RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 EPN3Q9H201 632 aa9.82□□□□□ -0.84
NUDCD1-204ENST00000521439 LRRC4CQ9HCJ2 640 aa9.82□□□□□ -0.84
NUDCD1-204ENST00000521439 IGF2BP3O00425 579 aaKnown RBP eCLIP9.81□□□□□ -0.84
NUDCD1-204ENST00000521439 CBFA2T2O43439 604 aa9.81□□□□□ -0.84
NUDCD1-204ENST00000521439 KIR3DL1P43629 444 aa9.81□□□□□ -0.84
NUDCD1-204ENST00000521439 APBA2Q99767 749 aa9.81□□□□□ -0.84
NUDCD1-204ENST00000521439 SUSD2Q9UGT4 822 aa9.81□□□□□ -0.84
NUDCD1-204ENST00000521439 TBX22Q9Y458 520 aa9.81□□□□□ -0.84
NUDCD1-204ENST00000521439 EPHX1P07099 455 aa9.8□□□□□ -0.84
NUDCD1-204ENST00000521439 TCEAL1Q15170 157 aa9.8□□□□□ -0.84
NUDCD1-204ENST00000521439 NBPF9Q3BBW0 867 aa9.8□□□□□ -0.84
NUDCD1-204ENST00000521439 JAZF1Q86VZ6 243 aa9.8□□□□□ -0.84
NUDCD1-204ENST00000521439 KLHL25Q9H0H3 589 aa9.8□□□□□ -0.84
NUDCD1-204ENST00000521439 ZNF451Q9Y4E5 1061 aa9.8□□□□□ -0.84
NUDCD1-204ENST00000521439 CADPSQ9ULU8 1353 aa9.79□□□□□ -0.84
NUDCD1-204ENST00000521439 SHOXO15266 292 aa9.79□□□□□ -0.84
NUDCD1-204ENST00000521439 LRRN2O75325 713 aa9.79□□□□□ -0.84
NUDCD1-204ENST00000521439 CBX7O95931 251 aa9.79□□□□□ -0.84
NUDCD1-204ENST00000521439 CD247P20963 164 aa9.79□□□□□ -0.84
NUDCD1-204ENST00000521439 SLC10A6Q3KNW5 377 aa9.79□□□□□ -0.84
NUDCD1-204ENST00000521439 C22orf34Q6ZV56 151 aa9.79□□□□□ -0.84
NUDCD1-204ENST00000521439 SPATC1Q76KD6 591 aa9.79□□□□□ -0.84
NUDCD1-204ENST00000521439 LILRB2Q8N423 598 aa9.79□□□□□ -0.84
NUDCD1-204ENST00000521439 Q96M66 194 aa9.79□□□□□ -0.84
NUDCD1-204ENST00000521439 GBP3Q9H0R5 595 aa9.79□□□□□ -0.84
NUDCD1-204ENST00000521439 ZMYM5Q9UJ78 669 aa9.79□□□□□ -0.84
NUDCD1-204ENST00000521439 FBXL21Q9UKT6 434 aa9.79□□□□□ -0.84
NUDCD1-204ENST00000521439 KCNH3Q9ULD8 1083 aa9.79□□□□□ -0.84
NUDCD1-204ENST00000521439 PCDHB12Q9Y5F1 795 aa9.79□□□□□ -0.84
NUDCD1-204ENST00000521439 WNT11O96014 354 aa9.78□□□□□ -0.84
NUDCD1-204ENST00000521439 PRNPP04156 253 aa9.78□□□□□ -0.84
NUDCD1-204ENST00000521439 ZNF865P0CJ78 1059 aaPredicted RBP9.78□□□□□ -0.84
NUDCD1-204ENST00000521439 SV2CQ496J9 727 aa9.78□□□□□ -0.84
NUDCD1-204ENST00000521439 GP6Q9HCN6 339 aa9.78□□□□□ -0.84
NUDCD1-204ENST00000521439 BSDC1Q9NW68 430 aaPredicted RBP9.78□□□□□ -0.84
NUDCD1-204ENST00000521439 ZC3H7BQ9UGR2 993 aaKnown RBP9.78□□□□□ -0.84
NUDCD1-204ENST00000521439 PFDN2Q9UHV9 154 aa9.78□□□□□ -0.84
NUDCD1-204ENST00000521439 MRPL42Q9Y6G3 142 aaKnown RBP9.78□□□□□ -0.84
NUDCD1-204ENST00000521439 RBAK-RBAKDNI3L0D1 243 aa9.77□□□□□ -0.85
NUDCD1-204ENST00000521439 SSRP1Q08945 709 aaKnown RBP9.77□□□□□ -0.85
NUDCD1-204ENST00000521439 ADAT2Q7Z6V5 191 aaKnown RBP9.77□□□□□ -0.85
NUDCD1-204ENST00000521439 VSIG10LQ86VR7 867 aa9.77□□□□□ -0.85
NUDCD1-204ENST00000521439 DTWD2Q8NBA8 298 aa9.77□□□□□ -0.85
NUDCD1-204ENST00000521439 RNPC3Q96LT9 517 aaKnown RBP9.77□□□□□ -0.85
NUDCD1-204ENST00000521439 FGD4Q96M96 766 aa9.77□□□□□ -0.85
NUDCD1-204ENST00000521439 WHRNQ9P202 907 aa9.77□□□□□ -0.85
NUDCD1-204ENST00000521439 ANGEL1Q9UNK9 670 aaKnown RBP9.77□□□□□ -0.85
NUDCD1-204ENST00000521439 KDM2BQ8NHM5 1336 aa9.77□□□□□ -0.85
NUDCD1-204ENST00000521439 IQCA1LA6NCM1 817 aa9.76□□□□□ -0.85
NUDCD1-204ENST00000521439 GNAT3A8MTJ3 354 aa9.76□□□□□ -0.85
NUDCD1-204ENST00000521439 PRR33A8MZF0 331 aa9.76□□□□□ -0.85
NUDCD1-204ENST00000521439 DIAPH1O60610 1272 aaKnown RBP9.76□□□□□ -0.85
NUDCD1-204ENST00000521439 PPM1BO75688 479 aa9.76□□□□□ -0.85
NUDCD1-204ENST00000521439 ITGA4P13612 1032 aa9.76□□□□□ -0.85
NUDCD1-204ENST00000521439 SDE2Q6IQ49 451 aa9.76□□□□□ -0.85
NUDCD1-204ENST00000521439 PRDM14Q9GZV8 571 aa9.76□□□□□ -0.85
NUDCD1-204ENST00000521439 MKNK2Q9HBH9 465 aa9.76□□□□□ -0.85
NUDCD1-204ENST00000521439 PRR13Q9NZ81 148 aa9.76□□□□□ -0.85
NUDCD1-204ENST00000521439 CCDC39Q9UFE4 941 aa9.76□□□□□ -0.85
NUDCD1-204ENST00000521439 AGRPO00253 132 aa9.75□□□□□ -0.85
NUDCD1-204ENST00000521439 GP2P55259 537 aaKnown RBP9.75□□□□□ -0.85
NUDCD1-204ENST00000521439 SNW1Q13573 536 aaKnown RBP9.75□□□□□ -0.85
NUDCD1-204ENST00000521439 NLGN1Q8N2Q7 840 aa9.75□□□□□ -0.85
NUDCD1-204ENST00000521439 MFSD4AQ8N468 514 aa9.75□□□□□ -0.85
NUDCD1-204ENST00000521439 ZNF513Q8N8E2 541 aaPredicted RBP9.75□□□□□ -0.85
NUDCD1-204ENST00000521439 PIWIL2Q8TC59 973 aaKnown RBP9.75□□□□□ -0.85
NUDCD1-204ENST00000521439 SH3TC2Q8TF17 1288 aa9.75□□□□□ -0.85
NUDCD1-204ENST00000521439 SGSM3Q96HU1 749 aa9.75□□□□□ -0.85
NUDCD1-204ENST00000521439 APEX2Q9UBZ4 518 aa9.75□□□□□ -0.85
NUDCD1-204ENST00000521439 SUGT1Q9Y2Z0 365 aa9.75□□□□□ -0.85
NUDCD1-204ENST00000521439 CAPN6Q9Y6Q1 641 aa9.75□□□□□ -0.85
NUDCD1-204ENST00000521439 A0A087WZG4 1122 aa9.74□□□□□ -0.85
NUDCD1-204ENST00000521439 ADAMTS4O75173 837 aa9.74□□□□□ -0.85
NUDCD1-204ENST00000521439 OXCT1P55809 520 aa9.74□□□□□ -0.85
NUDCD1-204ENST00000521439 TNK2Q07912 1038 aa9.74□□□□□ -0.85
NUDCD1-204ENST00000521439 NOL9Q5SY16 702 aaKnown RBP9.74□□□□□ -0.85
NUDCD1-204ENST00000521439 ARHGAP27Q6ZUM4 889 aa9.74□□□□□ -0.85
NUDCD1-204ENST00000521439 LRRC47Q8N1G4 583 aaKnown RBP9.74□□□□□ -0.85
NUDCD1-204ENST00000521439 JMYQ8N9B5 988 aa9.74□□□□□ -0.85
NUDCD1-204ENST00000521439 THAP3Q8WTV1 239 aaPredicted RBP9.74□□□□□ -0.85
NUDCD1-204ENST00000521439 SPATA9Q9BWV2 254 aa9.74□□□□□ -0.85
NUDCD1-204ENST00000521439 LRP2BPQ9P2M1 347 aa9.74□□□□□ -0.85
NUDCD1-204ENST00000521439 ZNF445P59923 1031 aa9.73□□□□□ -0.85
NUDCD1-204ENST00000521439 C2orf27AQ580R0 203 aa9.73□□□□□ -0.85
NUDCD1-204ENST00000521439 FAM177A1Q8N128 213 aaPredicted RBP9.73□□□□□ -0.85
NUDCD1-204ENST00000521439 LRRN4CLQ8ND94 238 aa9.73□□□□□ -0.85
NUDCD1-204ENST00000521439 NETO1Q8TDF5 533 aa9.73□□□□□ -0.85
NUDCD1-204ENST00000521439 PPP1R14AQ96A00 147 aa9.73□□□□□ -0.85
NUDCD1-204ENST00000521439 RCC1LQ96I51 464 aaKnown RBP9.73□□□□□ -0.85
NUDCD1-204ENST00000521439 ASCC2Q9H1I8 757 aaPredicted RBP9.73□□□□□ -0.85
NUDCD1-204ENST00000521439 GFOD1Q9NXC2 390 aa9.73□□□□□ -0.85
NUDCD1-204ENST00000521439 FHOD1Q9Y613 1164 aa9.73□□□□□ -0.85
NUDCD1-204ENST00000521439 FAM155AB1AL88 458 aaPredicted RBP9.72□□□□□ -0.85
NUDCD1-204ENST00000521439 TMC3Q7Z5M5 1100 aa9.72□□□□□ -0.85
NUDCD1-204ENST00000521439 FAM181AQ8N9Y4 354 aa9.72□□□□□ -0.85
NUDCD1-204ENST00000521439 BVESQ8NE79 360 aa9.72□□□□□ -0.85
NUDCD1-204ENST00000521439 SYTL5Q8TDW5 730 aaPredicted RBP9.72□□□□□ -0.85
NUDCD1-204ENST00000521439 BRF1Q92994 677 aa9.72□□□□□ -0.85
NUDCD1-204ENST00000521439 CWC22Q9HCG8 908 aaKnown RBP9.72□□□□□ -0.85
NUDCD1-204ENST00000521439 DIS3Q9Y2L1 958 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 298.4 ms