RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 SCAF8Q9UPN6 1271 aaKnown RBP6.6□□□□□ -1.35
CTNNA1-220ENST00000520260 AFG3L2Q9Y4W6 797 aa6.6□□□□□ -1.35
CTNNA1-220ENST00000520260 IVNS1ABPQ9Y6Y0 642 aa6.6□□□□□ -1.35
CTNNA1-220ENST00000520260 POLR2AP24928 1970 aaKnown RBP6.59□□□□□ -1.35
CTNNA1-220ENST00000520260 CCDC196A0A1B0GTZ2 297 aa6.59□□□□□ -1.35
CTNNA1-220ENST00000520260 DDX11L8A8MPP1 907 aa6.59□□□□□ -1.35
CTNNA1-220ENST00000520260 B4DLN1 442 aa6.59□□□□□ -1.35
CTNNA1-220ENST00000520260 ZBED4O75132 1171 aa6.59□□□□□ -1.35
CTNNA1-220ENST00000520260 TRPA1O75762 1119 aa6.59□□□□□ -1.35
CTNNA1-220ENST00000520260 TOP1P11387 765 aaKnown RBP6.59□□□□□ -1.35
CTNNA1-220ENST00000520260 MCM5P33992 734 aa6.59□□□□□ -1.35
CTNNA1-220ENST00000520260 SHMT1P34896 483 aa6.59□□□□□ -1.35
CTNNA1-220ENST00000520260 SLC1A4P43007 532 aa6.59□□□□□ -1.35
CTNNA1-220ENST00000520260 GNAQP50148 359 aa6.59□□□□□ -1.35
CTNNA1-220ENST00000520260 MRPL12P52815 198 aaKnown RBP6.59□□□□□ -1.35
CTNNA1-220ENST00000520260 HMGCS2P54868 508 aa6.59□□□□□ -1.35
CTNNA1-220ENST00000520260 FCGRTP55899 365 aa6.59□□□□□ -1.35
CTNNA1-220ENST00000520260 TFAP4Q01664 338 aa6.59□□□□□ -1.35
CTNNA1-220ENST00000520260 GPATCH4Q5T3I0 446 aaKnown RBP6.59□□□□□ -1.35
CTNNA1-220ENST00000520260 IFIT1BQ5T764 474 aaKnown RBP6.59□□□□□ -1.35
CTNNA1-220ENST00000520260 GPR153Q6NV75 609 aa6.59□□□□□ -1.35
CTNNA1-220ENST00000520260 MOB2Q70IA6 237 aa6.59□□□□□ -1.35
CTNNA1-220ENST00000520260 CATIPQ7Z7H3 387 aa6.59□□□□□ -1.35
CTNNA1-220ENST00000520260 NBPF11Q86T75 865 aa6.59□□□□□ -1.35
CTNNA1-220ENST00000520260 DGKHQ86XP1 1220 aa6.59□□□□□ -1.35
CTNNA1-220ENST00000520260 ZFPM1Q8IX07 1006 aa6.59□□□□□ -1.35
CTNNA1-220ENST00000520260 DNAJC5GQ8N7S2 189 aa6.59□□□□□ -1.35
CTNNA1-220ENST00000520260 GMCL1P1Q8NEA9 526 aa6.59□□□□□ -1.35
CTNNA1-220ENST00000520260 DCAF4Q8WV16 495 aa6.59□□□□□ -1.35
CTNNA1-220ENST00000520260 SOCS4Q8WXH5 440 aa6.59□□□□□ -1.35
CTNNA1-220ENST00000520260 COA7Q96BR5 231 aa6.59□□□□□ -1.35
CTNNA1-220ENST00000520260 TMEM87BQ96K49 555 aa6.59□□□□□ -1.35
CTNNA1-220ENST00000520260 C12orf42Q96LP6 360 aa6.59□□□□□ -1.35
CTNNA1-220ENST00000520260 NAP1L5Q96NT1 182 aaPredicted RBP6.59□□□□□ -1.35
CTNNA1-220ENST00000520260 VCPKMTQ9H867 229 aa6.59□□□□□ -1.35
CTNNA1-220ENST00000520260 TCP11L1Q9NUJ3 509 aa6.59□□□□□ -1.35
CTNNA1-220ENST00000520260 FBXO40Q9UH90 709 aa6.59□□□□□ -1.35
CTNNA1-220ENST00000520260 FEM1BQ9UK73 627 aa6.59□□□□□ -1.35
CTNNA1-220ENST00000520260 TMX2Q9Y320 296 aa6.59□□□□□ -1.35
CTNNA1-220ENST00000520260 MYH8P13535 1937 aa6.58□□□□□ -1.36
CTNNA1-220ENST00000520260 WDR19Q8NEZ3 1342 aa6.58□□□□□ -1.36
CTNNA1-220ENST00000520260 CCDC69A6NI79 296 aa6.58□□□□□ -1.36
CTNNA1-220ENST00000520260 TRAK2O60296 914 aa6.58□□□□□ -1.36
CTNNA1-220ENST00000520260 TLR2O60603 784 aa6.58□□□□□ -1.36
CTNNA1-220ENST00000520260 AOC2O75106 756 aa6.58□□□□□ -1.36
CTNNA1-220ENST00000520260 FLOT1O75955 427 aa6.58□□□□□ -1.36
CTNNA1-220ENST00000520260 SLC25A27O95847 323 aa6.58□□□□□ -1.36
CTNNA1-220ENST00000520260 RASA1P20936 1047 aa6.58□□□□□ -1.36
CTNNA1-220ENST00000520260 MAPK4P31152 587 aa6.58□□□□□ -1.36
CTNNA1-220ENST00000520260 HOXA7P31268 230 aaPredicted RBP6.58□□□□□ -1.36
CTNNA1-220ENST00000520260 STAT2P52630 851 aa6.58□□□□□ -1.36
CTNNA1-220ENST00000520260 TERF1P54274 439 aa6.58□□□□□ -1.36
CTNNA1-220ENST00000520260 SP3Q02447 781 aa6.58□□□□□ -1.36
CTNNA1-220ENST00000520260 COG2Q14746 738 aa6.58□□□□□ -1.36
CTNNA1-220ENST00000520260 SEPT2Q15019 361 aa6.58□□□□□ -1.36
CTNNA1-220ENST00000520260 PPP2R5BQ15173 497 aa6.58□□□□□ -1.36
CTNNA1-220ENST00000520260 ANKRD1Q15327 319 aa6.58□□□□□ -1.36
CTNNA1-220ENST00000520260 FAM110CQ1W6H9 321 aa6.58□□□□□ -1.36
CTNNA1-220ENST00000520260 CCDC96Q2M329 555 aa6.58□□□□□ -1.36
CTNNA1-220ENST00000520260 CPLX2Q6PUV4 134 aaKnown RBP6.58□□□□□ -1.36
CTNNA1-220ENST00000520260 NFXL1Q6ZNB6 911 aa6.58□□□□□ -1.36
CTNNA1-220ENST00000520260 CCDC129Q6ZRS4 1044 aa6.58□□□□□ -1.36
CTNNA1-220ENST00000520260 GPRC5AQ8NFJ5 357 aa6.58□□□□□ -1.36
CTNNA1-220ENST00000520260 CTCFLQ8NI51 663 aaPredicted RBP6.58□□□□□ -1.36
CTNNA1-220ENST00000520260 MAP4K1Q92918 833 aa6.58□□□□□ -1.36
CTNNA1-220ENST00000520260 GMCL1Q96IK5 515 aa6.58□□□□□ -1.36
CTNNA1-220ENST00000520260 SEC62Q99442 399 aaKnown RBP6.58□□□□□ -1.36
CTNNA1-220ENST00000520260 MAF1Q9H063 256 aa6.58□□□□□ -1.36
CTNNA1-220ENST00000520260 ZMYND15Q9H091 742 aa6.58□□□□□ -1.36
CTNNA1-220ENST00000520260 ZSWIM6Q9HCJ5 1215 aa6.58□□□□□ -1.36
CTNNA1-220ENST00000520260 EPB41L4AQ9HCS5 686 aaPredicted RBP6.58□□□□□ -1.36
CTNNA1-220ENST00000520260 RNF186Q9NXI6 227 aa6.58□□□□□ -1.36
CTNNA1-220ENST00000520260 MTMR4Q9NYA4 1195 aa6.58□□□□□ -1.36
CTNNA1-220ENST00000520260 RBM27Q9P2N5 1060 aaKnown RBP6.58□□□□□ -1.36
CTNNA1-220ENST00000520260 CLIP2Q9UDT6 1046 aa6.58□□□□□ -1.36
CTNNA1-220ENST00000520260 CIZ1Q9ULV3 898 aaPredicted RBP6.58□□□□□ -1.36
CTNNA1-220ENST00000520260 BOLA1Q9Y3E2 137 aa6.58□□□□□ -1.36
CTNNA1-220ENST00000520260 RBM8AQ9Y5S9 174 aaKnown RBP6.58□□□□□ -1.36
CTNNA1-220ENST00000520260 DDX60LQ5H9U9 1706 aaKnown RBP6.58□□□□□ -1.36
CTNNA1-220ENST00000520260 FAM196BA6NMK8 535 aa6.57□□□□□ -1.36
CTNNA1-220ENST00000520260 ESPNB1AK53 854 aa6.57□□□□□ -1.36
CTNNA1-220ENST00000520260 BTBD19C9JJ37 291 aa6.57□□□□□ -1.36
CTNNA1-220ENST00000520260 TNPO2O14787 897 aaKnown RBP6.57□□□□□ -1.36
CTNNA1-220ENST00000520260 IFIT3O14879 490 aaKnown RBP6.57□□□□□ -1.36
CTNNA1-220ENST00000520260 DHX16O60231 1041 aaKnown RBP6.57□□□□□ -1.36
CTNNA1-220ENST00000520260 FMNL1O95466 1100 aaPredicted RBP6.57□□□□□ -1.36
CTNNA1-220ENST00000520260 BMP3P12645 472 aa6.57□□□□□ -1.36
CTNNA1-220ENST00000520260 EEF2P13639 858 aaKnown RBP6.57□□□□□ -1.36
CTNNA1-220ENST00000520260 AKR1B1P15121 316 aa6.57□□□□□ -1.36
CTNNA1-220ENST00000520260 VCAM1P19320 739 aa6.57□□□□□ -1.36
CTNNA1-220ENST00000520260 DDIT3P35638 169 aa6.57□□□□□ -1.36
CTNNA1-220ENST00000520260 OAZ1P54368 228 aa6.57□□□□□ -1.36
CTNNA1-220ENST00000520260 ANAPC15P60006 121 aa6.57□□□□□ -1.36
CTNNA1-220ENST00000520260 HAND2P61296 217 aa6.57□□□□□ -1.36
CTNNA1-220ENST00000520260 HTRA3P83110 453 aa6.57□□□□□ -1.36
CTNNA1-220ENST00000520260 FMR1Q06787 632 aaKnown RBP eCLIP6.57□□□□□ -1.36
CTNNA1-220ENST00000520260 WTAPQ15007 396 aa6.57□□□□□ -1.36
CTNNA1-220ENST00000520260 ZYXQ15942 572 aaKnown RBP6.57□□□□□ -1.36
CTNNA1-220ENST00000520260 TKFCQ3LXA3 575 aa6.57□□□□□ -1.36
CTNNA1-220ENST00000520260 ASPRV1Q53RT3 343 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms