RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 IPO7O95373 1038 aaKnown RBP16.46■□□□□ 0.23
CAPN1-214ENST00000528165 GNGT1P63211 74 aa16.46■□□□□ 0.23
CAPN1-214ENST00000528165 JADE2Q9NQC1 790 aa16.46■□□□□ 0.23
CAPN1-214ENST00000528165 BCL9LQ86UU0 1499 aa16.46■□□□□ 0.23
CAPN1-214ENST00000528165 RGPD5Q99666 1765 aa16.46■□□□□ 0.23
CAPN1-214ENST00000528165 XDHP47989 1333 aa16.46■□□□□ 0.22
CAPN1-214ENST00000528165 CSB-PGBD3P0DP91 1061 aa16.46■□□□□ 0.22
CAPN1-214ENST00000528165 INPP5BP32019 993 aa16.46■□□□□ 0.22
CAPN1-214ENST00000528165 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.46■□□□□ 0.22
CAPN1-214ENST00000528165 FANCBQ8NB91 859 aa16.46■□□□□ 0.22
CAPN1-214ENST00000528165 DNAJC7Q99615 494 aa16.46■□□□□ 0.22
CAPN1-214ENST00000528165 RABEP2Q9H5N1 569 aa16.46■□□□□ 0.22
CAPN1-214ENST00000528165 EPB41L4AQ9HCS5 686 aaPredicted RBP16.46■□□□□ 0.22
CAPN1-214ENST00000528165 PARP4Q9UKK3 1724 aaKnown RBP16.45■□□□□ 0.22
CAPN1-214ENST00000528165 GOLGA8KD6RF30 607 aa16.45■□□□□ 0.22
CAPN1-214ENST00000528165 KRT2P35908 639 aa16.45■□□□□ 0.22
CAPN1-214ENST00000528165 SND1Q7KZF4 910 aaKnown RBP eCLIP16.45■□□□□ 0.22
CAPN1-214ENST00000528165 AENQ8WTP8 325 aaKnown RBP16.45■□□□□ 0.22
CAPN1-214ENST00000528165 EHD4Q9H223 541 aa16.45■□□□□ 0.22
CAPN1-214ENST00000528165 ZNF185O15231 689 aa16.45■□□□□ 0.22
CAPN1-214ENST00000528165 HNRNPH1P31943 449 aaKnown RBP16.45■□□□□ 0.22
CAPN1-214ENST00000528165 C2orf54Q08AI8 447 aa16.45■□□□□ 0.22
CAPN1-214ENST00000528165 AMOTL1Q8IY63 956 aa16.45■□□□□ 0.22
CAPN1-214ENST00000528165 TMTC2Q8N394 836 aa16.45■□□□□ 0.22
CAPN1-214ENST00000528165 ZNF512BQ96KM6 892 aaPredicted RBP16.45■□□□□ 0.22
CAPN1-214ENST00000528165 VPS54Q9P1Q0 977 aa16.45■□□□□ 0.22
CAPN1-214ENST00000528165 ANO9A1A5B4 782 aa16.44■□□□□ 0.22
CAPN1-214ENST00000528165 IDEP14735 1019 aa16.44■□□□□ 0.22
CAPN1-214ENST00000528165 CYLC1P35663 651 aaPredicted RBP16.44■□□□□ 0.22
CAPN1-214ENST00000528165 FBXW10Q5XX13 1052 aa16.44■□□□□ 0.22
CAPN1-214ENST00000528165 ZNF662Q6ZS27 426 aa16.44■□□□□ 0.22
CAPN1-214ENST00000528165 MB21D1Q8N884 522 aa16.44■□□□□ 0.22
CAPN1-214ENST00000528165 NUP188Q5SRE5 1749 aa16.44■□□□□ 0.22
CAPN1-214ENST00000528165 LRP6O75581 1613 aa16.44■□□□□ 0.22
CAPN1-214ENST00000528165 TCRBV5S4A2TA0A5A2 114 aa16.44■□□□□ 0.22
CAPN1-214ENST00000528165 PDE2AO00408 941 aaPredicted RBP16.44■□□□□ 0.22
CAPN1-214ENST00000528165 OPA1O60313 960 aa16.44■□□□□ 0.22
CAPN1-214ENST00000528165 ZNF174Q15697 407 aa16.44■□□□□ 0.22
CAPN1-214ENST00000528165 ZNF658Q5TYW1 1059 aaPredicted RBP16.44■□□□□ 0.22
CAPN1-214ENST00000528165 LDHAL6AQ6ZMR3 332 aa16.44■□□□□ 0.22
CAPN1-214ENST00000528165 ANKRD18AQ8IVF6 992 aa16.44■□□□□ 0.22
CAPN1-214ENST00000528165 ZNF654Q8IZM8 581 aa16.44■□□□□ 0.22
CAPN1-214ENST00000528165 RMND1Q9NWS8 449 aa16.44■□□□□ 0.22
CAPN1-214ENST00000528165 MAPK8IP1Q9UQF2 711 aa16.44■□□□□ 0.22
CAPN1-214ENST00000528165 TACC3Q9Y6A5 838 aa16.44■□□□□ 0.22
CAPN1-214ENST00000528165 GRIN2DO15399 1336 aa16.43■□□□□ 0.22
CAPN1-214ENST00000528165 H7C1D1 291 aa16.43■□□□□ 0.22
CAPN1-214ENST00000528165 GTPBP6O43824 516 aaPredicted RBP16.43■□□□□ 0.22
CAPN1-214ENST00000528165 MBD4O95243 580 aa16.43■□□□□ 0.22
CAPN1-214ENST00000528165 PARP1P09874 1014 aaKnown RBP16.43■□□□□ 0.22
CAPN1-214ENST00000528165 EARS2Q5JPH6 523 aaKnown RBP16.43■□□□□ 0.22
CAPN1-214ENST00000528165 WDR59Q6PJI9 974 aa16.43■□□□□ 0.22
CAPN1-214ENST00000528165 FAM89AQ96GI7 184 aa16.43■□□□□ 0.22
CAPN1-214ENST00000528165 RNF26Q9BY78 433 aaPredicted RBP16.43■□□□□ 0.22
CAPN1-214ENST00000528165 CAPN11Q9UMQ6 739 aa16.43■□□□□ 0.22
CAPN1-214ENST00000528165 RIC1Q4ADV7 1423 aa16.43■□□□□ 0.22
CAPN1-214ENST00000528165 PKD1L3Q7Z443 1732 aa16.43■□□□□ 0.22
CAPN1-214ENST00000528165 RUFY1Q96T51 708 aa16.43■□□□□ 0.22
CAPN1-214ENST00000528165 HINFPQ9BQA5 517 aa16.43■□□□□ 0.22
CAPN1-214ENST00000528165 ZNHIT6Q9NWK9 470 aaKnown RBP16.43■□□□□ 0.22
CAPN1-214ENST00000528165 A0A1W2PQC6 194 aa16.42■□□□□ 0.22
CAPN1-214ENST00000528165 LGALS16A8MUM7 142 aa16.42■□□□□ 0.22
CAPN1-214ENST00000528165 RCAN1P53805 252 aa16.42■□□□□ 0.22
CAPN1-214ENST00000528165 TTC19Q6DKK2 380 aaPredicted RBP16.42■□□□□ 0.22
CAPN1-214ENST00000528165 PYM1Q9BRP8 204 aaKnown RBP16.42■□□□□ 0.22
CAPN1-214ENST00000528165 ISCA1Q9BUE6 129 aa16.42■□□□□ 0.22
CAPN1-214ENST00000528165 LACRTQ9GZZ8 138 aa16.42■□□□□ 0.22
CAPN1-214ENST00000528165 CNNM1Q9NRU3 951 aa16.42■□□□□ 0.22
CAPN1-214ENST00000528165 RIPOR2Q9Y4F9 1068 aa16.42■□□□□ 0.22
CAPN1-214ENST00000528165 AKAP11Q9UKA4 1901 aa16.42■□□□□ 0.22
CAPN1-214ENST00000528165 TDO2P48775 406 aa16.42■□□□□ 0.22
CAPN1-214ENST00000528165 PAXIP1Q6ZW49 1069 aaPredicted RBP16.42■□□□□ 0.22
CAPN1-214ENST00000528165 SAMM50Q9Y512 469 aa16.42■□□□□ 0.22
CAPN1-214ENST00000528165 MACROD2A1Z1Q3 448 aa16.41■□□□□ 0.22
CAPN1-214ENST00000528165 A6NNZ2 444 aa16.41■□□□□ 0.22
CAPN1-214ENST00000528165 GSCP56915 257 aaPredicted RBP16.41■□□□□ 0.22
CAPN1-214ENST00000528165 SETQ01105 290 aaPredicted RBP16.41■□□□□ 0.22
CAPN1-214ENST00000528165 TUBB8Q3ZCM7 444 aa16.41■□□□□ 0.22
CAPN1-214ENST00000528165 TTC38Q5R3I4 469 aa16.41■□□□□ 0.22
CAPN1-214ENST00000528165 TEX2Q8IWB9 1127 aa16.41■□□□□ 0.22
CAPN1-214ENST00000528165 STAG1Q8WVM7 1258 aa16.41■□□□□ 0.22
CAPN1-214ENST00000528165 SH3GL2Q99962 352 aa16.41■□□□□ 0.22
CAPN1-214ENST00000528165 UBAC1Q9BSL1 405 aa16.41■□□□□ 0.22
CAPN1-214ENST00000528165 PHF20Q9BVI0 1012 aa16.41■□□□□ 0.22
CAPN1-214ENST00000528165 ARMT1Q9H993 441 aa16.41■□□□□ 0.22
CAPN1-214ENST00000528165 WNT7AO00755 349 aa16.41■□□□□ 0.22
CAPN1-214ENST00000528165 NDUFAB1O14561 156 aa16.41■□□□□ 0.22
CAPN1-214ENST00000528165 RPN1P04843 607 aaKnown RBP16.41■□□□□ 0.22
CAPN1-214ENST00000528165 CSF1RP07333 972 aa16.41■□□□□ 0.22
CAPN1-214ENST00000528165 MAP2K2P36507 400 aa16.41■□□□□ 0.22
CAPN1-214ENST00000528165 PRCPP42785 496 aa16.41■□□□□ 0.22
CAPN1-214ENST00000528165 PTGDRQ13258 359 aa16.41■□□□□ 0.22
CAPN1-214ENST00000528165 TCIRG1Q13488 830 aa16.41■□□□□ 0.22
CAPN1-214ENST00000528165 PDXDC2PQ6P474 469 aa16.41■□□□□ 0.22
CAPN1-214ENST00000528165 KCNV1Q6PIU1 500 aa16.41■□□□□ 0.22
CAPN1-214ENST00000528165 B4GALNT4Q76KP1 1039 aa16.41■□□□□ 0.22
CAPN1-214ENST00000528165 KRT28Q7Z3Y7 464 aa16.41■□□□□ 0.22
CAPN1-214ENST00000528165 FNBP4Q8N3X1 1017 aaPredicted RBP16.41■□□□□ 0.22
CAPN1-214ENST00000528165 RRP36Q96EU6 259 aaKnown RBP16.41■□□□□ 0.22
CAPN1-214ENST00000528165 NACAP1Q9BZK3 213 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms