RNA–Protein interactions for RNA: ENST00000523978.1

EFCAB13-213, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 548 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-213ENST00000523978 MARCH6O60337 910 aa7.54□□□□□ -1.2
EFCAB13-213ENST00000523978 KRTAP19-4Q3LI73 84 aa7.54□□□□□ -1.2
EFCAB13-213ENST00000523978 TIGD5Q53EQ6 642 aa7.54□□□□□ -1.2
EFCAB13-213ENST00000523978 ANKLE2Q86XL3 938 aa7.54□□□□□ -1.2
EFCAB13-213ENST00000523978 PHACTR4Q8IZ21 702 aa7.54□□□□□ -1.2
EFCAB13-213ENST00000523978 PDZD8Q8NEN9 1154 aa7.54□□□□□ -1.2
EFCAB13-213ENST00000523978 IPO4Q8TEX9 1081 aaKnown RBP7.54□□□□□ -1.2
EFCAB13-213ENST00000523978 KIF2CQ99661 725 aa7.54□□□□□ -1.2
EFCAB13-213ENST00000523978 ASPNQ9BXN1 380 aa7.54□□□□□ -1.2
EFCAB13-213ENST00000523978 C19orf44Q9H6X5 657 aa7.54□□□□□ -1.2
EFCAB13-213ENST00000523978 KBTBD4Q9NVX7 518 aa7.54□□□□□ -1.2
EFCAB13-213ENST00000523978 NAP1L2Q9ULW6 460 aaPredicted RBP7.54□□□□□ -1.2
EFCAB13-213ENST00000523978 LAS1LQ9Y4W2 734 aaKnown RBP7.54□□□□□ -1.2
EFCAB13-213ENST00000523978 RBM47A0AV96 593 aaKnown RBP7.53□□□□□ -1.2
EFCAB13-213ENST00000523978 TLR3O15455 904 aaKnown RBP7.53□□□□□ -1.2
EFCAB13-213ENST00000523978 TPD52L2O43399 206 aaKnown RBP7.53□□□□□ -1.2
EFCAB13-213ENST00000523978 GORABQ5T7V8 394 aa7.53□□□□□ -1.2
EFCAB13-213ENST00000523978 LCNL1Q6ZST4 164 aa7.53□□□□□ -1.2
EFCAB13-213ENST00000523978 FAM196AQ6ZSG2 479 aa7.52□□□□□ -1.21
EFCAB13-213ENST00000523978 ERMP1Q7Z2K6 904 aa7.52□□□□□ -1.21
EFCAB13-213ENST00000523978 TMTC2Q8N394 836 aa7.52□□□□□ -1.21
EFCAB13-213ENST00000523978 DRC1Q96MC2 740 aa7.52□□□□□ -1.21
EFCAB13-213ENST00000523978 COPRSQ9NQ92 184 aa7.52□□□□□ -1.21
EFCAB13-213ENST00000523978 ANKRD62A6NC57 917 aa7.51□□□□□ -1.21
EFCAB13-213ENST00000523978 TMEM253P0C7T8 217 aa7.51□□□□□ -1.21
EFCAB13-213ENST00000523978 TEKQ02763 1124 aa7.51□□□□□ -1.21
EFCAB13-213ENST00000523978 OXR1Q8N573 874 aa7.51□□□□□ -1.21
EFCAB13-213ENST00000523978 ZSCAN18Q8TBC5 510 aaPredicted RBP7.51□□□□□ -1.21
EFCAB13-213ENST00000523978 DHX38Q92620 1227 aaKnown RBP7.51□□□□□ -1.21
EFCAB13-213ENST00000523978 VWCEQ96DN2 955 aa7.51□□□□□ -1.21
EFCAB13-213ENST00000523978 CD320Q9NPF0 282 aa7.51□□□□□ -1.21
EFCAB13-213ENST00000523978 EBF1Q9UH73 591 aa7.51□□□□□ -1.21
EFCAB13-213ENST00000523978 FITM1A5D6W6 292 aa7.5□□□□□ -1.21
EFCAB13-213ENST00000523978 NPIPB6E9PJ23 425 aa7.5□□□□□ -1.21
EFCAB13-213ENST00000523978 ERCC3P19447 782 aa7.5□□□□□ -1.21
EFCAB13-213ENST00000523978 FAM50AQ14320 339 aaKnown RBP7.5□□□□□ -1.21
EFCAB13-213ENST00000523978 FBXL19Q6PCT2 694 aa7.5□□□□□ -1.21
EFCAB13-213ENST00000523978 ATG14Q6ZNE5 492 aa7.5□□□□□ -1.21
EFCAB13-213ENST00000523978 FAM43BQ6ZT52 329 aaPredicted RBP7.5□□□□□ -1.21
EFCAB13-213ENST00000523978 LILRA2Q8N149 483 aa7.5□□□□□ -1.21
EFCAB13-213ENST00000523978 UNCXA6NJT0 531 aa7.49□□□□□ -1.21
EFCAB13-213ENST00000523978 SLC22A31A6NKX4 558 aa7.49□□□□□ -1.21
EFCAB13-213ENST00000523978 ETV2O00321 342 aaPredicted RBP7.49□□□□□ -1.21
EFCAB13-213ENST00000523978 RGS13O14921 159 aa7.49□□□□□ -1.21
EFCAB13-213ENST00000523978 UBOX5O94941 541 aa7.49□□□□□ -1.21
EFCAB13-213ENST00000523978 MED14OSP0DP75 135 aa7.49□□□□□ -1.21
EFCAB13-213ENST00000523978 GBP1P32455 592 aa7.49□□□□□ -1.21
EFCAB13-213ENST00000523978 NR0B2Q15466 257 aa7.49□□□□□ -1.21
EFCAB13-213ENST00000523978 CLEC16AQ2KHT3 1053 aa7.49□□□□□ -1.21
EFCAB13-213ENST00000523978 ARSHQ5FYA8 562 aa7.49□□□□□ -1.21
EFCAB13-213ENST00000523978 SECISBP2LQ93073 1101 aaKnown RBP7.49□□□□□ -1.21
EFCAB13-213ENST00000523978 SLC26A8Q96RN1 970 aa7.49□□□□□ -1.21
EFCAB13-213ENST00000523978 LRRC3Q9BY71 257 aa7.49□□□□□ -1.21
EFCAB13-213ENST00000523978 BRMS1Q9HCU9 246 aa7.49□□□□□ -1.21
EFCAB13-213ENST00000523978 KCNQ5Q9NR82 932 aa7.49□□□□□ -1.21
EFCAB13-213ENST00000523978 TCAF2A6NFQ2 919 aa7.48□□□□□ -1.21
EFCAB13-213ENST00000523978 ZSCAN22P10073 491 aaPredicted RBP7.48□□□□□ -1.21
EFCAB13-213ENST00000523978 GLDCP23378 1020 aa7.48□□□□□ -1.21
EFCAB13-213ENST00000523978 CHMP4BP1P59074 171 aa7.48□□□□□ -1.21
EFCAB13-213ENST00000523978 NMIQ13287 307 aaPredicted RBP7.48□□□□□ -1.21
EFCAB13-213ENST00000523978 OS9Q13438 667 aaPredicted RBP7.48□□□□□ -1.21
EFCAB13-213ENST00000523978 KCNA10Q16322 511 aa7.48□□□□□ -1.21
EFCAB13-213ENST00000523978 CWF19L2Q2TBE0 894 aaKnown RBP7.48□□□□□ -1.21
EFCAB13-213ENST00000523978 SYTL4Q96C24 671 aaPredicted RBP7.48□□□□□ -1.21
EFCAB13-213ENST00000523978 HIRIP3Q9BW71 556 aaPredicted RBP7.48□□□□□ -1.21
EFCAB13-213ENST00000523978 SLC6A17Q9H1V8 727 aa7.48□□□□□ -1.21
EFCAB13-213ENST00000523978 PCDHB14Q9Y5E9 798 aa7.48□□□□□ -1.21
EFCAB13-213ENST00000523978 ITGAEP38570 1179 aa7.47□□□□□ -1.21
EFCAB13-213ENST00000523978 EIF4A3P38919 411 aaKnown RBP7.47□□□□□ -1.21
EFCAB13-213ENST00000523978 MLECQ14165 292 aa7.47□□□□□ -1.21
EFCAB13-213ENST00000523978 IRF2BP1Q8IU81 584 aa7.47□□□□□ -1.21
EFCAB13-213ENST00000523978 KCNN1Q92952 543 aa7.47□□□□□ -1.21
EFCAB13-213ENST00000523978 G6PC3Q9BUM1 346 aa7.47□□□□□ -1.21
EFCAB13-213ENST00000523978 HDAC8Q9BY41 377 aa7.47□□□□□ -1.21
EFCAB13-213ENST00000523978 TERF2IPQ9NYB0 399 aa7.47□□□□□ -1.21
EFCAB13-213ENST00000523978 GMIPQ9P107 970 aa7.47□□□□□ -1.21
EFCAB13-213ENST00000523978 GPR160Q9UJ42 338 aa7.47□□□□□ -1.21
EFCAB13-213ENST00000523978 YBX2Q9Y2T7 364 aaKnown RBP7.47□□□□□ -1.21
EFCAB13-213ENST00000523978 SUPT16HQ9Y5B9 1047 aaKnown RBP7.47□□□□□ -1.21
EFCAB13-213ENST00000523978 GREM1O60565 184 aa7.46□□□□□ -1.22
EFCAB13-213ENST00000523978 RAG1P15918 1043 aa7.46□□□□□ -1.22
EFCAB13-213ENST00000523978 POLR2BP30876 1174 aaKnown RBP7.46□□□□□ -1.22
EFCAB13-213ENST00000523978 CRKP46108 304 aa7.46□□□□□ -1.22
EFCAB13-213ENST00000523978 GALK1P51570 392 aa7.46□□□□□ -1.22
EFCAB13-213ENST00000523978 CHRNEQ04844 493 aa7.46□□□□□ -1.22
EFCAB13-213ENST00000523978 DUSP4Q13115 394 aa7.46□□□□□ -1.22
EFCAB13-213ENST00000523978 OVOS1Q6IE37 1185 aa7.46□□□□□ -1.22
EFCAB13-213ENST00000523978 SPPL2CQ8IUH8 684 aa7.46□□□□□ -1.22
EFCAB13-213ENST00000523978 SIAH1Q8IUQ4 282 aa7.46□□□□□ -1.22
EFCAB13-213ENST00000523978 FTSJ3Q8IY81 847 aaKnown RBP7.46□□□□□ -1.22
EFCAB13-213ENST00000523978 ANKS4BQ8N8V4 417 aa7.46□□□□□ -1.22
EFCAB13-213ENST00000523978 SYTL5Q8TDW5 730 aaPredicted RBP7.46□□□□□ -1.22
EFCAB13-213ENST00000523978 LINC01599Q8WXQ3 324 aa7.46□□□□□ -1.22
EFCAB13-213ENST00000523978 INTS4Q96HW7 963 aaKnown RBP7.46□□□□□ -1.22
EFCAB13-213ENST00000523978 ASCC2Q9H1I8 757 aaPredicted RBP7.46□□□□□ -1.22
EFCAB13-213ENST00000523978 SMG5Q9UPR3 1016 aaKnown RBP7.46□□□□□ -1.22
EFCAB13-213ENST00000523978 ZNF281Q9Y2X9 895 aa7.46□□□□□ -1.22
EFCAB13-213ENST00000523978 SUGT1Q9Y2Z0 365 aa7.46□□□□□ -1.22
EFCAB13-213ENST00000523978 ROBO2Q9HCK4 1378 aa7.46□□□□□ -1.22
EFCAB13-213ENST00000523978 PSPNO60542 156 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms