RNA–Protein interactions for RNA: ENST00000515609.1

TPM3-222, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-222ENST00000515609 CHURC1Q8WUH1 139 aa10.91□□□□□ -0.66
TPM3-222ENST00000515609 L3MBTL3Q96JM7 780 aaPredicted RBP10.91□□□□□ -0.66
TPM3-222ENST00000515609 TMEM39BQ9GZU3 492 aa10.91□□□□□ -0.66
TPM3-222ENST00000515609 RIOX1Q9H6W3 641 aa10.91□□□□□ -0.66
TPM3-222ENST00000515609 DNAJC18Q9H819 358 aa10.91□□□□□ -0.66
TPM3-222ENST00000515609 RTEL1Q9NZ71 1219 aa10.91□□□□□ -0.66
TPM3-222ENST00000515609 ZBTB21Q9ULJ3 1066 aa10.91□□□□□ -0.66
TPM3-222ENST00000515609 PNMA6FA0A0J9YX94 578 aa10.9□□□□□ -0.66
TPM3-222ENST00000515609 F5H6K3 240 aa10.9□□□□□ -0.66
TPM3-222ENST00000515609 USP14P54578 494 aa10.9□□□□□ -0.66
TPM3-222ENST00000515609 KLRC3Q07444 240 aa10.9□□□□□ -0.66
TPM3-222ENST00000515609 STK38Q15208 465 aa10.9□□□□□ -0.66
TPM3-222ENST00000515609 SLFN13Q68D06 897 aa10.9□□□□□ -0.66
TPM3-222ENST00000515609 PNMA8AQ86V59 439 aaPredicted RBP10.9□□□□□ -0.66
TPM3-222ENST00000515609 LRRC47Q8N1G4 583 aaKnown RBP10.9□□□□□ -0.66
TPM3-222ENST00000515609 LPAR1Q92633 364 aa10.9□□□□□ -0.66
TPM3-222ENST00000515609 CCDC34Q96HJ3 373 aa10.9□□□□□ -0.66
TPM3-222ENST00000515609 PHF20Q9BVI0 1012 aa10.9□□□□□ -0.66
TPM3-222ENST00000515609 PICK1Q9NRD5 415 aa10.9□□□□□ -0.66
TPM3-222ENST00000515609 BARHL2Q9NY43 387 aa10.9□□□□□ -0.66
TPM3-222ENST00000515609 RCOR1Q9UKL0 485 aa10.9□□□□□ -0.66
TPM3-222ENST00000515609 CNPY2Q9Y2B0 182 aa10.9□□□□□ -0.66
TPM3-222ENST00000515609 TMX2Q9Y320 296 aa10.9□□□□□ -0.66
TPM3-222ENST00000515609 ESYT2A0FGR8 921 aa10.89□□□□□ -0.67
TPM3-222ENST00000515609 USP17L5A8MUK1 530 aa10.89□□□□□ -0.67
TPM3-222ENST00000515609 RAD21O60216 631 aa10.89□□□□□ -0.67
TPM3-222ENST00000515609 PPP1R12BO60237 982 aaPredicted RBP10.89□□□□□ -0.67
TPM3-222ENST00000515609 PLA2G6O60733 806 aa10.89□□□□□ -0.67
TPM3-222ENST00000515609 FDX1P10109 184 aa10.89□□□□□ -0.67
TPM3-222ENST00000515609 BMP3P12645 472 aa10.89□□□□□ -0.67
TPM3-222ENST00000515609 YBX3P16989 372 aaKnown RBP eCLIP10.89□□□□□ -0.67
TPM3-222ENST00000515609 PRELPP51888 382 aa10.89□□□□□ -0.67
TPM3-222ENST00000515609 FOSBP53539 338 aa10.89□□□□□ -0.67
TPM3-222ENST00000515609 IKQ13123 557 aaPredicted RBP10.89□□□□□ -0.67
TPM3-222ENST00000515609 PKN1Q16512 942 aa10.89□□□□□ -0.67
TPM3-222ENST00000515609 FOXD4L6Q3SYB3 417 aaPredicted RBP10.89□□□□□ -0.67
TPM3-222ENST00000515609 ANGEL2Q5VTE6 544 aaKnown RBP10.89□□□□□ -0.67
TPM3-222ENST00000515609 USP17L2Q6R6M4 530 aa10.89□□□□□ -0.67
TPM3-222ENST00000515609 FOXD4L3Q6VB84 417 aaPredicted RBP10.89□□□□□ -0.67
TPM3-222ENST00000515609 HEATR3Q7Z4Q2 680 aa10.89□□□□□ -0.67
TPM3-222ENST00000515609 FAM160B2Q86V87 743 aa10.89□□□□□ -0.67
TPM3-222ENST00000515609 DAGLBQ8NCG7 672 aa10.89□□□□□ -0.67
TPM3-222ENST00000515609 LEO1Q8WVC0 666 aaPredicted RBP10.89□□□□□ -0.67
TPM3-222ENST00000515609 PCDHA4Q9UN74 947 aa10.89□□□□□ -0.67
TPM3-222ENST00000515609 MTMR7Q9Y216 660 aa10.89□□□□□ -0.67
TPM3-222ENST00000515609 MORC2Q9Y6X9 1032 aaPredicted RBP10.89□□□□□ -0.67
TPM3-222ENST00000515609 GREB1LQ9C091 1923 aaPredicted RBP10.88□□□□□ -0.67
TPM3-222ENST00000515609 CCDC194A0A1B0GVG4 234 aa10.88□□□□□ -0.67
TPM3-222ENST00000515609 GLTPD2A6NH11 291 aa10.88□□□□□ -0.67
TPM3-222ENST00000515609 FAM196BA6NMK8 535 aa10.88□□□□□ -0.67
TPM3-222ENST00000515609 ZBTB5O15062 677 aa10.88□□□□□ -0.67
TPM3-222ENST00000515609 DDNO94850 711 aaPredicted RBP10.88□□□□□ -0.67
TPM3-222ENST00000515609 GDF11O95390 407 aa10.88□□□□□ -0.67
TPM3-222ENST00000515609 ME1P48163 572 aa10.88□□□□□ -0.67
TPM3-222ENST00000515609 NASPP49321 788 aaPredicted RBP10.88□□□□□ -0.67
TPM3-222ENST00000515609 MRPL12P52815 198 aaKnown RBP10.88□□□□□ -0.67
TPM3-222ENST00000515609 NAPAP54920 295 aa10.88□□□□□ -0.67
TPM3-222ENST00000515609 ORC2Q13416 577 aaPredicted RBP10.88□□□□□ -0.67
TPM3-222ENST00000515609 ANO1Q5XXA6 986 aa10.88□□□□□ -0.67
TPM3-222ENST00000515609 CCDC73Q6ZRK6 1079 aa10.88□□□□□ -0.67
TPM3-222ENST00000515609 KRT25Q7Z3Z0 450 aa10.88□□□□□ -0.67
TPM3-222ENST00000515609 BLIDQ8IZY5 108 aa10.88□□□□□ -0.67
TPM3-222ENST00000515609 CMTR1Q8N1G2 835 aaKnown RBP10.88□□□□□ -0.67
TPM3-222ENST00000515609 STAG2Q8N3U4 1231 aa10.88□□□□□ -0.67
TPM3-222ENST00000515609 TEPSINQ96N21 525 aa10.88□□□□□ -0.67
TPM3-222ENST00000515609 FEZ1Q99689 392 aa10.88□□□□□ -0.67
TPM3-222ENST00000515609 NAP1L4Q99733 375 aaKnown RBP10.88□□□□□ -0.67
TPM3-222ENST00000515609 GGA3Q9NZ52 723 aa10.88□□□□□ -0.67
TPM3-222ENST00000515609 VPS54Q9P1Q0 977 aa10.88□□□□□ -0.67
TPM3-222ENST00000515609 TFIP11Q9UBB9 837 aaKnown RBP10.88□□□□□ -0.67
TPM3-222ENST00000515609 SBF1O95248 1867 aa10.87□□□□□ -0.67
TPM3-222ENST00000515609 TRIM75PA6NK02 468 aa10.87□□□□□ -0.67
TPM3-222ENST00000515609 BTBD18B2RXH4 712 aa10.87□□□□□ -0.67
TPM3-222ENST00000515609 C19orf81C9J6K1 198 aa10.87□□□□□ -0.67
TPM3-222ENST00000515609 SPTLC2O15270 562 aa10.87□□□□□ -0.67
TPM3-222ENST00000515609 PPFIA3O75145 1194 aa10.87□□□□□ -0.67
TPM3-222ENST00000515609 PPP6R2O75170 966 aa10.87□□□□□ -0.67
TPM3-222ENST00000515609 GOLGA8HP0CJ92 632 aa10.87□□□□□ -0.67
TPM3-222ENST00000515609 GUCY1A2P33402 732 aa10.87□□□□□ -0.67
TPM3-222ENST00000515609 EPS15P42566 896 aa10.87□□□□□ -0.67
TPM3-222ENST00000515609 STAT2P52630 851 aa10.87□□□□□ -0.67
TPM3-222ENST00000515609 GSE1Q14687 1217 aa10.87□□□□□ -0.67
TPM3-222ENST00000515609 SLC39A14Q15043 492 aa10.87□□□□□ -0.67
TPM3-222ENST00000515609 ADALQ6DHV7 355 aa10.87□□□□□ -0.67
TPM3-222ENST00000515609 BTNL9Q6UXG8 535 aa10.87□□□□□ -0.67
TPM3-222ENST00000515609 MIGA2Q7L4E1 593 aa10.87□□□□□ -0.67
TPM3-222ENST00000515609 RBM46Q8TBY0 533 aaKnown RBP10.87□□□□□ -0.67
TPM3-222ENST00000515609 KIAA1683Q9H0B3 1180 aa10.87□□□□□ -0.67
TPM3-222ENST00000515609 ZMYND12Q9H0C1 365 aa10.87□□□□□ -0.67
TPM3-222ENST00000515609 VCPKMTQ9H867 229 aa10.87□□□□□ -0.67
TPM3-222ENST00000515609 GPCPD1Q9NPB8 672 aa10.87□□□□□ -0.67
TPM3-222ENST00000515609 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.87□□□□□ -0.67
TPM3-222ENST00000515609 DDX19AQ9NUU7 478 aaKnown RBP10.87□□□□□ -0.67
TPM3-222ENST00000515609 PGAP2Q9UHJ9 254 aa10.87□□□□□ -0.67
TPM3-222ENST00000515609 FEM1BQ9UK73 627 aa10.87□□□□□ -0.67
TPM3-222ENST00000515609 MYH6P13533 1939 aa10.86□□□□□ -0.67
TPM3-222ENST00000515609 A0A1W2PQ27 194 aa10.86□□□□□ -0.67
TPM3-222ENST00000515609 A0A1W2PQ64 194 aa10.86□□□□□ -0.67
TPM3-222ENST00000515609 A0A1W2PQD8 194 aa10.86□□□□□ -0.67
TPM3-222ENST00000515609 UNCXA6NJT0 531 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms