RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 PRPF38AQ8NAV1 312 aaKnown RBP4.66□□□□□ -1.66
RNU6-840P-201ENST00000517275 C1orf159Q96HA4 380 aa4.66□□□□□ -1.66
RNU6-840P-201ENST00000517275 FAM46AQ96IP4 442 aaKnown RBP4.66□□□□□ -1.66
RNU6-840P-201ENST00000517275 CCDC140Q96MF4 163 aa4.66□□□□□ -1.66
RNU6-840P-201ENST00000517275 CDC6Q99741 560 aa4.66□□□□□ -1.66
RNU6-840P-201ENST00000517275 ORAI3Q9BRQ5 295 aa4.66□□□□□ -1.66
RNU6-840P-201ENST00000517275 PCGF6Q9BYE7 350 aa4.66□□□□□ -1.66
RNU6-840P-201ENST00000517275 CEP41Q9BYV8 373 aa4.66□□□□□ -1.66
RNU6-840P-201ENST00000517275 MKRN2Q9H000 416 aaKnown RBP4.66□□□□□ -1.66
RNU6-840P-201ENST00000517275 CGGBP1Q9UFW8 167 aaPredicted RBP4.66□□□□□ -1.66
RNU6-840P-201ENST00000517275 SFMBT1Q9UHJ3 866 aa4.66□□□□□ -1.66
RNU6-840P-201ENST00000517275 MCM8Q9UJA3 840 aa4.66□□□□□ -1.66
RNU6-840P-201ENST00000517275 ZNF451Q9Y4E5 1061 aa4.66□□□□□ -1.66
RNU6-840P-201ENST00000517275 IRS4O14654 1257 aaPredicted RBP4.65□□□□□ -1.67
RNU6-840P-201ENST00000517275 DNAJC8O75937 253 aaPredicted RBP4.65□□□□□ -1.67
RNU6-840P-201ENST00000517275 SLITRK5O94991 958 aa4.65□□□□□ -1.67
RNU6-840P-201ENST00000517275 PARNO95453 639 aaKnown RBP4.65□□□□□ -1.67
RNU6-840P-201ENST00000517275 MYCLP1P12525 358 aaPredicted RBP4.65□□□□□ -1.67
RNU6-840P-201ENST00000517275 L1CAMP32004 1257 aa4.65□□□□□ -1.67
RNU6-840P-201ENST00000517275 PREPP48147 710 aa4.65□□□□□ -1.67
RNU6-840P-201ENST00000517275 GFRA1P56159 465 aa4.65□□□□□ -1.67
RNU6-840P-201ENST00000517275 NBPF9Q3BBW0 867 aa4.65□□□□□ -1.67
RNU6-840P-201ENST00000517275 NSMFQ6X4W1 530 aa4.65□□□□□ -1.67
RNU6-840P-201ENST00000517275 DYMQ7RTS9 669 aa4.65□□□□□ -1.67
RNU6-840P-201ENST00000517275 MAMDC2Q7Z304 686 aaPredicted RBP4.65□□□□□ -1.67
RNU6-840P-201ENST00000517275 NECAB2Q7Z6G3 386 aa4.65□□□□□ -1.67
RNU6-840P-201ENST00000517275 LRRTM3Q86VH5 581 aa4.65□□□□□ -1.67
RNU6-840P-201ENST00000517275 ANKLE2Q86XL3 938 aa4.65□□□□□ -1.67
RNU6-840P-201ENST00000517275 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.65□□□□□ -1.67
RNU6-840P-201ENST00000517275 LRRN4CLQ8ND94 238 aa4.65□□□□□ -1.67
RNU6-840P-201ENST00000517275 RELTQ969Z4 430 aa4.65□□□□□ -1.67
RNU6-840P-201ENST00000517275 LENG1Q96BZ8 264 aaPredicted RBP4.65□□□□□ -1.67
RNU6-840P-201ENST00000517275 CLUHP3Q96NS8 147 aa4.65□□□□□ -1.67
RNU6-840P-201ENST00000517275 IPO9Q96P70 1041 aaKnown RBP4.65□□□□□ -1.67
RNU6-840P-201ENST00000517275 TARS2Q9BW92 718 aaKnown RBP4.65□□□□□ -1.67
RNU6-840P-201ENST00000517275 YIPF2Q9BWQ6 316 aa4.65□□□□□ -1.67
RNU6-840P-201ENST00000517275 NKX2-4Q9H2Z4 354 aa4.65□□□□□ -1.67
RNU6-840P-201ENST00000517275 SEMA6CQ9H3T2 930 aa4.65□□□□□ -1.67
RNU6-840P-201ENST00000517275 CWC22Q9HCG8 908 aaKnown RBP4.65□□□□□ -1.67
RNU6-840P-201ENST00000517275 HOMER2Q9NSB8 354 aa4.65□□□□□ -1.67
RNU6-840P-201ENST00000517275 MKL2Q9ULH7 1088 aa4.65□□□□□ -1.67
RNU6-840P-201ENST00000517275 PCDHB12Q9Y5F1 795 aa4.65□□□□□ -1.67
RNU6-840P-201ENST00000517275 NOP56O00567 594 aaKnown RBP4.64□□□□□ -1.67
RNU6-840P-201ENST00000517275 TBX1O43435 398 aa4.64□□□□□ -1.67
RNU6-840P-201ENST00000517275 RAPGEF3O95398 923 aa4.64□□□□□ -1.67
RNU6-840P-201ENST00000517275 EYA4O95677 639 aa4.64□□□□□ -1.67
RNU6-840P-201ENST00000517275 TP53P04637 393 aaPredicted RBP4.64□□□□□ -1.67
RNU6-840P-201ENST00000517275 SPATA31C1P0DKV0 1188 aa4.64□□□□□ -1.67
RNU6-840P-201ENST00000517275 DRD2P14416 443 aa4.64□□□□□ -1.67
RNU6-840P-201ENST00000517275 TRIM28Q13263 835 aaKnown RBP4.64□□□□□ -1.67
RNU6-840P-201ENST00000517275 DHCR24Q15392 516 aa4.64□□□□□ -1.67
RNU6-840P-201ENST00000517275 PRRT3Q5FWE3 981 aa4.64□□□□□ -1.67
RNU6-840P-201ENST00000517275 SLC35F1Q5T1Q4 408 aa4.64□□□□□ -1.67
RNU6-840P-201ENST00000517275 DHX37Q8IY37 1157 aaKnown RBP4.64□□□□□ -1.67
RNU6-840P-201ENST00000517275 WHAMMQ8TF30 809 aa4.64□□□□□ -1.67
RNU6-840P-201ENST00000517275 PLVAPQ9BX97 442 aa4.64□□□□□ -1.67
RNU6-840P-201ENST00000517275 FAM126AQ9BYI3 521 aaPredicted RBP4.64□□□□□ -1.67
RNU6-840P-201ENST00000517275 LRP2BPQ9P2M1 347 aa4.64□□□□□ -1.67
RNU6-840P-201ENST00000517275 DIS3Q9Y2L1 958 aaKnown RBP4.64□□□□□ -1.67
RNU6-840P-201ENST00000517275 PRODHO43272 600 aa4.63□□□□□ -1.67
RNU6-840P-201ENST00000517275 DLX3O60479 287 aa4.63□□□□□ -1.67
RNU6-840P-201ENST00000517275 CPP00450 1065 aa4.63□□□□□ -1.67
RNU6-840P-201ENST00000517275 ASLP04424 464 aa4.63□□□□□ -1.67
RNU6-840P-201ENST00000517275 SDSP20132 328 aa4.63□□□□□ -1.67
RNU6-840P-201ENST00000517275 HOXC12P31275 282 aa4.63□□□□□ -1.67
RNU6-840P-201ENST00000517275 GMPRP36959 345 aa4.63□□□□□ -1.67
RNU6-840P-201ENST00000517275 GRIA2P42262 883 aa4.63□□□□□ -1.67
RNU6-840P-201ENST00000517275 KIR3DL1P43629 444 aa4.63□□□□□ -1.67
RNU6-840P-201ENST00000517275 ZNF445P59923 1031 aa4.63□□□□□ -1.67
RNU6-840P-201ENST00000517275 SNRPNP63162 240 aaKnown RBP4.63□□□□□ -1.67
RNU6-840P-201ENST00000517275 NRG1Q02297 640 aaPredicted RBP4.63□□□□□ -1.67
RNU6-840P-201ENST00000517275 ODR4Q5SWX8 454 aa4.63□□□□□ -1.67
RNU6-840P-201ENST00000517275 ACBD5Q5T8D3 534 aaPredicted RBP4.63□□□□□ -1.67
RNU6-840P-201ENST00000517275 LCE2AQ5TA79 106 aaPredicted RBP4.63□□□□□ -1.67
RNU6-840P-201ENST00000517275 ZNF787Q6DD87 383 aa4.63□□□□□ -1.67
RNU6-840P-201ENST00000517275 GTF2IRD2BQ6EKJ0 949 aa4.63□□□□□ -1.67
RNU6-840P-201ENST00000517275 STYK1Q6J9G0 422 aa4.63□□□□□ -1.67
RNU6-840P-201ENST00000517275 GTF2IRD2Q86UP8 949 aa4.63□□□□□ -1.67
RNU6-840P-201ENST00000517275 FERMT3Q86UX7 667 aa4.63□□□□□ -1.67
RNU6-840P-201ENST00000517275 ALYREFQ86V81 257 aaKnown RBP4.63□□□□□ -1.67
RNU6-840P-201ENST00000517275 DDX42Q86XP3 938 aaKnown RBP eCLIP4.63□□□□□ -1.67
RNU6-840P-201ENST00000517275 JAMLQ86YT9 394 aa4.63□□□□□ -1.67
RNU6-840P-201ENST00000517275 AHI1Q8N157 1196 aa4.63□□□□□ -1.67
RNU6-840P-201ENST00000517275 C12orf50Q8NA57 414 aaPredicted RBP4.63□□□□□ -1.67
RNU6-840P-201ENST00000517275 RIN3Q8TB24 985 aa4.63□□□□□ -1.67
RNU6-840P-201ENST00000517275 SLC7A14Q8TBB6 771 aa4.63□□□□□ -1.67
RNU6-840P-201ENST00000517275 BTN2A2Q8WVV5 523 aa4.63□□□□□ -1.67
RNU6-840P-201ENST00000517275 KCTD13Q8WZ19 329 aa4.63□□□□□ -1.67
RNU6-840P-201ENST00000517275 DDX1Q92499 740 aaKnown RBP4.63□□□□□ -1.67
RNU6-840P-201ENST00000517275 PTPRN2Q92932 1015 aa4.63□□□□□ -1.67
RNU6-840P-201ENST00000517275 ZNF512BQ96KM6 892 aaPredicted RBP4.63□□□□□ -1.67
RNU6-840P-201ENST00000517275 FGD4Q96M96 766 aa4.63□□□□□ -1.67
RNU6-840P-201ENST00000517275 MIPEPQ99797 713 aa4.63□□□□□ -1.67
RNU6-840P-201ENST00000517275 IER2Q9BTL4 223 aa4.63□□□□□ -1.67
RNU6-840P-201ENST00000517275 AKTIPQ9H8T0 292 aa4.63□□□□□ -1.67
RNU6-840P-201ENST00000517275 SLC52A2Q9HAB3 445 aa4.63□□□□□ -1.67
RNU6-840P-201ENST00000517275 PRDM10Q9NQV6 1147 aa4.63□□□□□ -1.67
RNU6-840P-201ENST00000517275 AKT3Q9Y243 479 aa4.63□□□□□ -1.67
RNU6-840P-201ENST00000517275 SIGLEC6O43699 453 aa4.62□□□□□ -1.67
RNU6-840P-201ENST00000517275 RNGTTO60942 597 aaKnown RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms