RNA–Protein interactions for RNA: ENST00000517181.1

RNU1-54P-201, Transcript of RNA, U1 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU1-54P, Length 120 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-54P-201ENST00000517181 USHBP1Q8N6Y0 703 aa4.7□□□□□ -1.66
RNU1-54P-201ENST00000517181 ZNF655Q8N720 491 aaPredicted RBP4.7□□□□□ -1.66
RNU1-54P-201ENST00000517181 ABHD4Q8TB40 342 aa4.7□□□□□ -1.66
RNU1-54P-201ENST00000517181 TMEM82A0PJX8 343 aa4.69□□□□□ -1.66
RNU1-54P-201ENST00000517181 FITM1A5D6W6 292 aa4.69□□□□□ -1.66
RNU1-54P-201ENST00000517181 UNCXA6NJT0 531 aa4.69□□□□□ -1.66
RNU1-54P-201ENST00000517181 SHOXO15266 292 aa4.69□□□□□ -1.66
RNU1-54P-201ENST00000517181 SIGLEC6O43699 453 aa4.69□□□□□ -1.66
RNU1-54P-201ENST00000517181 KRT1P04264 644 aa4.69□□□□□ -1.66
RNU1-54P-201ENST00000517181 MLANAQ16655 118 aa4.69□□□□□ -1.66
RNU1-54P-201ENST00000517181 BBS9Q3SYG4 887 aa4.69□□□□□ -1.66
RNU1-54P-201ENST00000517181 LINC00116Q8NCU8 138 aa4.69□□□□□ -1.66
RNU1-54P-201ENST00000517181 RGS22Q8NE09 1264 aa4.69□□□□□ -1.66
RNU1-54P-201ENST00000517181 RASGRP4Q8TDF6 673 aa4.69□□□□□ -1.66
RNU1-54P-201ENST00000517181 MYLIPQ8WY64 445 aa4.69□□□□□ -1.66
RNU1-54P-201ENST00000517181 SHISA4Q96DD7 197 aa4.69□□□□□ -1.66
RNU1-54P-201ENST00000517181 TCTN2Q96GX1 697 aa4.69□□□□□ -1.66
RNU1-54P-201ENST00000517181 FAM84AQ96KN4 292 aa4.69□□□□□ -1.66
RNU1-54P-201ENST00000517181 SLC6A18Q96N87 628 aa4.69□□□□□ -1.66
RNU1-54P-201ENST00000517181 TM9SF2Q99805 663 aa4.69□□□□□ -1.66
RNU1-54P-201ENST00000517181 PRDM14Q9GZV8 571 aa4.69□□□□□ -1.66
RNU1-54P-201ENST00000517181 PRR13Q9NZ81 148 aa4.69□□□□□ -1.66
RNU1-54P-201ENST00000517181 PRAMEF1O95521 474 aa4.68□□□□□ -1.66
RNU1-54P-201ENST00000517181 EFEMP2O95967 443 aa4.68□□□□□ -1.66
RNU1-54P-201ENST00000517181 TRHRP34981 398 aaPredicted RBP4.68□□□□□ -1.66
RNU1-54P-201ENST00000517181 SOX9P48436 509 aa4.68□□□□□ -1.66
RNU1-54P-201ENST00000517181 HDLBPQ00341 1268 aaKnown RBP4.68□□□□□ -1.66
RNU1-54P-201ENST00000517181 COL9A2Q14055 689 aaPredicted RBP4.68□□□□□ -1.66
RNU1-54P-201ENST00000517181 ZNF654Q8IZM8 581 aa4.68□□□□□ -1.66
RNU1-54P-201ENST00000517181 LILRA2Q8N149 483 aa4.68□□□□□ -1.66
RNU1-54P-201ENST00000517181 DHX38Q92620 1227 aaKnown RBP4.68□□□□□ -1.66
RNU1-54P-201ENST00000517181 ZNF512BQ96KM6 892 aaPredicted RBP4.68□□□□□ -1.66
RNU1-54P-201ENST00000517181 RNF32Q9H0A6 362 aa4.68□□□□□ -1.66
RNU1-54P-201ENST00000517181 SUCOQ9UBS9 1254 aaKnown RBP4.68□□□□□ -1.66
RNU1-54P-201ENST00000517181 ARID1BQ8NFD5 2236 aaPredicted RBP4.68□□□□□ -1.66
RNU1-54P-201ENST00000517181 BTBD11A6QL63 1104 aa4.67□□□□□ -1.66
RNU1-54P-201ENST00000517181 C9IYK1 514 aa4.67□□□□□ -1.66
RNU1-54P-201ENST00000517181 TSPAN15O95858 294 aa4.67□□□□□ -1.66
RNU1-54P-201ENST00000517181 CTSKP43235 329 aa4.67□□□□□ -1.66
RNU1-54P-201ENST00000517181 GJA8P48165 433 aa4.67□□□□□ -1.66
RNU1-54P-201ENST00000517181 CEBPAP49715 358 aaPredicted RBP4.67□□□□□ -1.66
RNU1-54P-201ENST00000517181 PMS1P54277 932 aaKnown RBP4.67□□□□□ -1.66
RNU1-54P-201ENST00000517181 CHRNEQ04844 493 aa4.67□□□□□ -1.66
RNU1-54P-201ENST00000517181 DUSP4Q13115 394 aa4.67□□□□□ -1.66
RNU1-54P-201ENST00000517181 PAK2Q13177 524 aa4.67□□□□□ -1.66
RNU1-54P-201ENST00000517181 ZNF124Q15973 351 aa4.67□□□□□ -1.66
RNU1-54P-201ENST00000517181 CLEC16AQ2KHT3 1053 aa4.67□□□□□ -1.66
RNU1-54P-201ENST00000517181 OXR1Q8N573 874 aa4.67□□□□□ -1.66
RNU1-54P-201ENST00000517181 ANKS4BQ8N8V4 417 aa4.67□□□□□ -1.66
RNU1-54P-201ENST00000517181 MRRFQ96E11 262 aaKnown RBP4.67□□□□□ -1.66
RNU1-54P-201ENST00000517181 SPATA32Q96LK8 384 aa4.67□□□□□ -1.66
RNU1-54P-201ENST00000517181 ASCC2Q9H1I8 757 aaPredicted RBP4.67□□□□□ -1.66
RNU1-54P-201ENST00000517181 C19orf44Q9H6X5 657 aa4.67□□□□□ -1.66
RNU1-54P-201ENST00000517181 TCFL5Q9UL49 500 aa4.67□□□□□ -1.66
RNU1-54P-201ENST00000517181 PPT2Q9UMR5 302 aa4.67□□□□□ -1.66
RNU1-54P-201ENST00000517181 KIR2DL1P43626 348 aaPredicted RBP4.66□□□□□ -1.66
RNU1-54P-201ENST00000517181 KIR2DL2P43627 348 aaPredicted RBP4.66□□□□□ -1.66
RNU1-54P-201ENST00000517181 PCBP3P57721 371 aaKnown RBP4.66□□□□□ -1.66
RNU1-54P-201ENST00000517181 FZD5Q13467 585 aa4.66□□□□□ -1.66
RNU1-54P-201ENST00000517181 AUHQ13825 339 aaKnown RBP4.66□□□□□ -1.66
RNU1-54P-201ENST00000517181 SNX17Q15036 470 aa4.66□□□□□ -1.66
RNU1-54P-201ENST00000517181 ZYXQ15942 572 aaKnown RBP4.66□□□□□ -1.66
RNU1-54P-201ENST00000517181 ANKRD39Q53RE8 183 aa4.66□□□□□ -1.66
RNU1-54P-201ENST00000517181 MPZL3Q6UWV2 235 aa4.66□□□□□ -1.66
RNU1-54P-201ENST00000517181 PPFIBP1Q86W92 1011 aa4.66□□□□□ -1.66
RNU1-54P-201ENST00000517181 LSRQ86X29 649 aaPredicted RBP4.66□□□□□ -1.66
RNU1-54P-201ENST00000517181 NT5DC4Q86YG4 428 aa4.66□□□□□ -1.66
RNU1-54P-201ENST00000517181 KSR1Q8IVT5 923 aa4.66□□□□□ -1.66
RNU1-54P-201ENST00000517181 MAP6Q96JE9 813 aa4.66□□□□□ -1.66
RNU1-54P-201ENST00000517181 DHRS1Q96LJ7 313 aa4.66□□□□□ -1.66
RNU1-54P-201ENST00000517181 FOXP3Q9BZS1 431 aa4.66□□□□□ -1.66
RNU1-54P-201ENST00000517181 CWC22Q9HCG8 908 aaKnown RBP4.66□□□□□ -1.66
RNU1-54P-201ENST00000517181 CHST7Q9NS84 486 aa4.66□□□□□ -1.66
RNU1-54P-201ENST00000517181 GINM1Q9NU53 330 aa4.66□□□□□ -1.66
RNU1-54P-201ENST00000517181 MINPP1Q9UNW1 487 aa4.66□□□□□ -1.66
RNU1-54P-201ENST00000517181 YBX2Q9Y2T7 364 aaKnown RBP4.66□□□□□ -1.66
RNU1-54P-201ENST00000517181 KRTAP4-8A0A0G2JLE6 195 aa4.65□□□□□ -1.67
RNU1-54P-201ENST00000517181 DBX1A6NMT0 343 aa4.65□□□□□ -1.67
RNU1-54P-201ENST00000517181 PSPNO60542 156 aa4.65□□□□□ -1.67
RNU1-54P-201ENST00000517181 ZNF205O95201 554 aa4.65□□□□□ -1.67
RNU1-54P-201ENST00000517181 MED14OSP0DP75 135 aa4.65□□□□□ -1.67
RNU1-54P-201ENST00000517181 GUCY2CP25092 1073 aa4.65□□□□□ -1.67
RNU1-54P-201ENST00000517181 BMP8BP34820 402 aa4.65□□□□□ -1.67
RNU1-54P-201ENST00000517181 CHMP4BP1P59074 171 aa4.65□□□□□ -1.67
RNU1-54P-201ENST00000517181 NLRX1Q86UT6 975 aa4.65□□□□□ -1.67
RNU1-54P-201ENST00000517181 IRF2BP1Q8IU81 584 aa4.65□□□□□ -1.67
RNU1-54P-201ENST00000517181 SPPL2CQ8IUH8 684 aa4.65□□□□□ -1.67
RNU1-54P-201ENST00000517181 C7orf61Q8IZ16 206 aa4.65□□□□□ -1.67
RNU1-54P-201ENST00000517181 FBXO15Q8NCQ5 510 aaPredicted RBP4.65□□□□□ -1.67
RNU1-54P-201ENST00000517181 SMARCC1Q92922 1105 aaPredicted RBP4.65□□□□□ -1.67
RNU1-54P-201ENST00000517181 HHIPL1Q96JK4 782 aa4.65□□□□□ -1.67
RNU1-54P-201ENST00000517181 FERD3LQ96RJ6 166 aa4.65□□□□□ -1.67
RNU1-54P-201ENST00000517181 NSUN3Q9H649 340 aaKnown RBP4.65□□□□□ -1.67
RNU1-54P-201ENST00000517181 PCDHB12Q9Y5F1 795 aa4.65□□□□□ -1.67
RNU1-54P-201ENST00000517181 NRDCO43847 1150 aa4.64□□□□□ -1.67
RNU1-54P-201ENST00000517181 SYPP08247 313 aa4.64□□□□□ -1.67
RNU1-54P-201ENST00000517181 GIPRP48546 466 aa4.64□□□□□ -1.67
RNU1-54P-201ENST00000517181 AXDND1Q5T1B0 1012 aaPredicted RBP4.64□□□□□ -1.67
RNU1-54P-201ENST00000517181 UNC5AQ6ZN44 842 aa4.64□□□□□ -1.67
RNU1-54P-201ENST00000517181 RUFY4Q6ZNE9 571 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms