RNA–Protein interactions for RNA: ENST00000518528.1

PVT1-207, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 624 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-207ENST00000518528 MIGA1Q8NAN2 632 aa10.83□□□□□ -0.68
PVT1-207ENST00000518528 PCSK9Q8NBP7 692 aaKnown RBP10.83□□□□□ -0.68
PVT1-207ENST00000518528 ZNF512BQ96KM6 892 aaPredicted RBP10.83□□□□□ -0.68
PVT1-207ENST00000518528 ARHGEF10LQ9HCE6 1279 aa10.83□□□□□ -0.68
PVT1-207ENST00000518528 TBX21Q9UL17 535 aa10.83□□□□□ -0.68
PVT1-207ENST00000518528 FAM184BQ9ULE4 1060 aa10.83□□□□□ -0.68
PVT1-207ENST00000518528 LTBP2Q14767 1821 aa10.83□□□□□ -0.68
PVT1-207ENST00000518528 ROBO3Q96MS0 1386 aa10.82□□□□□ -0.68
PVT1-207ENST00000518528 GRXCR1A8MXD5 290 aa10.82□□□□□ -0.68
PVT1-207ENST00000518528 GNAI2P04899 355 aa10.82□□□□□ -0.68
PVT1-207ENST00000518528 SHMT1P34896 483 aa10.82□□□□□ -0.68
PVT1-207ENST00000518528 ZAP70P43403 619 aa10.82□□□□□ -0.68
PVT1-207ENST00000518528 ADGRE1Q14246 886 aa10.82□□□□□ -0.68
PVT1-207ENST00000518528 KCNA10Q16322 511 aa10.82□□□□□ -0.68
PVT1-207ENST00000518528 TMEM31Q5JXX7 168 aa10.82□□□□□ -0.68
PVT1-207ENST00000518528 RASIP1Q5U651 963 aa10.82□□□□□ -0.68
PVT1-207ENST00000518528 TMEM179Q6ZVK1 233 aa10.82□□□□□ -0.68
PVT1-207ENST00000518528 ZNF365Q70YC5 407 aa10.82□□□□□ -0.68
PVT1-207ENST00000518528 MICALL1Q8N3F8 863 aa10.82□□□□□ -0.68
PVT1-207ENST00000518528 HERVK_113Q902F9 699 aa10.82□□□□□ -0.68
PVT1-207ENST00000518528 ATG4CQ96DT6 458 aa10.82□□□□□ -0.68
PVT1-207ENST00000518528 DNAH12Q6ZR08 3092 aa10.81□□□□□ -0.68
PVT1-207ENST00000518528 A0A0U1RQG5 324 aaPredicted RBP10.81□□□□□ -0.68
PVT1-207ENST00000518528 GTPBP6O43824 516 aaPredicted RBP10.81□□□□□ -0.68
PVT1-207ENST00000518528 ADAMTS4O75173 837 aa10.81□□□□□ -0.68
PVT1-207ENST00000518528 FGBP02675 491 aa10.81□□□□□ -0.68
PVT1-207ENST00000518528 PGK2P07205 417 aa10.81□□□□□ -0.68
PVT1-207ENST00000518528 BMP1P13497 986 aa10.81□□□□□ -0.68
PVT1-207ENST00000518528 CSF2RAP15509 400 aa10.81□□□□□ -0.68
PVT1-207ENST00000518528 SLFN5Q08AF3 891 aa10.81□□□□□ -0.68
PVT1-207ENST00000518528 TNNI3KQ59H18 835 aa10.81□□□□□ -0.68
PVT1-207ENST00000518528 DBNDD2Q9BQY9 259 aa10.81□□□□□ -0.68
PVT1-207ENST00000518528 NKX2-4Q9H2Z4 354 aa10.81□□□□□ -0.68
PVT1-207ENST00000518528 IL23AQ9NPF7 189 aa10.81□□□□□ -0.68
PVT1-207ENST00000518528 PIH1D3Q9NQM4 214 aaKnown RBP10.81□□□□□ -0.68
PVT1-207ENST00000518528 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.81□□□□□ -0.68
PVT1-207ENST00000518528 FPGT-TNNI3KV9GXZ4 949 aa10.81□□□□□ -0.68
PVT1-207ENST00000518528 ATAD5Q96QE3 1844 aa10.81□□□□□ -0.68
PVT1-207ENST00000518528 WDR46O15213 610 aaKnown RBP10.8□□□□□ -0.68
PVT1-207ENST00000518528 DUSP11O75319 330 aaKnown RBP10.8□□□□□ -0.68
PVT1-207ENST00000518528 ZNF865P0CJ78 1059 aaPredicted RBP10.8□□□□□ -0.68
PVT1-207ENST00000518528 ACRP10323 421 aa10.8□□□□□ -0.68
PVT1-207ENST00000518528 TAL1P17542 331 aaPredicted RBP10.8□□□□□ -0.68
PVT1-207ENST00000518528 GUCY1A2P33402 732 aa10.8□□□□□ -0.68
PVT1-207ENST00000518528 STAT3P40763 770 aa10.8□□□□□ -0.68
PVT1-207ENST00000518528 PLCD1P51178 756 aa10.8□□□□□ -0.68
PVT1-207ENST00000518528 TMEM132BQ14DG7 1078 aa10.8□□□□□ -0.68
PVT1-207ENST00000518528 ZNF792Q3KQV3 632 aa10.8□□□□□ -0.68
PVT1-207ENST00000518528 PPP2R2DQ66LE6 453 aa10.8□□□□□ -0.68
PVT1-207ENST00000518528 C16orf59Q7L2K0 433 aa10.8□□□□□ -0.68
PVT1-207ENST00000518528 RIOX2Q8IUF8 465 aa10.8□□□□□ -0.68
PVT1-207ENST00000518528 MAGEB6Q8N7X4 407 aa10.8□□□□□ -0.68
PVT1-207ENST00000518528 KLHDC9Q8NEP7 349 aa10.8□□□□□ -0.68
PVT1-207ENST00000518528 NECAB3Q96P71 396 aaPredicted RBP10.8□□□□□ -0.68
PVT1-207ENST00000518528 CRNKL1Q9BZJ0 848 aaKnown RBP10.8□□□□□ -0.68
PVT1-207ENST00000518528 SWAP70Q9UH65 585 aa10.8□□□□□ -0.68
PVT1-207ENST00000518528 ZHX1Q9UKY1 873 aaPredicted RBP10.8□□□□□ -0.68
PVT1-207ENST00000518528 SYNRGQ9UMZ2 1314 aa10.8□□□□□ -0.68
PVT1-207ENST00000518528 RLFQ13129 1914 aa10.8□□□□□ -0.68
PVT1-207ENST00000518528 EYSQ5T1H1 3165 aa10.79□□□□□ -0.68
PVT1-207ENST00000518528 A0A1W2PRG0 241 aa10.79□□□□□ -0.68
PVT1-207ENST00000518528 ARVCFO00192 962 aa10.79□□□□□ -0.68
PVT1-207ENST00000518528 ERC2O15083 957 aa10.79□□□□□ -0.68
PVT1-207ENST00000518528 IPO8O15397 1037 aaKnown RBP10.79□□□□□ -0.68
PVT1-207ENST00000518528 C6orf222P0C671 652 aaPredicted RBP10.79□□□□□ -0.68
PVT1-207ENST00000518528 CST5P28325 142 aaPredicted RBP10.79□□□□□ -0.68
PVT1-207ENST00000518528 CDK7P50613 346 aa10.79□□□□□ -0.68
PVT1-207ENST00000518528 ICA1Q05084 483 aa10.79□□□□□ -0.68
PVT1-207ENST00000518528 RPUSD2Q8IZ73 545 aaKnown RBP10.79□□□□□ -0.68
PVT1-207ENST00000518528 SPICE1Q8N0Z3 855 aa10.79□□□□□ -0.68
PVT1-207ENST00000518528 ARHGAP45Q92619 1136 aa10.79□□□□□ -0.68
PVT1-207ENST00000518528 DDX11Q96FC9 970 aa10.79□□□□□ -0.68
PVT1-207ENST00000518528 CDCA7LQ96GN5 454 aa10.79□□□□□ -0.68
PVT1-207ENST00000518528 LRFN3Q9BTN0 628 aa10.79□□□□□ -0.68
PVT1-207ENST00000518528 PPP1R12CQ9BZL4 782 aa10.79□□□□□ -0.68
PVT1-207ENST00000518528 VCPKMTQ9H867 229 aa10.79□□□□□ -0.68
PVT1-207ENST00000518528 MCM9Q9NXL9 1143 aa10.79□□□□□ -0.68
PVT1-207ENST00000518528 COG5Q9UP83 839 aa10.79□□□□□ -0.68
PVT1-207ENST00000518528 TMX2Q9Y320 296 aa10.79□□□□□ -0.68
PVT1-207ENST00000518528 MYO9BQ13459 2157 aa10.79□□□□□ -0.68
PVT1-207ENST00000518528 MAGEB6P1A0A0J9YX57 407 aa10.78□□□□□ -0.68
PVT1-207ENST00000518528 ASGR1P07306 291 aa10.78□□□□□ -0.68
PVT1-207ENST00000518528 GABPAQ06546 454 aa10.78□□□□□ -0.68
PVT1-207ENST00000518528 GNASQ5JWF2 1037 aa10.78□□□□□ -0.68
PVT1-207ENST00000518528 LENG1Q96BZ8 264 aaPredicted RBP10.78□□□□□ -0.68
PVT1-207ENST00000518528 CCDC17Q96LX7 622 aa10.78□□□□□ -0.68
PVT1-207ENST00000518528 SEZ6LQ9BYH1 1024 aa10.78□□□□□ -0.68
PVT1-207ENST00000518528 CTDP1Q9Y5B0 961 aaPredicted RBP10.78□□□□□ -0.68
PVT1-207ENST00000518528 PCDHA11Q9Y5I1 949 aa10.78□□□□□ -0.68
PVT1-207ENST00000518528 SLC4A7Q9Y6M7 1214 aa10.78□□□□□ -0.68
PVT1-207ENST00000518528 FRMPD3Q5JV73 1810 aa10.78□□□□□ -0.68
PVT1-207ENST00000518528 ZNF236Q9UL36 1845 aa10.77□□□□□ -0.68
PVT1-207ENST00000518528 PNMA6EA0A0J9YXQ4 647 aa10.77□□□□□ -0.69
PVT1-207ENST00000518528 VWA5AO00534 786 aa10.77□□□□□ -0.69
PVT1-207ENST00000518528 CABYRO75952 493 aa10.77□□□□□ -0.69
PVT1-207ENST00000518528 CYP2C18P33260 490 aa10.77□□□□□ -0.69
PVT1-207ENST00000518528 TFF2Q03403 129 aa10.77□□□□□ -0.69
PVT1-207ENST00000518528 CCSAPQ6IQ19 270 aaPredicted RBP10.77□□□□□ -0.69
PVT1-207ENST00000518528 AMOTL1Q8IY63 956 aa10.77□□□□□ -0.69
PVT1-207ENST00000518528 HIPK3Q9H422 1215 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms