RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 KLHL6Q8WZ60 621 aa9.22□□□□□ -0.93
CPNE3-206ENST00000523469 DHX38Q92620 1227 aaKnown RBP9.22□□□□□ -0.93
CPNE3-206ENST00000523469 HIRIP3Q9BW71 556 aaPredicted RBP9.22□□□□□ -0.93
CPNE3-206ENST00000523469 PRDM14Q9GZV8 571 aa9.22□□□□□ -0.93
CPNE3-206ENST00000523469 PRR13Q9NZ81 148 aa9.22□□□□□ -0.93
CPNE3-206ENST00000523469 PPP1R1BQ9UD71 204 aaPredicted RBP9.22□□□□□ -0.93
CPNE3-206ENST00000523469 TPP2P29144 1249 aaPredicted RBP9.21□□□□□ -0.94
CPNE3-206ENST00000523469 SNW1Q13573 536 aaKnown RBP9.21□□□□□ -0.94
CPNE3-206ENST00000523469 DCAF15Q66K64 600 aa9.21□□□□□ -0.94
CPNE3-206ENST00000523469 TMPRSS7Q7RTY8 843 aa9.21□□□□□ -0.94
CPNE3-206ENST00000523469 TMC3Q7Z5M5 1100 aa9.21□□□□□ -0.94
CPNE3-206ENST00000523469 SPRED2Q7Z698 418 aa9.21□□□□□ -0.94
CPNE3-206ENST00000523469 DRC1Q96MC2 740 aa9.21□□□□□ -0.94
CPNE3-206ENST00000523469 ATP13A1Q9HD20 1204 aa9.21□□□□□ -0.94
CPNE3-206ENST00000523469 FAM86C1Q9NVL1 165 aa9.21□□□□□ -0.94
CPNE3-206ENST00000523469 SHISA3A0PJX4 238 aa9.2□□□□□ -0.94
CPNE3-206ENST00000523469 SHOXO15266 292 aa9.2□□□□□ -0.94
CPNE3-206ENST00000523469 SIGLEC6O43699 453 aa9.2□□□□□ -0.94
CPNE3-206ENST00000523469 ADAMTS4O75173 837 aa9.2□□□□□ -0.94
CPNE3-206ENST00000523469 CD8BP10966 210 aa9.2□□□□□ -0.94
CPNE3-206ENST00000523469 RBL2Q08999 1139 aa9.2□□□□□ -0.94
CPNE3-206ENST00000523469 TCEAL1Q15170 157 aa9.2□□□□□ -0.94
CPNE3-206ENST00000523469 GAB4Q2WGN9 574 aa9.2□□□□□ -0.94
CPNE3-206ENST00000523469 ANGEL2Q5VTE6 544 aaKnown RBP9.2□□□□□ -0.94
CPNE3-206ENST00000523469 KIAA1211LQ6NV74 962 aa9.2□□□□□ -0.94
CPNE3-206ENST00000523469 NFXL1Q6ZNB6 911 aa9.2□□□□□ -0.94
CPNE3-206ENST00000523469 SYTL5Q8TDW5 730 aaPredicted RBP9.2□□□□□ -0.94
CPNE3-206ENST00000523469 HAUS7Q99871 368 aa9.2□□□□□ -0.94
CPNE3-206ENST00000523469 HDAC8Q9BY41 377 aa9.2□□□□□ -0.94
CPNE3-206ENST00000523469 CD247P20963 164 aa9.19□□□□□ -0.94
CPNE3-206ENST00000523469 CD96P40200 585 aa9.19□□□□□ -0.94
CPNE3-206ENST00000523469 IKZF1Q13422 519 aa9.19□□□□□ -0.94
CPNE3-206ENST00000523469 RAB33AQ14088 237 aa9.19□□□□□ -0.94
CPNE3-206ENST00000523469 NBPF6Q5VWK0 638 aa9.19□□□□□ -0.94
CPNE3-206ENST00000523469 ZNF574Q6ZN55 896 aaPredicted RBP9.19□□□□□ -0.94
CPNE3-206ENST00000523469 WFDC3Q8IUB2 231 aa9.19□□□□□ -0.94
CPNE3-206ENST00000523469 DAGLBQ8NCG7 672 aa9.19□□□□□ -0.94
CPNE3-206ENST00000523469 NBPF4Q96M43 638 aa9.19□□□□□ -0.94
CPNE3-206ENST00000523469 PAK6Q9NQU5 681 aaPredicted RBP9.19□□□□□ -0.94
CPNE3-206ENST00000523469 LMCD1Q9NZU5 365 aa9.19□□□□□ -0.94
CPNE3-206ENST00000523469 CBFA2T2O43439 604 aa9.18□□□□□ -0.94
CPNE3-206ENST00000523469 PRAMEF1O95521 474 aa9.18□□□□□ -0.94
CPNE3-206ENST00000523469 HEATR6Q6AI08 1181 aaKnown RBP9.18□□□□□ -0.94
CPNE3-206ENST00000523469 C6orf15Q6UXA7 325 aaPredicted RBP9.18□□□□□ -0.94
CPNE3-206ENST00000523469 FAM178BQ8IXR5 827 aa9.18□□□□□ -0.94
CPNE3-206ENST00000523469 ZNF655Q8N720 491 aaPredicted RBP9.18□□□□□ -0.94
CPNE3-206ENST00000523469 AGBL5Q8NDL9 886 aa9.18□□□□□ -0.94
CPNE3-206ENST00000523469 TRIM55Q9BYV6 548 aa9.18□□□□□ -0.94
CPNE3-206ENST00000523469 GP6Q9HCN6 339 aa9.18□□□□□ -0.94
CPNE3-206ENST00000523469 CHST7Q9NS84 486 aa9.18□□□□□ -0.94
CPNE3-206ENST00000523469 GFOD1Q9NXC2 390 aa9.18□□□□□ -0.94
CPNE3-206ENST00000523469 DUSP13Q9UII6 198 aa9.18□□□□□ -0.94
CPNE3-206ENST00000523469 ZNF451Q9Y4E5 1061 aa9.18□□□□□ -0.94
CPNE3-206ENST00000523469 WASH4PA8MWX3 477 aa9.17□□□□□ -0.94
CPNE3-206ENST00000523469 DDAH1O94760 285 aa9.17□□□□□ -0.94
CPNE3-206ENST00000523469 TP53INP2Q8IXH6 220 aa9.17□□□□□ -0.94
CPNE3-206ENST00000523469 KLHL25Q9H0H3 589 aa9.17□□□□□ -0.94
CPNE3-206ENST00000523469 GBP3Q9H0R5 595 aa9.17□□□□□ -0.94
CPNE3-206ENST00000523469 NACADO15069 1562 aa9.16□□□□□ -0.94
CPNE3-206ENST00000523469 CECR2Q9BXF3 1484 aa9.16□□□□□ -0.94
CPNE3-206ENST00000523469 LOC100996750A0A140TA64 210 aa9.16□□□□□ -0.94
CPNE3-206ENST00000523469 EPHX1P07099 455 aa9.16□□□□□ -0.94
CPNE3-206ENST00000523469 NAT2P11245 290 aa9.16□□□□□ -0.94
CPNE3-206ENST00000523469 ITGA4P13612 1032 aa9.16□□□□□ -0.94
CPNE3-206ENST00000523469 ZNF143P52747 638 aaPredicted RBP9.16□□□□□ -0.94
CPNE3-206ENST00000523469 DDR2Q16832 855 aa9.16□□□□□ -0.94
CPNE3-206ENST00000523469 NOL9Q5SY16 702 aaKnown RBP9.16□□□□□ -0.94
CPNE3-206ENST00000523469 SOGA3Q5TF21 947 aa9.16□□□□□ -0.94
CPNE3-206ENST00000523469 CREG2Q8IUH2 290 aa9.16□□□□□ -0.94
CPNE3-206ENST00000523469 Q8N3U1 123 aa9.16□□□□□ -0.94
CPNE3-206ENST00000523469 CELF2-AS1Q8N7Q2 184 aa9.16□□□□□ -0.94
CPNE3-206ENST00000523469 MICAL1Q8TDZ2 1067 aa9.16□□□□□ -0.94
CPNE3-206ENST00000523469 KRTAP4-6Q9BYQ5 205 aa9.16□□□□□ -0.94
CPNE3-206ENST00000523469 WHRNQ9P202 907 aa9.16□□□□□ -0.94
CPNE3-206ENST00000523469 FHOD1Q9Y613 1164 aa9.16□□□□□ -0.94
CPNE3-206ENST00000523469 A0A087WZG4 1122 aa9.15□□□□□ -0.94
CPNE3-206ENST00000523469 ANKRD34BA5PLL1 514 aa9.15□□□□□ -0.94
CPNE3-206ENST00000523469 B2RBV5 119 aa9.15□□□□□ -0.94
CPNE3-206ENST00000523469 U2SURPO15042 1029 aaKnown RBP9.15□□□□□ -0.94
CPNE3-206ENST00000523469 ESR1P03372 595 aa9.15□□□□□ -0.94
CPNE3-206ENST00000523469 FUT4P22083 530 aa9.15□□□□□ -0.94
CPNE3-206ENST00000523469 LTKP29376 864 aa9.15□□□□□ -0.94
CPNE3-206ENST00000523469 ZNF445P59923 1031 aa9.15□□□□□ -0.94
CPNE3-206ENST00000523469 ZP2Q05996 745 aa9.15□□□□□ -0.94
CPNE3-206ENST00000523469 UBXN4Q92575 508 aa9.15□□□□□ -0.94
CPNE3-206ENST00000523469 TCTN2Q96GX1 697 aa9.15□□□□□ -0.94
CPNE3-206ENST00000523469 PPM1BO75688 479 aa9.14□□□□□ -0.95
CPNE3-206ENST00000523469 GJB6O95452 261 aa9.14□□□□□ -0.95
CPNE3-206ENST00000523469 GP2P55259 537 aaKnown RBP9.14□□□□□ -0.95
CPNE3-206ENST00000523469 DSCC1Q9BVC3 393 aa9.14□□□□□ -0.95
CPNE3-206ENST00000523469 CARS2Q9HA77 564 aaKnown RBP9.14□□□□□ -0.95
CPNE3-206ENST00000523469 ST7Q9NRC1 585 aa9.14□□□□□ -0.95
CPNE3-206ENST00000523469 SUSD2Q9UGT4 822 aa9.14□□□□□ -0.95
CPNE3-206ENST00000523469 EGR3Q06889 387 aa9.13□□□□□ -0.95
CPNE3-206ENST00000523469 PLCL1Q15111 1095 aa9.13□□□□□ -0.95
CPNE3-206ENST00000523469 ADAT2Q7Z6V5 191 aaKnown RBP9.13□□□□□ -0.95
CPNE3-206ENST00000523469 NBPF11Q86T75 865 aa9.13□□□□□ -0.95
CPNE3-206ENST00000523469 BRF1Q92994 677 aa9.13□□□□□ -0.95
CPNE3-206ENST00000523469 APBA2Q99767 749 aa9.13□□□□□ -0.95
CPNE3-206ENST00000523469 MINPP1Q9UNW1 487 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms