RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 MLLT1Q03111 559 aaPredicted RBP15.13■□□□□ 0.01
CLCN3-210ENST00000515420 KLRC3Q07444 240 aa15.13■□□□□ 0.01
CLCN3-210ENST00000515420 FAM47AQ5JRC9 791 aa15.13■□□□□ 0.01
CLCN3-210ENST00000515420 AKNAD1Q5T1N1 836 aa15.13■□□□□ 0.01
CLCN3-210ENST00000515420 PLEKHH3Q7Z736 793 aa15.13■□□□□ 0.01
CLCN3-210ENST00000515420 TCP11L1Q9NUJ3 509 aa15.13■□□□□ 0.01
CLCN3-210ENST00000515420 CTNNA3Q9UI47 895 aa15.13■□□□□ 0.01
CLCN3-210ENST00000515420 BRCA2P51587 3418 aa15.13■□□□□ 0.01
CLCN3-210ENST00000515420 RANBP6O60518 1105 aaKnown RBP15.12■□□□□ 0.01
CLCN3-210ENST00000515420 PEX10O60683 326 aa15.12■□□□□ 0.01
CLCN3-210ENST00000515420 NDUFB10O96000 172 aa15.12■□□□□ 0.01
CLCN3-210ENST00000515420 CAPN2P17655 700 aa15.12■□□□□ 0.01
CLCN3-210ENST00000515420 CHMLP26374 656 aa15.12■□□□□ 0.01
CLCN3-210ENST00000515420 MORN1Q5T089 497 aa15.12■□□□□ 0.01
CLCN3-210ENST00000515420 FAM83BQ5T0W9 1011 aa15.12■□□□□ 0.01
CLCN3-210ENST00000515420 MFSD6Q6ZSS7 791 aa15.12■□□□□ 0.01
CLCN3-210ENST00000515420 TRMT44Q8IYL2 757 aaKnown RBP15.12■□□□□ 0.01
CLCN3-210ENST00000515420 USP6NLQ92738 828 aa15.12■□□□□ 0.01
CLCN3-210ENST00000515420 ATG4CQ96DT6 458 aa15.12■□□□□ 0.01
CLCN3-210ENST00000515420 NBPF3Q9H094 633 aa15.12■□□□□ 0.01
CLCN3-210ENST00000515420 SPATC1LQ9H0A9 340 aa15.12■□□□□ 0.01
CLCN3-210ENST00000515420 PPP1R9AQ9ULJ8 1098 aa15.12■□□□□ 0.01
CLCN3-210ENST00000515420 TACC3Q9Y6A5 838 aa15.12■□□□□ 0.01
CLCN3-210ENST00000515420 IVNS1ABPQ9Y6Y0 642 aa15.12■□□□□ 0.01
CLCN3-210ENST00000515420 SLC15A5A6NIM6 579 aa15.11■□□□□ 0.01
CLCN3-210ENST00000515420 ZNF213O14771 459 aa15.11■□□□□ 0.01
CLCN3-210ENST00000515420 STRNO43815 780 aa15.11■□□□□ 0.01
CLCN3-210ENST00000515420 RAD21O60216 631 aa15.11■□□□□ 0.01
CLCN3-210ENST00000515420 HMGCRP04035 888 aa15.11■□□□□ 0.01
CLCN3-210ENST00000515420 RGS2P41220 211 aa15.11■□□□□ 0.01
CLCN3-210ENST00000515420 NKX2-3Q8TAU0 364 aa15.11■□□□□ 0.01
CLCN3-210ENST00000515420 GMCL1Q96IK5 515 aa15.11■□□□□ 0.01
CLCN3-210ENST00000515420 APBA2Q99767 749 aa15.11■□□□□ 0.01
CLCN3-210ENST00000515420 SLF1Q9BQI6 1058 aa15.11■□□□□ 0.01
CLCN3-210ENST00000515420 MOV10L1Q9BXT6 1211 aaKnown RBP15.11■□□□□ 0.01
CLCN3-210ENST00000515420 CWC22Q9HCG8 908 aaKnown RBP15.11■□□□□ 0.01
CLCN3-210ENST00000515420 IL17RBQ9NRM6 502 aa15.11■□□□□ 0.01
CLCN3-210ENST00000515420 TOMM22Q9NS69 142 aa15.11■□□□□ 0.01
CLCN3-210ENST00000515420 BIN2Q9UBW5 565 aaPredicted RBP15.11■□□□□ 0.01
CLCN3-210ENST00000515420 POTEFA5A3E0 1075 aa15.1■□□□□ 0.01
CLCN3-210ENST00000515420 VWA5AO00534 786 aa15.1■□□□□ 0.01
CLCN3-210ENST00000515420 SLC25A27O95847 323 aa15.1■□□□□ 0.01
CLCN3-210ENST00000515420 NEFLP07196 543 aa15.1■□□□□ 0.01
CLCN3-210ENST00000515420 COPB2P35606 906 aa15.1■□□□□ 0.01
CLCN3-210ENST00000515420 HAND2P61296 217 aa15.1■□□□□ 0.01
CLCN3-210ENST00000515420 IMMTQ16891 758 aaKnown RBP15.1■□□□□ 0.01
CLCN3-210ENST00000515420 TBC1D10CQ8IV04 446 aa15.1■□□□□ 0.01
CLCN3-210ENST00000515420 PRPF38AQ8NAV1 312 aaKnown RBP15.1■□□□□ 0.01
CLCN3-210ENST00000515420 ESR2Q92731 530 aa15.1■□□□□ 0.01
CLCN3-210ENST00000515420 MROH8Q9H579 483 aa15.1■□□□□ 0.01
CLCN3-210ENST00000515420 INCENPQ9NQS7 918 aa15.1■□□□□ 0.01
CLCN3-210ENST00000515420 FEM1BQ9UK73 627 aa15.1■□□□□ 0.01
CLCN3-210ENST00000515420 STX8Q9UNK0 236 aa15.1■□□□□ 0.01
CLCN3-210ENST00000515420 PLA2G6O60733 806 aa15.09■□□□□ 0.01
CLCN3-210ENST00000515420 INHAP05111 366 aa15.09■□□□□ 0.01
CLCN3-210ENST00000515420 HOXC6P09630 235 aa15.09■□□□□ 0.01
CLCN3-210ENST00000515420 FDX1P10109 184 aa15.09■□□□□ 0.01
CLCN3-210ENST00000515420 ELNP15502 786 aa15.09■□□□□ 0.01
CLCN3-210ENST00000515420 PTPREP23469 700 aa15.09■□□□□ 0.01
CLCN3-210ENST00000515420 MAP2K5Q13163 448 aa15.09■□□□□ 0.01
CLCN3-210ENST00000515420 GRB14Q14449 540 aa15.09■□□□□ 0.01
CLCN3-210ENST00000515420 MTFR1Q15390 333 aa15.09■□□□□ 0.01
CLCN3-210ENST00000515420 CCDC178Q5BJE1 867 aa15.09■□□□□ 0.01
CLCN3-210ENST00000515420 BMP2KLQ5H9B9 411 aa15.09■□□□□ 0.01
CLCN3-210ENST00000515420 RIOX2Q8IUF8 465 aa15.09■□□□□ 0.01
CLCN3-210ENST00000515420 ABRAQ8N0Z2 381 aa15.09■□□□□ 0.01
CLCN3-210ENST00000515420 LRRC47Q8N1G4 583 aaKnown RBP15.09■□□□□ 0.01
CLCN3-210ENST00000515420 TTC14Q96N46 770 aa15.09■□□□□ 0.01
CLCN3-210ENST00000515420 IL25Q9H293 177 aa15.09■□□□□ 0.01
CLCN3-210ENST00000515420 FBXO28Q9NVF7 368 aa15.09■□□□□ 0.01
CLCN3-210ENST00000515420 ATP2A1O14983 1001 aa15.08■□□□□ 0
CLCN3-210ENST00000515420 SGSM2O43147 1006 aa15.08■□□□□ 0
CLCN3-210ENST00000515420 NMT2O60551 498 aa15.08■□□□□ 0
CLCN3-210ENST00000515420 GJB1P08034 283 aa15.08■□□□□ 0
CLCN3-210ENST00000515420 BMP3P12645 472 aa15.08■□□□□ 0
CLCN3-210ENST00000515420 CCL5P13501 91 aa15.08■□□□□ 0
CLCN3-210ENST00000515420 ERCC3P19447 782 aa15.08■□□□□ 0
CLCN3-210ENST00000515420 TMEM132BQ14DG7 1078 aa15.08■□□□□ 0
CLCN3-210ENST00000515420 RRP12Q5JTH9 1297 aaKnown RBP15.08■□□□□ 0
CLCN3-210ENST00000515420 SLFN13Q68D06 897 aa15.08■□□□□ 0
CLCN3-210ENST00000515420 REPS2Q8NFH8 660 aa15.08■□□□□ 0
CLCN3-210ENST00000515420 CCDC136Q96JN2 1154 aa15.08■□□□□ 0
CLCN3-210ENST00000515420 NUP88Q99567 741 aaPredicted RBP15.08■□□□□ 0
CLCN3-210ENST00000515420 RNF208Q9H0X6 261 aa15.08■□□□□ 0
CLCN3-210ENST00000515420 CNNM2Q9H8M5 875 aa15.08■□□□□ 0
CLCN3-210ENST00000515420 ZNF214Q9UL59 606 aaPredicted RBP15.08■□□□□ 0
CLCN3-210ENST00000515420 NEDD4P46934 1319 aa15.08■□□□□ 0
CLCN3-210ENST00000515420 ZNFX1Q9P2E3 1918 aaKnown RBP15.07■□□□□ 0
CLCN3-210ENST00000515420 TNRC18O15417 2968 aaPredicted RBP15.07■□□□□ 0
CLCN3-210ENST00000515420 TOP1P11387 765 aaKnown RBP15.07■□□□□ 0
CLCN3-210ENST00000515420 ZKSCAN1P17029 563 aaPredicted RBP15.07■□□□□ 0
CLCN3-210ENST00000515420 CYP2B6P20813 491 aa15.07■□□□□ 0
CLCN3-210ENST00000515420 SLC1A4P43007 532 aa15.07■□□□□ 0
CLCN3-210ENST00000515420 GJA8P48165 433 aa15.07■□□□□ 0
CLCN3-210ENST00000515420 STAT2P52630 851 aa15.07■□□□□ 0
CLCN3-210ENST00000515420 OAZ1P54368 228 aa15.07■□□□□ 0
CLCN3-210ENST00000515420 PLS1Q14651 629 aa15.07■□□□□ 0
CLCN3-210ENST00000515420 WDR78Q5VTH9 848 aa15.07■□□□□ 0
CLCN3-210ENST00000515420 FAM160B2Q86V87 743 aa15.07■□□□□ 0
CLCN3-210ENST00000515420 CHURC1Q8WUH1 139 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms