMMD9-205ENST00000528608 CASZ1Q86V15 1759 aa10.85□□□□□ -0.67
COMMD9-205ENST00000528608 KCPQ6ZWJ8 1503 aa10.84□□□□□ -0.67
COMMD9-205ENST00000528608 KIAA1324LA8MWY0 1029 aaPredicted RBP10.84□□□□□ -0.67
COMMD9-205ENST00000528608 CYP11A1P05108 521 aa10.84□□□□□ -0.67
COMMD9-205ENST00000528608 NEFMP07197 916 aa10.84□□□□□ -0.67
COMMD9-205ENST00000528608 MAOBP27338 520 aa10.84□□□□□ -0.67
COMMD9-205ENST00000528608 POU4F3Q15319 338 aa10.84□□□□□ -0.67
COMMD9-205ENST00000528608 HP1BP3Q5SSJ5 553 aaPredicted RBP10.84□□□□□ -0.67
COMMD9-205ENST00000528608 RTF1Q92541 710 aaKnown RBP10.84□□□□□ -0.67
COMMD9-205ENST00000528608 NIF3L1Q9GZT8 377 aa10.84□□□□□ -0.67
COMMD9-205ENST00000528608 MIS18AQ9NYP9 233 aa10.84□□□□□ -0.67
COMMD9-205ENST00000528608 C4BP0C0L5 1744 aa10.84□□□□□ -0.67
COMMD9-205ENST00000528608 PNPLA7Q6ZV29 1317 aa10.84□□□□□ -0.67
COMMD9-205ENST00000528608 PRR19A6NJB7 356 aa10.83□□□□□ -0.68
COMMD9-205ENST00000528608 WDR64B1ANS9 1081 aa10.83□□□□□ -0.68
COMMD9-205ENST00000528608 EIF1AYO14602 144 aaKnown RBP10.83□□□□□ -0.68
COMMD9-205ENST00000528608 ZNF790Q6PG37 636 aa10.83□□□□□ -0.68
COMMD9-205ENST00000528608 COL23A1Q86Y22 540 aaPredicted RBP10.83□□□□□ -0.68
COMMD9-205ENST00000528608 DNAJC10Q8IXB1 793 aa10.83□□□□□ -0.68
COMMD9-205ENST00000528608 GIMAP7Q8NHV1 300 aa10.83□□□□□ -0.68
COMMD9-205ENST00000528608 DNAJC25Q9H1X3 360 aa10.83□□□□□ -0.68
COMMD9-205ENST00000528608 ZNF576Q9H609 170 aa10.83□□□□□ -0.68
COMMD9-205ENST00000528608 TFCP2L1Q9NZI6 479 aa10.83□□□□□ -0.68
COMMD9-205ENST00000528608 TJP1Q07157 1748 aa10.83□□□□□ -0.68
COMMD9-205ENST00000528608 MYH14Q7Z406 1995 aaKnown RBP10.83□□□□□ -0.68
COMMD9-205ENST00000528608 ZNF831Q5JPB2 1677 aa10.82□□□□□ -0.68
COMMD9-205ENST00000528608 FAM95CA0A1B0GW59 222 aa10.82□□□□□ -0.68
COMMD9-205ENST00000528608 BTBD11A6QL63 1104 aa10.82□□□□□ -0.68
COMMD9-205ENST00000528608 APAF1O14727 1248 aa10.82□□□□□ -0.68
COMMD9-205ENST00000528608 GADD45BO75293 160 aaPredicted RBP10.82□□□□□ -0.68
COMMD9-205ENST00000528608 ZBTB7AO95365 584 aa10.82□□□□□ -0.68
COMMD9-205ENST00000528608 SOX4Q06945 474 aaPredicted RBP10.82□□□□□ -0.68
COMMD9-205ENST00000528608 NFKBIBQ15653 356 aa10.82□□□□□ -0.68
COMMD9-205ENST00000528608 PAOXQ6QHF9 649 aa10.82□□□□□ -0.68
COMMD9-205ENST00000528608 FBXL6Q8N531 539 aa10.82□□□□□ -0.68
COMMD9-205ENST00000528608 C2CD4AQ8NCU7 369 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms