RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 PLXNB2O15031 1838 aa8.93□□□□□ -0.98
SDCBP-206ENST00000519115 HTTP42858 3142 aa8.93□□□□□ -0.98
SDCBP-206ENST00000519115 KIAA0100Q14667 2235 aaKnown RBP8.92□□□□□ -0.98
SDCBP-206ENST00000519115 USP17L15C9J2P7 530 aa8.92□□□□□ -0.98
SDCBP-206ENST00000519115 USP17L13C9JLJ4 530 aa8.92□□□□□ -0.98
SDCBP-206ENST00000519115 USP17L11C9JVI0 530 aa8.92□□□□□ -0.98
SDCBP-206ENST00000519115 USP17L18D6R9N7 530 aa8.92□□□□□ -0.98
SDCBP-206ENST00000519115 USP17L22D6RA61 530 aa8.92□□□□□ -0.98
SDCBP-206ENST00000519115 USP17L17D6RBQ6 530 aa8.92□□□□□ -0.98
SDCBP-206ENST00000519115 USP17L19D6RCP7 530 aa8.92□□□□□ -0.98
SDCBP-206ENST00000519115 USP17L20D6RJB6 530 aa8.92□□□□□ -0.98
SDCBP-206ENST00000519115 ORC4O43929 436 aa8.92□□□□□ -0.98
SDCBP-206ENST00000519115 PSMC4P43686 418 aa8.92□□□□□ -0.98
SDCBP-206ENST00000519115 GCLCP48506 637 aaPredicted RBP8.92□□□□□ -0.98
SDCBP-206ENST00000519115 USP17L24Q0WX57 530 aa8.92□□□□□ -0.98
SDCBP-206ENST00000519115 FAM110CQ1W6H9 321 aa8.92□□□□□ -0.98
SDCBP-206ENST00000519115 AKNAD1Q5T1N1 836 aa8.92□□□□□ -0.98
SDCBP-206ENST00000519115 CREB3L3Q68CJ9 461 aa8.92□□□□□ -0.98
SDCBP-206ENST00000519115 POTEEQ6S8J3 1075 aa8.92□□□□□ -0.98
SDCBP-206ENST00000519115 MFSD6Q6ZSS7 791 aa8.92□□□□□ -0.98
SDCBP-206ENST00000519115 NEDD1Q8NHV4 660 aa8.92□□□□□ -0.98
SDCBP-206ENST00000519115 NKX2-3Q8TAU0 364 aa8.92□□□□□ -0.98
SDCBP-206ENST00000519115 STAG1Q8WVM7 1258 aa8.92□□□□□ -0.98
SDCBP-206ENST00000519115 TRIM47Q96LD4 638 aa8.92□□□□□ -0.98
SDCBP-206ENST00000519115 NUP88Q99567 741 aaPredicted RBP8.92□□□□□ -0.98
SDCBP-206ENST00000519115 GOPCQ9HD26 462 aa8.92□□□□□ -0.98
SDCBP-206ENST00000519115 TXNRD2Q9NNW7 524 aa8.92□□□□□ -0.98
SDCBP-206ENST00000519115 MTMR4Q9NYA4 1195 aa8.92□□□□□ -0.98
SDCBP-206ENST00000519115 NYAP2Q9P242 653 aa8.92□□□□□ -0.98
SDCBP-206ENST00000519115 CLIP2Q9UDT6 1046 aa8.92□□□□□ -0.98
SDCBP-206ENST00000519115 RBM8AQ9Y5S9 174 aaKnown RBP8.92□□□□□ -0.98
SDCBP-206ENST00000519115 SNX14Q9Y5W7 946 aa8.92□□□□□ -0.98
SDCBP-206ENST00000519115 CYP46A1Q9Y6A2 500 aa8.92□□□□□ -0.98
SDCBP-206ENST00000519115 ZNFX1Q9P2E3 1918 aaKnown RBP8.92□□□□□ -0.98
SDCBP-206ENST00000519115 SPDYE16A6NNV3 312 aaPredicted RBP8.91□□□□□ -0.98
SDCBP-206ENST00000519115 ZNF213O14771 459 aa8.91□□□□□ -0.98
SDCBP-206ENST00000519115 SLC27A2O14975 620 aa8.91□□□□□ -0.98
SDCBP-206ENST00000519115 WDR46O15213 610 aaKnown RBP8.91□□□□□ -0.98
SDCBP-206ENST00000519115 FLOT1O75955 427 aa8.91□□□□□ -0.98
SDCBP-206ENST00000519115 FMNL1O95466 1100 aaPredicted RBP8.91□□□□□ -0.98
SDCBP-206ENST00000519115 TTLL1O95922 423 aa8.91□□□□□ -0.98
SDCBP-206ENST00000519115 NDUFB10O96000 172 aa8.91□□□□□ -0.98
SDCBP-206ENST00000519115 FGRP09769 529 aa8.91□□□□□ -0.98
SDCBP-206ENST00000519115 VASPP50552 380 aaPredicted RBP8.91□□□□□ -0.98
SDCBP-206ENST00000519115 IMMTQ16891 758 aaKnown RBP8.91□□□□□ -0.98
SDCBP-206ENST00000519115 FAM83BQ5T0W9 1011 aa8.91□□□□□ -0.98
SDCBP-206ENST00000519115 FBXO46Q6PJ61 603 aaPredicted RBP8.91□□□□□ -0.98
SDCBP-206ENST00000519115 CATSPERGQ6ZRH7 1159 aa8.91□□□□□ -0.98
SDCBP-206ENST00000519115 RUFY3Q7L099 469 aa8.91□□□□□ -0.98
SDCBP-206ENST00000519115 RASGRP2Q7LDG7 609 aa8.91□□□□□ -0.98
SDCBP-206ENST00000519115 HSCBQ8IWL3 235 aa8.91□□□□□ -0.98
SDCBP-206ENST00000519115 LPAR1Q92633 364 aa8.91□□□□□ -0.98
SDCBP-206ENST00000519115 INTS4Q96HW7 963 aaKnown RBP8.91□□□□□ -0.98
SDCBP-206ENST00000519115 ZSCAN31Q96LW9 406 aaPredicted RBP8.91□□□□□ -0.98
SDCBP-206ENST00000519115 CWC22Q9HCG8 908 aaKnown RBP8.91□□□□□ -0.98
SDCBP-206ENST00000519115 IL17RBQ9NRM6 502 aa8.91□□□□□ -0.98
SDCBP-206ENST00000519115 FBXO28Q9NVF7 368 aa8.91□□□□□ -0.98
SDCBP-206ENST00000519115 ISY1Q9ULR0 285 aaKnown RBP8.91□□□□□ -0.98
SDCBP-206ENST00000519115 STX8Q9UNK0 236 aa8.91□□□□□ -0.98
SDCBP-206ENST00000519115 MTMR7Q9Y216 660 aa8.91□□□□□ -0.98
SDCBP-206ENST00000519115 MYH6P13533 1939 aa8.91□□□□□ -0.98
SDCBP-206ENST00000519115 SMCHD1A6NHR9 2005 aa8.9□□□□□ -0.98
SDCBP-206ENST00000519115 B4E1Z4 1266 aa8.9□□□□□ -0.98
SDCBP-206ENST00000519115 K7ELQ4 463 aaPredicted RBP8.9□□□□□ -0.98
SDCBP-206ENST00000519115 TNPO2O14787 897 aaKnown RBP8.9□□□□□ -0.98
SDCBP-206ENST00000519115 KDM4AO75164 1064 aa8.9□□□□□ -0.98
SDCBP-206ENST00000519115 NEK4P51957 841 aa8.9□□□□□ -0.98
SDCBP-206ENST00000519115 FCGRTP55899 365 aa8.9□□□□□ -0.98
SDCBP-206ENST00000519115 ERVK-9P63128 1117 aa8.9□□□□□ -0.98
SDCBP-206ENST00000519115 ERVK-24P63145 666 aa8.9□□□□□ -0.98
SDCBP-206ENST00000519115 RGS22Q8NE09 1264 aa8.9□□□□□ -0.98
SDCBP-206ENST00000519115 ATG4CQ96DT6 458 aa8.9□□□□□ -0.98
SDCBP-206ENST00000519115 ZKSCAN3Q9BRR0 538 aa8.9□□□□□ -0.98
SDCBP-206ENST00000519115 AGXT2Q9BYV1 514 aa8.9□□□□□ -0.98
SDCBP-206ENST00000519115 RNF41Q9H4P4 317 aaPredicted RBP8.9□□□□□ -0.98
SDCBP-206ENST00000519115 CNNM2Q9H8M5 875 aa8.9□□□□□ -0.98
SDCBP-206ENST00000519115 SH2B1Q9NRF2 756 aaPredicted RBP8.9□□□□□ -0.98
SDCBP-206ENST00000519115 RBPJLQ9UBG7 517 aa8.9□□□□□ -0.98
SDCBP-206ENST00000519115 MORF4L1Q9UBU8 362 aa8.9□□□□□ -0.98
SDCBP-206ENST00000519115 HPS5Q9UPZ3 1129 aa8.9□□□□□ -0.98
SDCBP-206ENST00000519115 PTPN22Q9Y2R2 807 aa8.9□□□□□ -0.98
SDCBP-206ENST00000519115 PTCH2Q9Y6C5 1203 aa8.9□□□□□ -0.98
SDCBP-206ENST00000519115 TAF6LQ9Y6J9 622 aa8.9□□□□□ -0.98
SDCBP-206ENST00000519115 MYPNQ86TC9 1320 aa8.89□□□□□ -0.99
SDCBP-206ENST00000519115 CCDC85CA6NKD9 419 aa8.89□□□□□ -0.99
SDCBP-206ENST00000519115 F5H6K3 240 aa8.89□□□□□ -0.99
SDCBP-206ENST00000519115 CNMDO75829 334 aa8.89□□□□□ -0.99
SDCBP-206ENST00000519115 EVCP57679 992 aa8.89□□□□□ -0.99
SDCBP-206ENST00000519115 PRKCZQ05513 592 aa8.89□□□□□ -0.99
SDCBP-206ENST00000519115 KLRC3Q07444 240 aa8.89□□□□□ -0.99
SDCBP-206ENST00000519115 ARHGEF6Q15052 776 aa8.89□□□□□ -0.99
SDCBP-206ENST00000519115 PKN2Q16513 984 aaKnown RBP8.89□□□□□ -0.99
SDCBP-206ENST00000519115 Q3C1V9 767 aa8.89□□□□□ -0.99
SDCBP-206ENST00000519115 WDR78Q5VTH9 848 aa8.89□□□□□ -0.99
SDCBP-206ENST00000519115 DHX32Q7L7V1 743 aaKnown RBP8.89□□□□□ -0.99
SDCBP-206ENST00000519115 RASEFQ8IZ41 740 aa8.89□□□□□ -0.99
SDCBP-206ENST00000519115 GPRC5AQ8NFJ5 357 aa8.89□□□□□ -0.99
SDCBP-206ENST00000519115 ESR2Q92731 530 aa8.89□□□□□ -0.99
SDCBP-206ENST00000519115 TTC14Q96N46 770 aa8.89□□□□□ -0.99
SDCBP-206ENST00000519115 NEK1Q96PY6 1258 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms