RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 ZNF654Q8IZM8 581 aa8.9□□□□□ -0.98
COPB1-203ENST00000525214 PDZD8Q8NEN9 1154 aa8.9□□□□□ -0.98
COPB1-203ENST00000525214 MYLIPQ8WY64 445 aa8.9□□□□□ -0.98
COPB1-203ENST00000525214 TCTN2Q96GX1 697 aa8.9□□□□□ -0.98
COPB1-203ENST00000525214 G6PC3Q9BUM1 346 aa8.9□□□□□ -0.98
COPB1-203ENST00000525214 ASCC2Q9H1I8 757 aaPredicted RBP8.9□□□□□ -0.98
COPB1-203ENST00000525214 MINPP1Q9UNW1 487 aa8.9□□□□□ -0.98
COPB1-203ENST00000525214 FAM86C2PA6NEL3 165 aa8.89□□□□□ -0.99
COPB1-203ENST00000525214 IMPDH2P12268 514 aa8.89□□□□□ -0.99
COPB1-203ENST00000525214 TIGD5Q53EQ6 642 aa8.89□□□□□ -0.99
COPB1-203ENST00000525214 INTS3Q68E01 1043 aaKnown RBP8.89□□□□□ -0.99
COPB1-203ENST00000525214 FERD3LQ96RJ6 166 aa8.89□□□□□ -0.99
COPB1-203ENST00000525214 C19orf44Q9H6X5 657 aa8.89□□□□□ -0.99
COPB1-203ENST00000525214 SIGLEC6O43699 453 aa8.88□□□□□ -0.99
COPB1-203ENST00000525214 C9orf131Q5VYM1 1079 aa8.88□□□□□ -0.99
COPB1-203ENST00000525214 NT5DC4Q86YG4 428 aa8.88□□□□□ -0.99
COPB1-203ENST00000525214 TAB3Q8N5C8 712 aaPredicted RBP8.88□□□□□ -0.99
COPB1-203ENST00000525214 ZNF655Q8N720 491 aaPredicted RBP8.88□□□□□ -0.99
COPB1-203ENST00000525214 RBBP8NLQ8NC74 664 aaPredicted RBP8.88□□□□□ -0.99
COPB1-203ENST00000525214 LINC01599Q8WXQ3 324 aa8.88□□□□□ -0.99
COPB1-203ENST00000525214 FOXP3Q9BZS1 431 aa8.88□□□□□ -0.99
COPB1-203ENST00000525214 MKRN2Q9H000 416 aaKnown RBP8.88□□□□□ -0.99
COPB1-203ENST00000525214 GINM1Q9NU53 330 aa8.88□□□□□ -0.99
COPB1-203ENST00000525214 C9IYK1 514 aa8.87□□□□□ -0.99
COPB1-203ENST00000525214 ZNF124Q15973 351 aa8.87□□□□□ -0.99
COPB1-203ENST00000525214 BBS9Q3SYG4 887 aa8.87□□□□□ -0.99
COPB1-203ENST00000525214 MPZL3Q6UWV2 235 aa8.87□□□□□ -0.99
COPB1-203ENST00000525214 RNF111Q6ZNA4 994 aa8.87□□□□□ -0.99
COPB1-203ENST00000525214 RUFY4Q6ZNE9 571 aa8.87□□□□□ -0.99
COPB1-203ENST00000525214 RNF32Q9H0A6 362 aa8.87□□□□□ -0.99
COPB1-203ENST00000525214 SUCOQ9UBS9 1254 aaKnown RBP8.87□□□□□ -0.99
COPB1-203ENST00000525214 TMEM82A0PJX8 343 aa8.86□□□□□ -0.99
COPB1-203ENST00000525214 SHOXO15266 292 aa8.86□□□□□ -0.99
COPB1-203ENST00000525214 NR0B2Q15466 257 aa8.86□□□□□ -0.99
COPB1-203ENST00000525214 ZYXQ15942 572 aaKnown RBP8.86□□□□□ -0.99
COPB1-203ENST00000525214 CCDC81Q6ZN84 652 aa8.86□□□□□ -0.99
COPB1-203ENST00000525214 PPFIBP1Q86W92 1011 aa8.86□□□□□ -0.99
COPB1-203ENST00000525214 LSRQ86X29 649 aaPredicted RBP8.86□□□□□ -0.99
COPB1-203ENST00000525214 DHX38Q92620 1227 aaKnown RBP8.86□□□□□ -0.99
COPB1-203ENST00000525214 TM9SF2Q99805 663 aa8.86□□□□□ -0.99
COPB1-203ENST00000525214 TCFL5Q9UL49 500 aa8.86□□□□□ -0.99
COPB1-203ENST00000525214 AUHQ13825 339 aaKnown RBP8.85□□□□□ -0.99
COPB1-203ENST00000525214 FBXW10Q5XX13 1052 aa8.85□□□□□ -0.99
COPB1-203ENST00000525214 OXR1Q8N573 874 aa8.85□□□□□ -0.99
COPB1-203ENST00000525214 LINC00116Q8NCU8 138 aa8.85□□□□□ -0.99
COPB1-203ENST00000525214 RASGRP4Q8TDF6 673 aa8.85□□□□□ -0.99
COPB1-203ENST00000525214 FAM84AQ96KN4 292 aa8.85□□□□□ -0.99
COPB1-203ENST00000525214 KRTAP9-9Q9BYP9 154 aa8.85□□□□□ -0.99
COPB1-203ENST00000525214 KRTAP9-4Q9BYQ2 154 aa8.85□□□□□ -0.99
COPB1-203ENST00000525214 CHST7Q9NS84 486 aa8.85□□□□□ -0.99
COPB1-203ENST00000525214 GFOD1Q9NXC2 390 aa8.85□□□□□ -0.99
COPB1-203ENST00000525214 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.85□□□□□ -0.99
COPB1-203ENST00000525214 FITM1A5D6W6 292 aa8.84□□□□□ -0.99
COPB1-203ENST00000525214 NOTOA8MTQ0 251 aa8.84□□□□□ -0.99
COPB1-203ENST00000525214 EFEMP2O95967 443 aa8.84□□□□□ -0.99
COPB1-203ENST00000525214 RPL10P27635 214 aaKnown RBP8.84□□□□□ -0.99
COPB1-203ENST00000525214 CTSKP43235 329 aa8.84□□□□□ -0.99
COPB1-203ENST00000525214 SOX9P48436 509 aa8.84□□□□□ -0.99
COPB1-203ENST00000525214 PMS1P54277 932 aaKnown RBP8.84□□□□□ -0.99
COPB1-203ENST00000525214 COL9A2Q14055 689 aaPredicted RBP8.84□□□□□ -0.99
COPB1-203ENST00000525214 ZPBP2Q6X784 338 aa8.84□□□□□ -0.99
COPB1-203ENST00000525214 LILRA2Q8N149 483 aa8.84□□□□□ -0.99
COPB1-203ENST00000525214 GPRASP2Q96D09 838 aa8.84□□□□□ -0.99
COPB1-203ENST00000525214 DHRS1Q96LJ7 313 aa8.84□□□□□ -0.99
COPB1-203ENST00000525214 DIRC2Q96SL1 478 aa8.84□□□□□ -0.99
COPB1-203ENST00000525214 NSUN3Q9H649 340 aaKnown RBP8.84□□□□□ -0.99
COPB1-203ENST00000525214 KCNK12Q9HB15 430 aa8.84□□□□□ -0.99
COPB1-203ENST00000525214 EFR3BQ9Y2G0 817 aa8.84□□□□□ -0.99
COPB1-203ENST00000525214 PCDHB12Q9Y5F1 795 aa8.84□□□□□ -0.99
COPB1-203ENST00000525214 SYPP08247 313 aa8.83□□□□□ -1
COPB1-203ENST00000525214 GUCY2CP25092 1073 aa8.83□□□□□ -1
COPB1-203ENST00000525214 GJA8P48165 433 aa8.83□□□□□ -1
COPB1-203ENST00000525214 PCBP3P57721 371 aaKnown RBP8.83□□□□□ -1
COPB1-203ENST00000525214 JAG1P78504 1218 aa8.83□□□□□ -1
COPB1-203ENST00000525214 DUSP4Q13115 394 aa8.83□□□□□ -1
COPB1-203ENST00000525214 TDRD10Q5VZ19 366 aaKnown RBP8.83□□□□□ -1
COPB1-203ENST00000525214 UNC5AQ6ZN44 842 aa8.83□□□□□ -1
COPB1-203ENST00000525214 WAPLQ7Z5K2 1190 aa8.83□□□□□ -1
COPB1-203ENST00000525214 KSR1Q8IVT5 923 aa8.83□□□□□ -1
COPB1-203ENST00000525214 ANKS4BQ8N8V4 417 aa8.83□□□□□ -1
COPB1-203ENST00000525214 MEIS1O00470 390 aa8.82□□□□□ -1
COPB1-203ENST00000525214 FKTNO75072 461 aa8.82□□□□□ -1
COPB1-203ENST00000525214 CHRNEQ04844 493 aa8.82□□□□□ -1
COPB1-203ENST00000525214 C7orf61Q8IZ16 206 aa8.82□□□□□ -1
COPB1-203ENST00000525214 SYTL4Q96C24 671 aaPredicted RBP8.82□□□□□ -1
COPB1-203ENST00000525214 SHISA4Q96DD7 197 aa8.82□□□□□ -1
COPB1-203ENST00000525214 FBXL21Q9UKT6 434 aa8.82□□□□□ -1
COPB1-203ENST00000525214 PSPNO60542 156 aa8.81□□□□□ -1
COPB1-203ENST00000525214 USP2O75604 605 aaPredicted RBP8.81□□□□□ -1
COPB1-203ENST00000525214 AXDND1Q5T1B0 1012 aaPredicted RBP8.81□□□□□ -1
COPB1-203ENST00000525214 DCAF15Q66K64 600 aa8.81□□□□□ -1
COPB1-203ENST00000525214 CCDC144CPQ8IYA2 1237 aa8.81□□□□□ -1
COPB1-203ENST00000525214 MAP6Q96JE9 813 aa8.81□□□□□ -1
COPB1-203ENST00000525214 SPATA32Q96LK8 384 aa8.81□□□□□ -1
COPB1-203ENST00000525214 PRR13Q9NZ81 148 aa8.81□□□□□ -1
COPB1-203ENST00000525214 LTBP3Q9NS15 1303 aa8.8□□□□□ -1
COPB1-203ENST00000525214 KRT1P04264 644 aa8.8□□□□□ -1
COPB1-203ENST00000525214 GALK1P51570 392 aa8.8□□□□□ -1
COPB1-203ENST00000525214 CRTC3Q6UUV7 619 aa8.8□□□□□ -1
COPB1-203ENST00000525214 SPPL2CQ8IUH8 684 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms