RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 VGLL4Q14135 290 aa17.47■□□□□ 0.39
SREK1-209ENST00000520953 CCDC96Q2M329 555 aa17.47■□□□□ 0.39
SREK1-209ENST00000520953 ISY1Q9ULR0 285 aaKnown RBP17.47■□□□□ 0.39
SREK1-209ENST00000520953 TMX2Q9Y320 296 aa17.47■□□□□ 0.39
SREK1-209ENST00000520953 BRD1O95696 1058 aa17.47■□□□□ 0.39
SREK1-209ENST00000520953 KIF5BP33176 963 aa17.47■□□□□ 0.39
SREK1-209ENST00000520953 HMGN5P82970 282 aaKnown RBP17.47■□□□□ 0.39
SREK1-209ENST00000520953 PKN1Q16512 942 aa17.47■□□□□ 0.39
SREK1-209ENST00000520953 FOXD4L6Q3SYB3 417 aaPredicted RBP17.47■□□□□ 0.39
SREK1-209ENST00000520953 FOXD4L3Q6VB84 417 aaPredicted RBP17.47■□□□□ 0.39
SREK1-209ENST00000520953 HOOK2Q96ED9 719 aa17.47■□□□□ 0.39
SREK1-209ENST00000520953 MAP3K14Q99558 947 aa17.47■□□□□ 0.39
SREK1-209ENST00000520953 MYH6P13533 1939 aa17.46■□□□□ 0.39
SREK1-209ENST00000520953 CDKL5O76039 1030 aa17.46■□□□□ 0.39
SREK1-209ENST00000520953 PTPRAP18433 802 aa17.46■□□□□ 0.39
SREK1-209ENST00000520953 CPLX2Q6PUV4 134 aaKnown RBP17.46■□□□□ 0.39
SREK1-209ENST00000520953 FERMT3Q86UX7 667 aa17.46■□□□□ 0.39
SREK1-209ENST00000520953 ARHGEF10LQ9HCE6 1279 aa17.46■□□□□ 0.39
SREK1-209ENST00000520953 VAT1LQ9HCJ6 419 aa17.46■□□□□ 0.39
SREK1-209ENST00000520953 SNCAIPQ9Y6H5 919 aa17.46■□□□□ 0.39
SREK1-209ENST00000520953 PHIPQ8WWQ0 1821 aa17.46■□□□□ 0.39
SREK1-209ENST00000520953 DDX11L8A8MPP1 907 aa17.46■□□□□ 0.39
SREK1-209ENST00000520953 TTLL12Q14166 644 aaPredicted RBP17.46■□□□□ 0.39
SREK1-209ENST00000520953 LDHDQ86WU2 507 aa17.46■□□□□ 0.39
SREK1-209ENST00000520953 ALG1Q9BT22 464 aa17.46■□□□□ 0.39
SREK1-209ENST00000520953 SLC1A4P43007 532 aa17.45■□□□□ 0.38
SREK1-209ENST00000520953 GMCL1P1Q8NEA9 526 aa17.45■□□□□ 0.38
SREK1-209ENST00000520953 ZHX2Q9Y6X8 837 aa17.45■□□□□ 0.38
SREK1-209ENST00000520953 STK36Q9NRP7 1315 aa17.45■□□□□ 0.38
SREK1-209ENST00000520953 PPP1R12BO60237 982 aaPredicted RBP17.45■□□□□ 0.38
SREK1-209ENST00000520953 MAP3K9P80192 1104 aa17.45■□□□□ 0.38
SREK1-209ENST00000520953 SPP2Q13103 211 aa17.45■□□□□ 0.38
SREK1-209ENST00000520953 MTMR2Q13614 643 aa17.45■□□□□ 0.38
SREK1-209ENST00000520953 PPP2R5BQ15173 497 aa17.45■□□□□ 0.38
SREK1-209ENST00000520953 PICK1Q9NRD5 415 aa17.45■□□□□ 0.38
SREK1-209ENST00000520953 TRIM75PA6NK02 468 aa17.44■□□□□ 0.38
SREK1-209ENST00000520953 SNAP25P60880 206 aa17.44■□□□□ 0.38
SREK1-209ENST00000520953 FAM83BQ5T0W9 1011 aa17.44■□□□□ 0.38
SREK1-209ENST00000520953 HOMER1Q86YM7 354 aa17.44■□□□□ 0.38
SREK1-209ENST00000520953 GBP4Q96PP9 640 aa17.44■□□□□ 0.38
SREK1-209ENST00000520953 FEZ1Q99689 392 aa17.44■□□□□ 0.38
SREK1-209ENST00000520953 RNF26Q9BY78 433 aaPredicted RBP17.44■□□□□ 0.38
SREK1-209ENST00000520953 VCPKMTQ9H867 229 aa17.44■□□□□ 0.38
SREK1-209ENST00000520953 ELP3Q9H9T3 547 aa17.44■□□□□ 0.38
SREK1-209ENST00000520953 PRPF3O43395 683 aaKnown RBP17.43■□□□□ 0.38
SREK1-209ENST00000520953 NUCB2P80303 420 aa17.43■□□□□ 0.38
SREK1-209ENST00000520953 ASPRV1Q53RT3 343 aa17.43■□□□□ 0.38
SREK1-209ENST00000520953 PPP4R3BQ5MIZ7 849 aa17.43■□□□□ 0.38
SREK1-209ENST00000520953 TRIM22Q8IYM9 498 aa17.43■□□□□ 0.38
SREK1-209ENST00000520953 GPKOWQ92917 476 aaPredicted RBP eCLIP17.43■□□□□ 0.381e-6■□□□□ 10.9
SREK1-209ENST00000520953 KCNJ14Q9UNX9 436 aa17.43■□□□□ 0.38
SREK1-209ENST00000520953 ADAMTS3O15072 1205 aa17.43■□□□□ 0.38
SREK1-209ENST00000520953 TRAK2O60296 914 aa17.43■□□□□ 0.38
SREK1-209ENST00000520953 ZSCAN22P10073 491 aaPredicted RBP17.43■□□□□ 0.38
SREK1-209ENST00000520953 NOL9Q5SY16 702 aaKnown RBP17.43■□□□□ 0.38
SREK1-209ENST00000520953 FAM173BQ6P4H8 233 aa17.43■□□□□ 0.38
SREK1-209ENST00000520953 DCAF4Q8WV16 495 aa17.43■□□□□ 0.38
SREK1-209ENST00000520953 C8orf76Q96K31 380 aa17.43■□□□□ 0.38
SREK1-209ENST00000520953 PIGSQ96S52 555 aa17.43■□□□□ 0.38
SREK1-209ENST00000520953 VPS54Q9P1Q0 977 aa17.43■□□□□ 0.38
SREK1-209ENST00000520953 USP17L10C9JJH3 530 aa17.42■□□□□ 0.38
SREK1-209ENST00000520953 DEXIO95424 95 aa17.42■□□□□ 0.38
SREK1-209ENST00000520953 TAL1P17542 331 aaPredicted RBP17.42■□□□□ 0.38
SREK1-209ENST00000520953 NF2P35240 595 aa17.42■□□□□ 0.38
SREK1-209ENST00000520953 TYW1BQ6NUM6 668 aa17.42■□□□□ 0.38
SREK1-209ENST00000520953 ADGRF4Q8IZF3 695 aa17.42■□□□□ 0.38
SREK1-209ENST00000520953 GMCL1Q96IK5 515 aa17.42■□□□□ 0.38
SREK1-209ENST00000520953 EMILIN3Q9NT22 766 aa17.42■□□□□ 0.38
SREK1-209ENST00000520953 FBXO28Q9NVF7 368 aa17.42■□□□□ 0.38
SREK1-209ENST00000520953 TMEM232C9JQI7 657 aa17.42■□□□□ 0.38
SREK1-209ENST00000520953 H3BQV1 296 aa17.42■□□□□ 0.38
SREK1-209ENST00000520953 BMP3P12645 472 aa17.42■□□□□ 0.38
SREK1-209ENST00000520953 IREB2P48200 963 aaKnown RBP17.42■□□□□ 0.38
SREK1-209ENST00000520953 GNAQP50148 359 aa17.42■□□□□ 0.38
SREK1-209ENST00000520953 IFFO2Q5TF58 517 aa17.42■□□□□ 0.38
SREK1-209ENST00000520953 JMJD4Q9H9V9 463 aa17.42■□□□□ 0.38
SREK1-209ENST00000520953 GOPCQ9HD26 462 aa17.42■□□□□ 0.38
SREK1-209ENST00000520953 WDR33Q9C0J8 1336 aaKnown RBP17.41■□□□□ 0.38
SREK1-209ENST00000520953 PDCP20941 246 aa17.41■□□□□ 0.38
SREK1-209ENST00000520953 KRT40Q6A162 431 aa17.41■□□□□ 0.38
SREK1-209ENST00000520953 SAMD1Q6SPF0 538 aaPredicted RBP17.41■□□□□ 0.38
SREK1-209ENST00000520953 ZNF280CQ8ND82 737 aa17.41■□□□□ 0.38
SREK1-209ENST00000520953 FBXO18Q8NFZ0 1043 aa17.41■□□□□ 0.38
SREK1-209ENST00000520953 SPZ1Q9BXG8 430 aa17.41■□□□□ 0.38
SREK1-209ENST00000520953 RIOX1Q9H6W3 641 aa17.41■□□□□ 0.38
SREK1-209ENST00000520953 KIF28PB7ZC32 967 aa17.4■□□□□ 0.38
SREK1-209ENST00000520953 PPP1R11O60927 126 aaPredicted RBP17.4■□□□□ 0.38
SREK1-209ENST00000520953 ITGBL1O95965 494 aaPredicted RBP17.4■□□□□ 0.38
SREK1-209ENST00000520953 F13A1P00488 732 aa17.4■□□□□ 0.38
SREK1-209ENST00000520953 HMGCS2P54868 508 aa17.4■□□□□ 0.38
SREK1-209ENST00000520953 AKAP17AQ02040 695 aaKnown RBP17.4■□□□□ 0.38
SREK1-209ENST00000520953 CLEC17AQ6ZS10 378 aa17.4■□□□□ 0.38
SREK1-209ENST00000520953 WDR18Q9BV38 432 aa17.4■□□□□ 0.38
SREK1-209ENST00000520953 KIAA1683Q9H0B3 1180 aa17.4■□□□□ 0.38
SREK1-209ENST00000520953 GINM1Q9NU53 330 aa17.4■□□□□ 0.38
SREK1-209ENST00000520953 AFG3L2Q9Y4W6 797 aa17.4■□□□□ 0.38
SREK1-209ENST00000520953 PFKFB3Q16875 520 aaPredicted RBP17.4■□□□□ 0.38
SREK1-209ENST00000520953 GPATCH4Q5T3I0 446 aaKnown RBP17.4■□□□□ 0.38
SREK1-209ENST00000520953 WWC2Q6AWC2 1192 aa17.4■□□□□ 0.38
SREK1-209ENST00000520953 CSADQ9Y600 493 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms