RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 ABRAQ8N0Z2 381 aa11.41□□□□□ -0.58
CHD7-208ENST00000528280 ANKLE1Q8NAG6 615 aa11.41□□□□□ -0.58
CHD7-208ENST00000528280 NEDD1Q8NHV4 660 aa11.41□□□□□ -0.58
CHD7-208ENST00000528280 RILPL2Q969X0 211 aa11.41□□□□□ -0.58
CHD7-208ENST00000528280 SHISA4Q96DD7 197 aa11.41□□□□□ -0.58
CHD7-208ENST00000528280 SEC62Q99442 399 aaKnown RBP11.41□□□□□ -0.58
CHD7-208ENST00000528280 SPATC1LQ9H0A9 340 aa11.41□□□□□ -0.58
CHD7-208ENST00000528280 PORCNQ9H237 461 aa11.41□□□□□ -0.58
CHD7-208ENST00000528280 PAK6Q9NQU5 681 aaPredicted RBP11.41□□□□□ -0.58
CHD7-208ENST00000528280 BTBD7Q9P203 1132 aa11.41□□□□□ -0.58
CHD7-208ENST00000528280 CLIP2Q9UDT6 1046 aa11.41□□□□□ -0.58
CHD7-208ENST00000528280 ADAMTS5Q9UNA0 930 aa11.41□□□□□ -0.58
CHD7-208ENST00000528280 BAZ2AQ9UIF9 1905 aaKnown RBP11.41□□□□□ -0.58
CHD7-208ENST00000528280 F5H6K3 240 aa11.4□□□□□ -0.58
CHD7-208ENST00000528280 RAD21O60216 631 aa11.4□□□□□ -0.58
CHD7-208ENST00000528280 HOXC6P09630 235 aa11.4□□□□□ -0.58
CHD7-208ENST00000528280 FDX1P10109 184 aa11.4□□□□□ -0.58
CHD7-208ENST00000528280 PCP11498 1178 aaKnown RBP11.4□□□□□ -0.58
CHD7-208ENST00000528280 TFAP4Q01664 338 aa11.4□□□□□ -0.58
CHD7-208ENST00000528280 KLRC3Q07444 240 aa11.4□□□□□ -0.58
CHD7-208ENST00000528280 POTEEQ6S8J3 1075 aa11.4□□□□□ -0.58
CHD7-208ENST00000528280 DPP9Q86TI2 863 aa11.4□□□□□ -0.58
CHD7-208ENST00000528280 PLEKHM2Q8IWE5 1019 aa11.4□□□□□ -0.58
CHD7-208ENST00000528280 SPICE1Q8N0Z3 855 aa11.4□□□□□ -0.58
CHD7-208ENST00000528280 PRPF38AQ8NAV1 312 aaKnown RBP11.4□□□□□ -0.58
CHD7-208ENST00000528280 DEFB118Q96PH6 123 aa11.4□□□□□ -0.58
CHD7-208ENST00000528280 APBA2Q99767 749 aa11.4□□□□□ -0.58
CHD7-208ENST00000528280 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.4□□□□□ -0.58
CHD7-208ENST00000528280 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.4□□□□□ -0.58
CHD7-208ENST00000528280 EPB41L4AQ9HCS5 686 aaPredicted RBP11.4□□□□□ -0.58
CHD7-208ENST00000528280 MTMR4Q9NYA4 1195 aa11.4□□□□□ -0.58
CHD7-208ENST00000528280 ANAPC4Q9UJX5 808 aa11.4□□□□□ -0.58
CHD7-208ENST00000528280 CTDP1Q9Y5B0 961 aaPredicted RBP11.4□□□□□ -0.58
CHD7-208ENST00000528280 ALPK3Q96L96 1907 aa11.4□□□□□ -0.58
CHD7-208ENST00000528280 SMIM22K7EJ46 135 aa11.39□□□□□ -0.59
CHD7-208ENST00000528280 FCER1AP12319 257 aa11.39□□□□□ -0.59
CHD7-208ENST00000528280 GRB14Q14449 540 aa11.39□□□□□ -0.59
CHD7-208ENST00000528280 PLS1Q14651 629 aa11.39□□□□□ -0.59
CHD7-208ENST00000528280 DOCK3Q8IZD9 2030 aa11.39□□□□□ -0.59
CHD7-208ENST00000528280 STK11IPQ8N1F8 1099 aa11.39□□□□□ -0.59
CHD7-208ENST00000528280 DEFB123Q8N688 67 aa11.39□□□□□ -0.59
CHD7-208ENST00000528280 MOV10L1Q9BXT6 1211 aaKnown RBP11.39□□□□□ -0.59
CHD7-208ENST00000528280 CRISPLD2Q9H0B8 497 aa11.39□□□□□ -0.59
CHD7-208ENST00000528280 FEM1BQ9UK73 627 aa11.39□□□□□ -0.59
CHD7-208ENST00000528280 MYH8P13535 1937 aa11.39□□□□□ -0.59
CHD7-208ENST00000528280 IGKV6D-41A0A0C4DH26 115 aa11.38□□□□□ -0.59
CHD7-208ENST00000528280 TSPY2A6NKD2 308 aa11.38□□□□□ -0.59
CHD7-208ENST00000528280 VWA5AO00534 786 aa11.38□□□□□ -0.59
CHD7-208ENST00000528280 MSCO60682 206 aa11.38□□□□□ -0.59
CHD7-208ENST00000528280 ZBED4O75132 1171 aa11.38□□□□□ -0.59
CHD7-208ENST00000528280 SDSP20132 328 aa11.38□□□□□ -0.59
CHD7-208ENST00000528280 STAT3P40763 770 aa11.38□□□□□ -0.59
CHD7-208ENST00000528280 KIAA1755Q5JYT7 1200 aa11.38□□□□□ -0.59
CHD7-208ENST00000528280 MAP3K21Q5TCX8 1036 aa11.38□□□□□ -0.59
CHD7-208ENST00000528280 NECAB2Q7Z6G3 386 aa11.38□□□□□ -0.59
CHD7-208ENST00000528280 NCAPG2Q86XI2 1143 aa11.38□□□□□ -0.59
CHD7-208ENST00000528280 GMCL1P1Q8NEA9 526 aa11.38□□□□□ -0.59
CHD7-208ENST00000528280 CHURC1Q8WUH1 139 aa11.38□□□□□ -0.59
CHD7-208ENST00000528280 TRIB2Q92519 343 aa11.38□□□□□ -0.59
CHD7-208ENST00000528280 PRDM6Q9NQX0 595 aa11.38□□□□□ -0.59
CHD7-208ENST00000528280 PPP1R9AQ9ULJ8 1098 aa11.38□□□□□ -0.59
CHD7-208ENST00000528280 ORC4O43929 436 aa11.37□□□□□ -0.59
CHD7-208ENST00000528280 PEX10O60683 326 aa11.37□□□□□ -0.59
CHD7-208ENST00000528280 PRDM1O75626 825 aa11.37□□□□□ -0.59
CHD7-208ENST00000528280 FARP2O94887 1054 aaPredicted RBP11.37□□□□□ -0.59
CHD7-208ENST00000528280 FGAP02671 866 aa11.37□□□□□ -0.59
CHD7-208ENST00000528280 FGRP09769 529 aa11.37□□□□□ -0.59
CHD7-208ENST00000528280 HSPD1P10809 573 aaKnown RBP11.37□□□□□ -0.59
CHD7-208ENST00000528280 PRKAR2AP13861 404 aaKnown RBP11.37□□□□□ -0.59
CHD7-208ENST00000528280 ERCC3P19447 782 aa11.37□□□□□ -0.59
CHD7-208ENST00000528280 CACNB2Q08289 660 aaPredicted RBP11.37□□□□□ -0.59
CHD7-208ENST00000528280 FAM83BQ5T0W9 1011 aa11.37□□□□□ -0.59
CHD7-208ENST00000528280 OLFML2BQ68BL8 750 aa11.37□□□□□ -0.59
CHD7-208ENST00000528280 CCDC129Q6ZRS4 1044 aa11.37□□□□□ -0.59
CHD7-208ENST00000528280 RIOX2Q8IUF8 465 aa11.37□□□□□ -0.59
CHD7-208ENST00000528280 CLEC10AQ8IUN9 316 aa11.37□□□□□ -0.59
CHD7-208ENST00000528280 ATG4CQ96DT6 458 aa11.37□□□□□ -0.59
CHD7-208ENST00000528280 CEP95Q96GE4 821 aa11.37□□□□□ -0.59
CHD7-208ENST00000528280 SLF1Q9BQI6 1058 aa11.37□□□□□ -0.59
CHD7-208ENST00000528280 RNF41Q9H4P4 317 aaPredicted RBP11.37□□□□□ -0.59
CHD7-208ENST00000528280 DIAPH3Q9NSV4 1193 aa11.37□□□□□ -0.59
CHD7-208ENST00000528280 MTMR10Q9NXD2 777 aa11.37□□□□□ -0.59
CHD7-208ENST00000528280 DIS3Q9Y2L1 958 aaKnown RBP11.37□□□□□ -0.59
CHD7-208ENST00000528280 ZMYM6O95789 1325 aa11.36□□□□□ -0.59
CHD7-208ENST00000528280 ZNF213O14771 459 aa11.36□□□□□ -0.59
CHD7-208ENST00000528280 ATP2A1O14983 1001 aa11.36□□□□□ -0.59
CHD7-208ENST00000528280 RANBP6O60518 1105 aaKnown RBP11.36□□□□□ -0.59
CHD7-208ENST00000528280 PLA2G6O60733 806 aa11.36□□□□□ -0.59
CHD7-208ENST00000528280 NDUFB10O96000 172 aa11.36□□□□□ -0.59
CHD7-208ENST00000528280 BMP3P12645 472 aa11.36□□□□□ -0.59
CHD7-208ENST00000528280 ADORA2AP29274 412 aa11.36□□□□□ -0.59
CHD7-208ENST00000528280 OAZ1P54368 228 aa11.36□□□□□ -0.59
CHD7-208ENST00000528280 NMIQ13287 307 aaPredicted RBP11.36□□□□□ -0.59
CHD7-208ENST00000528280 KCTD2Q14681 263 aa11.36□□□□□ -0.59
CHD7-208ENST00000528280 TMEM132BQ14DG7 1078 aa11.36□□□□□ -0.59
CHD7-208ENST00000528280 CCDC178Q5BJE1 867 aa11.36□□□□□ -0.59
CHD7-208ENST00000528280 FAM47AQ5JRC9 791 aa11.36□□□□□ -0.59
CHD7-208ENST00000528280 SLFN13Q68D06 897 aa11.36□□□□□ -0.59
CHD7-208ENST00000528280 SAMD1Q6SPF0 538 aaPredicted RBP11.36□□□□□ -0.59
CHD7-208ENST00000528280 FAM160B2Q86V87 743 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms