RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 FGRP09769 529 aa18.72■□□□□ 0.59
PCDHGA11-202ENST00000518882 MCM7P33993 719 aa18.72■□□□□ 0.59
PCDHGA11-202ENST00000518882 MAPK8IP1Q9UQF2 711 aa18.72■□□□□ 0.59
PCDHGA11-202ENST00000518882 CASZ1Q86V15 1759 aa18.72■□□□□ 0.59
PCDHGA11-202ENST00000518882 USP5P45974 858 aa18.72■□□□□ 0.59
PCDHGA11-202ENST00000518882 PAK1Q13153 545 aa18.72■□□□□ 0.59
PCDHGA11-202ENST00000518882 TCP11X2Q5H9J9 407 aa18.72■□□□□ 0.59
PCDHGA11-202ENST00000518882 TMTC1Q8IUR5 882 aa18.72■□□□□ 0.59
PCDHGA11-202ENST00000518882 HNRNPLLQ8WVV9 542 aaKnown RBP18.72■□□□□ 0.59
PCDHGA11-202ENST00000518882 NUP88Q99567 741 aaPredicted RBP18.72■□□□□ 0.59
PCDHGA11-202ENST00000518882 BRIP1Q9BX63 1249 aa18.72■□□□□ 0.59
PCDHGA11-202ENST00000518882 SUGCTQ9HAC7 445 aa18.72■□□□□ 0.59
PCDHGA11-202ENST00000518882 NIP7Q9Y221 180 aaKnown RBP eCLIP18.72■□□□□ 0.59
PCDHGA11-202ENST00000518882 SCN7AQ01118 1682 aa18.72■□□□□ 0.59
PCDHGA11-202ENST00000518882 DDAH1O94760 285 aa18.71■□□□□ 0.59
PCDHGA11-202ENST00000518882 CRKLP46109 303 aaKnown RBP18.71■□□□□ 0.59
PCDHGA11-202ENST00000518882 NELFBQ8WX92 580 aa18.71■□□□□ 0.59
PCDHGA11-202ENST00000518882 CCDC87Q9NVE4 849 aa18.71■□□□□ 0.59
PCDHGA11-202ENST00000518882 GDAQ9Y2T3 454 aa18.71■□□□□ 0.59
PCDHGA11-202ENST00000518882 KCNJ18B7U540 433 aa18.71■□□□□ 0.59
PCDHGA11-202ENST00000518882 USP17L12C9JPN9 530 aa18.71■□□□□ 0.59
PCDHGA11-202ENST00000518882 USP17L21D6R901 530 aa18.71■□□□□ 0.59
PCDHGA11-202ENST00000518882 GTPBP6O43824 516 aaPredicted RBP18.71■□□□□ 0.59
PCDHGA11-202ENST00000518882 RHOXF2BP0C7M4 288 aa18.71■□□□□ 0.59
PCDHGA11-202ENST00000518882 CALM1P0DP23 149 aa18.71■□□□□ 0.59
PCDHGA11-202ENST00000518882 CALM2P0DP24 149 aa18.71■□□□□ 0.59
PCDHGA11-202ENST00000518882 CALM3P0DP25 149 aa18.71■□□□□ 0.59
PCDHGA11-202ENST00000518882 KCNJ12Q14500 433 aa18.71■□□□□ 0.59
PCDHGA11-202ENST00000518882 CHP1Q99653 195 aa18.71■□□□□ 0.59
PCDHGA11-202ENST00000518882 NAPGQ99747 312 aaPredicted RBP18.71■□□□□ 0.59
PCDHGA11-202ENST00000518882 SLF1Q9BQI6 1058 aa18.71■□□□□ 0.59
PCDHGA11-202ENST00000518882 RHOXF2Q9BQY4 288 aa18.71■□□□□ 0.59
PCDHGA11-202ENST00000518882 IRX5P78411 483 aaPredicted RBP18.7■□□□□ 0.58
PCDHGA11-202ENST00000518882 MCM6Q14566 821 aa18.7■□□□□ 0.58
PCDHGA11-202ENST00000518882 PARP10Q53GL7 1025 aa18.7■□□□□ 0.58
PCDHGA11-202ENST00000518882 FAM47AQ5JRC9 791 aa18.7■□□□□ 0.58
PCDHGA11-202ENST00000518882 CYP26C1Q6V0L0 522 aa18.7■□□□□ 0.58
PCDHGA11-202ENST00000518882 TXLNBQ8N3L3 684 aa18.7■□□□□ 0.58
PCDHGA11-202ENST00000518882 PDE11AQ9HCR9 933 aa18.7■□□□□ 0.58
PCDHGA11-202ENST00000518882 ABCB6Q9NP58 842 aa18.7■□□□□ 0.58
PCDHGA11-202ENST00000518882 ADAM21Q9UKJ8 722 aa18.7■□□□□ 0.58
PCDHGA11-202ENST00000518882 LAMB1P07942 1786 aa18.7■□□□□ 0.58
PCDHGA11-202ENST00000518882 EXOC5O00471 708 aa18.7■□□□□ 0.58
PCDHGA11-202ENST00000518882 RPN1P04843 607 aaKnown RBP18.7■□□□□ 0.58
PCDHGA11-202ENST00000518882 SCG2P13521 617 aa18.7■□□□□ 0.58
PCDHGA11-202ENST00000518882 KRT9P35527 623 aa18.7■□□□□ 0.58
PCDHGA11-202ENST00000518882 NLRP5P59047 1200 aa18.7■□□□□ 0.58
PCDHGA11-202ENST00000518882 ZNF658Q5TYW1 1059 aaPredicted RBP18.7■□□□□ 0.58
PCDHGA11-202ENST00000518882 WWC2Q6AWC2 1192 aa18.7■□□□□ 0.58
PCDHGA11-202ENST00000518882 TRIM10Q9UDY6 481 aa18.7■□□□□ 0.58
PCDHGA11-202ENST00000518882 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.7■□□□□ 0.58
PCDHGA11-202ENST00000518882 REXO2Q9Y3B8 237 aaKnown RBP18.7■□□□□ 0.58
PCDHGA11-202ENST00000518882 PRCPP42785 496 aa18.69■□□□□ 0.58
PCDHGA11-202ENST00000518882 VSNL1P62760 191 aa18.69■□□□□ 0.58
PCDHGA11-202ENST00000518882 C3orf67Q6ZVT6 689 aa18.69■□□□□ 0.58
PCDHGA11-202ENST00000518882 IRF2BP1Q8IU81 584 aa18.69■□□□□ 0.58
PCDHGA11-202ENST00000518882 L1RE1Q9UN81 338 aa18.69■□□□□ 0.58
PCDHGA11-202ENST00000518882 TRIM49BA6NDI0 452 aa18.69■□□□□ 0.58
PCDHGA11-202ENST00000518882 TUBB2AQ13885 445 aa18.69■□□□□ 0.58
PCDHGA11-202ENST00000518882 NOA1Q8NC60 698 aaKnown RBP18.69■□□□□ 0.58
PCDHGA11-202ENST00000518882 CTCFLQ8NI51 663 aaPredicted RBP18.69■□□□□ 0.58
PCDHGA11-202ENST00000518882 TRERF1Q96PN7 1200 aa18.69■□□□□ 0.58
PCDHGA11-202ENST00000518882 TUBB2BQ9BVA1 445 aa18.69■□□□□ 0.58
PCDHGA11-202ENST00000518882 FAM205AQ6ZU69 1335 aa18.68■□□□□ 0.58
PCDHGA11-202ENST00000518882 TULP2O00295 520 aa18.68■□□□□ 0.58
PCDHGA11-202ENST00000518882 AMPD2Q01433 879 aa18.68■□□□□ 0.58
PCDHGA11-202ENST00000518882 SPAG1Q07617 926 aa18.68■□□□□ 0.58
PCDHGA11-202ENST00000518882 C4orf32Q8N8J7 132 aa18.68■□□□□ 0.58
PCDHGA11-202ENST00000518882 POTEB2H3BUK9 544 aa18.67■□□□□ 0.58
PCDHGA11-202ENST00000518882 N4BP1O75113 896 aaKnown RBP18.67■□□□□ 0.58
PCDHGA11-202ENST00000518882 ATP6V1AP38606 617 aa18.67■□□□□ 0.58
PCDHGA11-202ENST00000518882 UBXN1Q04323 297 aa18.67■□□□□ 0.58
PCDHGA11-202ENST00000518882 PFKFB3Q16875 520 aaPredicted RBP18.67■□□□□ 0.58
PCDHGA11-202ENST00000518882 NCAPH2Q6IBW4 605 aa18.67■□□□□ 0.58
PCDHGA11-202ENST00000518882 GNL3LQ9NVN8 582 aaKnown RBP18.67■□□□□ 0.58
PCDHGA11-202ENST00000518882 A0A0G2JS52 829 aa18.67■□□□□ 0.58
PCDHGA11-202ENST00000518882 CTAGE15A4D2H0 777 aa18.67■□□□□ 0.58
PCDHGA11-202ENST00000518882 CTAGE8P0CG41 777 aa18.67■□□□□ 0.58
PCDHGA11-202ENST00000518882 CYP2D6P10635 497 aa18.67■□□□□ 0.58
PCDHGA11-202ENST00000518882 TRAPPC10P48553 1259 aa18.67■□□□□ 0.58
PCDHGA11-202ENST00000518882 PMS1P54277 932 aaKnown RBP18.67■□□□□ 0.58
PCDHGA11-202ENST00000518882 HDXQ7Z353 690 aa18.67■□□□□ 0.58
PCDHGA11-202ENST00000518882 CTAGE6Q86UF2 777 aa18.67■□□□□ 0.58
PCDHGA11-202ENST00000518882 CTAGE4Q8IX94 777 aa18.67■□□□□ 0.58
PCDHGA11-202ENST00000518882 KIAA1551Q9HCM1 1747 aa18.67■□□□□ 0.58
PCDHGA11-202ENST00000518882 WNK3Q9BYP7 1800 aa18.66■□□□□ 0.58
PCDHGA11-202ENST00000518882 RREB1Q92766 1687 aa18.66■□□□□ 0.58
PCDHGA11-202ENST00000518882 TTC26A0AVF1 554 aa18.66■□□□□ 0.58
PCDHGA11-202ENST00000518882 CAPN2P17655 700 aa18.66■□□□□ 0.58
PCDHGA11-202ENST00000518882 GPS2Q13227 327 aa18.66■□□□□ 0.58
PCDHGA11-202ENST00000518882 ITPK1Q13572 414 aa18.66■□□□□ 0.58
PCDHGA11-202ENST00000518882 TRIM14Q14142 442 aa18.66■□□□□ 0.58
PCDHGA11-202ENST00000518882 WHAMMP3Q1A5X7 153 aa18.66■□□□□ 0.58
PCDHGA11-202ENST00000518882 EXOC4Q96A65 974 aa18.66■□□□□ 0.58
PCDHGA11-202ENST00000518882 FAM84BQ96KN1 310 aaPredicted RBP18.66■□□□□ 0.58
PCDHGA11-202ENST00000518882 MYO1AQ9UBC5 1043 aa18.66■□□□□ 0.58
PCDHGA11-202ENST00000518882 TFR2Q9UP52 801 aa18.66■□□□□ 0.58
PCDHGA11-202ENST00000518882 ORC4O43929 436 aa18.66■□□□□ 0.58
PCDHGA11-202ENST00000518882 NDUFA10O95299 355 aa18.66■□□□□ 0.58
PCDHGA11-202ENST00000518882 PARP1P09874 1014 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms