RNA–Protein interactions for RNA: ENST00000523288.5

FAM49B-225, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 4,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-225ENST00000523288 SPCS2Q15005 226 aa4.3□□□□□ -1.72
FAM49B-225ENST00000523288 GIGYF2Q6Y7W6 1299 aaKnown RBP4.3□□□□□ -1.72
FAM49B-225ENST00000523288 RPAP2Q8IXW5 612 aaPredicted RBP4.3□□□□□ -1.72
FAM49B-225ENST00000523288 FAM177A1Q8N128 213 aaPredicted RBP4.3□□□□□ -1.72
FAM49B-225ENST00000523288 TCP11L2Q8N4U5 519 aa4.3□□□□□ -1.72
FAM49B-225ENST00000523288 CAVIN3Q969G5 261 aa4.3□□□□□ -1.72
FAM49B-225ENST00000523288 TSC22D3Q99576 134 aa4.3□□□□□ -1.72
FAM49B-225ENST00000523288 KAT14Q9H8E8 782 aa4.3□□□□□ -1.72
FAM49B-225ENST00000523288 LRP2BPQ9P2M1 347 aa4.3□□□□□ -1.72
FAM49B-225ENST00000523288 TRMT112Q9UI30 125 aaKnown RBP4.3□□□□□ -1.72
FAM49B-225ENST00000523288 RPL26L1Q9UNX3 145 aaKnown RBP4.3□□□□□ -1.72
FAM49B-225ENST00000523288 DLG5Q8TDM6 1919 aa4.3□□□□□ -1.72
FAM49B-225ENST00000523288 TNRQ92752 1358 aa4.3□□□□□ -1.72
FAM49B-225ENST00000523288 LRRC10BA6NIK2 292 aa4.3□□□□□ -1.72
FAM49B-225ENST00000523288 FANCGO15287 622 aa4.3□□□□□ -1.72
FAM49B-225ENST00000523288 TIMM44O43615 452 aa4.3□□□□□ -1.72
FAM49B-225ENST00000523288 PYGLP06737 847 aa4.3□□□□□ -1.72
FAM49B-225ENST00000523288 GBP2P32456 591 aaPredicted RBP4.3□□□□□ -1.72
FAM49B-225ENST00000523288 FKBP4Q02790 459 aaKnown RBP eCLIP4.3□□□□□ -1.72
FAM49B-225ENST00000523288 MAP3K12Q12852 859 aa4.3□□□□□ -1.72
FAM49B-225ENST00000523288 TWISTNBQ3B726 338 aaPredicted RBP4.3□□□□□ -1.72
FAM49B-225ENST00000523288 Q4G0T1 1027 aa4.3□□□□□ -1.72
FAM49B-225ENST00000523288 ANKRD20A8PQ5CZ79 823 aa4.3□□□□□ -1.72
FAM49B-225ENST00000523288 SH2D4BQ5SQS7 431 aa4.3□□□□□ -1.72
FAM49B-225ENST00000523288 TMEM57Q8N5G2 664 aa4.3□□□□□ -1.72
FAM49B-225ENST00000523288 COG1Q8WTW3 980 aa4.3□□□□□ -1.72
FAM49B-225ENST00000523288 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.3□□□□□ -1.728e-7■■■■□ 21.1
FAM49B-225ENST00000523288 ZBTB10Q96DT7 871 aa4.3□□□□□ -1.72
FAM49B-225ENST00000523288 IFT43Q96FT9 208 aa4.3□□□□□ -1.72
FAM49B-225ENST00000523288 PCMTD1Q96MG8 357 aaPredicted RBP4.3□□□□□ -1.72
FAM49B-225ENST00000523288 STK32BQ9NY57 414 aa4.3□□□□□ -1.72
FAM49B-225ENST00000523288 TPX2Q9ULW0 747 aaKnown RBP4.3□□□□□ -1.72
FAM49B-225ENST00000523288 PNPLA6Q8IY17 1366 aa4.3□□□□□ -1.72
FAM49B-225ENST00000523288 JCADQ9P266 1359 aa4.3□□□□□ -1.72
FAM49B-225ENST00000523288 GOLGA8CPA6NN73 597 aa4.3□□□□□ -1.72
FAM49B-225ENST00000523288 MYO1FO00160 1098 aa4.3□□□□□ -1.72
FAM49B-225ENST00000523288 CEP104O60308 925 aa4.3□□□□□ -1.72
FAM49B-225ENST00000523288 SFPQP23246 707 aaKnown RBP eCLIP4.3□□□□□ -1.72
FAM49B-225ENST00000523288 CCT6AP40227 531 aaKnown RBP4.3□□□□□ -1.72
FAM49B-225ENST00000523288 CCT5P48643 541 aa4.3□□□□□ -1.72
FAM49B-225ENST00000523288 SERPINB8P50452 374 aa4.3□□□□□ -1.72
FAM49B-225ENST00000523288 HDAC4P56524 1084 aa4.3□□□□□ -1.72
FAM49B-225ENST00000523288 NONOQ15233 471 aaKnown RBP eCLIP4.3□□□□□ -1.725e-6■■■■□ 21.2
FAM49B-225ENST00000523288 GPR162Q16538 588 aa4.3□□□□□ -1.72
FAM49B-225ENST00000523288 SOGA3Q5TF21 947 aa4.3□□□□□ -1.72
FAM49B-225ENST00000523288 SEPT14Q6ZU15 432 aa4.3□□□□□ -1.72
FAM49B-225ENST00000523288 MREGQ8N565 214 aa4.3□□□□□ -1.72
FAM49B-225ENST00000523288 EIF1ADQ8N9N8 165 aaKnown RBP4.3□□□□□ -1.72
FAM49B-225ENST00000523288 NSUN7Q8NE18 718 aaKnown RBP4.3□□□□□ -1.72
FAM49B-225ENST00000523288 AENQ8WTP8 325 aaKnown RBP4.3□□□□□ -1.72
FAM49B-225ENST00000523288 FAM81BQ96LP2 452 aa4.3□□□□□ -1.72
FAM49B-225ENST00000523288 ESYT1Q9BSJ8 1104 aa4.3□□□□□ -1.72
FAM49B-225ENST00000523288 STAP2Q9UGK3 403 aa4.3□□□□□ -1.72
FAM49B-225ENST00000523288 HOOK1Q9UJC3 728 aaKnown RBP4.3□□□□□ -1.72
FAM49B-225ENST00000523288 AKAP9Q99996 3911 aa4.3□□□□□ -1.72
FAM49B-225ENST00000523288 TMEM110-MUSTN1A8MSY1 372 aa4.29□□□□□ -1.72
FAM49B-225ENST00000523288 TTI1O43156 1089 aa4.29□□□□□ -1.72
FAM49B-225ENST00000523288 BAG6P46379 1132 aa4.29□□□□□ -1.72
FAM49B-225ENST00000523288 BTG3Q14201 252 aaPredicted RBP4.29□□□□□ -1.72
FAM49B-225ENST00000523288 MYSM1Q5VVJ2 828 aa4.29□□□□□ -1.72
FAM49B-225ENST00000523288 TMEM110Q86TL2 294 aa4.29□□□□□ -1.72
FAM49B-225ENST00000523288 IGSF22Q8N9C0 903 aa4.29□□□□□ -1.72
FAM49B-225ENST00000523288 KCNV2Q8TDN2 545 aa4.29□□□□□ -1.72
FAM49B-225ENST00000523288 SMARCC1Q92922 1105 aaPredicted RBP4.29□□□□□ -1.72
FAM49B-225ENST00000523288 NAF1Q96HR8 494 aaKnown RBP4.29□□□□□ -1.72
FAM49B-225ENST00000523288 DHRS1Q96LJ7 313 aa4.29□□□□□ -1.72
FAM49B-225ENST00000523288 FMNL2Q96PY5 1086 aa4.29□□□□□ -1.72
FAM49B-225ENST00000523288 KCNMB3Q9NPA1 279 aa4.29□□□□□ -1.72
FAM49B-225ENST00000523288 RTEL1Q9NZ71 1219 aa4.29□□□□□ -1.72
FAM49B-225ENST00000523288 NOP53Q9NZM5 478 aaKnown RBP4.29□□□□□ -1.72
FAM49B-225ENST00000523288 PPP2R2CQ9Y2T4 447 aa4.29□□□□□ -1.72
FAM49B-225ENST00000523288 TCHHQ07283 1943 aa4.29□□□□□ -1.72
FAM49B-225ENST00000523288 ECEL1O95672 775 aa4.29□□□□□ -1.72
FAM49B-225ENST00000523288 PDCP20941 246 aa4.29□□□□□ -1.72
FAM49B-225ENST00000523288 KRT9P35527 623 aa4.29□□□□□ -1.72
FAM49B-225ENST00000523288 USP14P54578 494 aa4.29□□□□□ -1.72
FAM49B-225ENST00000523288 ITIH4Q14624 930 aa4.29□□□□□ -1.72
FAM49B-225ENST00000523288 BCL2A1Q16548 175 aa4.29□□□□□ -1.72
FAM49B-225ENST00000523288 NME9Q86XW9 330 aa4.29□□□□□ -1.72
FAM49B-225ENST00000523288 RNF168Q8IYW5 571 aaPredicted RBP4.29□□□□□ -1.72
FAM49B-225ENST00000523288 SMARCC2Q8TAQ2 1214 aa4.29□□□□□ -1.72
FAM49B-225ENST00000523288 GFM2Q969S9 779 aaKnown RBP4.29□□□□□ -1.72
FAM49B-225ENST00000523288 SCLT1Q96NL6 688 aa4.29□□□□□ -1.72
FAM49B-225ENST00000523288 PLEKHF1Q96S99 279 aa4.29□□□□□ -1.72
FAM49B-225ENST00000523288 CGREF1Q99674 301 aa4.29□□□□□ -1.72
FAM49B-225ENST00000523288 NACAP1Q9BZK3 213 aa4.29□□□□□ -1.72
FAM49B-225ENST00000523288 TANGO6Q9C0B7 1094 aa4.29□□□□□ -1.72
FAM49B-225ENST00000523288 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.29□□□□□ -1.72
FAM49B-225ENST00000523288 BRD8Q9H0E9 1235 aa4.29□□□□□ -1.72
FAM49B-225ENST00000523288 IRF2BPLQ9H1B7 796 aa4.29□□□□□ -1.72
FAM49B-225ENST00000523288 GPCPD1Q9NPB8 672 aa4.29□□□□□ -1.72
FAM49B-225ENST00000523288 C1orf167Q5SNV9 1468 aa4.29□□□□□ -1.72
FAM49B-225ENST00000523288 WNK3Q9BYP7 1800 aa4.29□□□□□ -1.72
FAM49B-225ENST00000523288 LRRIQ3A6PVS8 624 aaPredicted RBP4.29□□□□□ -1.72
FAM49B-225ENST00000523288 LSM1O15116 133 aaKnown RBP4.29□□□□□ -1.72
FAM49B-225ENST00000523288 FLOT1O75955 427 aa4.29□□□□□ -1.72
FAM49B-225ENST00000523288 TOP1P11387 765 aaKnown RBP4.29□□□□□ -1.72
FAM49B-225ENST00000523288 XBP1P17861 261 aa4.29□□□□□ -1.72
FAM49B-225ENST00000523288 CCDC15Q0P6D6 951 aa4.29□□□□□ -1.72
FAM49B-225ENST00000523288 NAA25Q14CX7 972 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms