RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 MYH6P13533 1939 aa13.99□□□□□ -0.17
PDLIM5-220ENST00000514830 TESPA1A2RU30 521 aaPredicted RBP13.98□□□□□ -0.17
PDLIM5-220ENST00000514830 PALM3A6NDB9 673 aaPredicted RBP13.98□□□□□ -0.17
PDLIM5-220ENST00000514830 TRIM75PA6NK02 468 aa13.98□□□□□ -0.17
PDLIM5-220ENST00000514830 FAM155AB1AL88 458 aaPredicted RBP13.98□□□□□ -0.17
PDLIM5-220ENST00000514830 CA12O43570 354 aa13.98□□□□□ -0.17
PDLIM5-220ENST00000514830 CD2BP2O95400 341 aaKnown RBP13.98□□□□□ -0.17
PDLIM5-220ENST00000514830 HSPA8P11142 646 aaKnown RBP13.98□□□□□ -0.17
PDLIM5-220ENST00000514830 SMARCA1P28370 1054 aa13.98□□□□□ -0.17
PDLIM5-220ENST00000514830 KIF5BP33176 963 aa13.98□□□□□ -0.17
PDLIM5-220ENST00000514830 ZNF157P51786 506 aaPredicted RBP13.98□□□□□ -0.17
PDLIM5-220ENST00000514830 ATP2B2Q01814 1243 aa13.98□□□□□ -0.17
PDLIM5-220ENST00000514830 MLLT1Q03111 559 aaPredicted RBP13.98□□□□□ -0.17
PDLIM5-220ENST00000514830 MOGSQ13724 837 aa13.98□□□□□ -0.17
PDLIM5-220ENST00000514830 SLFN13Q68D06 897 aa13.98□□□□□ -0.17
PDLIM5-220ENST00000514830 FASTKD5Q7L8L6 764 aaKnown RBP13.98□□□□□ -0.17
PDLIM5-220ENST00000514830 FANCBQ8NB91 859 aa13.98□□□□□ -0.17
PDLIM5-220ENST00000514830 MS4A4AQ96JQ5 239 aa13.98□□□□□ -0.17
PDLIM5-220ENST00000514830 TSHZ2Q9NRE2 1034 aa13.98□□□□□ -0.17
PDLIM5-220ENST00000514830 RBM28Q9NW13 759 aaKnown RBP13.98□□□□□ -0.17
PDLIM5-220ENST00000514830 A0A0G2JMZ2 1700 aa13.98□□□□□ -0.17
PDLIM5-220ENST00000514830 CCDC196A0A1B0GTZ2 297 aa13.97□□□□□ -0.17
PDLIM5-220ENST00000514830 CCDC85CA6NKD9 419 aa13.97□□□□□ -0.17
PDLIM5-220ENST00000514830 GOLGA8BA8MQT2 603 aa13.97□□□□□ -0.17
PDLIM5-220ENST00000514830 CETPP11597 493 aa13.97□□□□□ -0.17
PDLIM5-220ENST00000514830 HOXA7P31268 230 aaPredicted RBP13.97□□□□□ -0.17
PDLIM5-220ENST00000514830 MAP2K2P36507 400 aa13.97□□□□□ -0.17
PDLIM5-220ENST00000514830 GNAQP50148 359 aa13.97□□□□□ -0.17
PDLIM5-220ENST00000514830 INHBEP58166 350 aa13.97□□□□□ -0.17
PDLIM5-220ENST00000514830 ZNF543Q08ER8 600 aa13.97□□□□□ -0.17
PDLIM5-220ENST00000514830 GRM1Q13255 1194 aa13.97□□□□□ -0.17
PDLIM5-220ENST00000514830 ME3Q16798 604 aa13.97□□□□□ -0.17
PDLIM5-220ENST00000514830 KIAA1755Q5JYT7 1200 aa13.97□□□□□ -0.17
PDLIM5-220ENST00000514830 BTNL9Q6UXG8 535 aa13.97□□□□□ -0.17
PDLIM5-220ENST00000514830 CAPNS2Q96L46 248 aa13.97□□□□□ -0.17
PDLIM5-220ENST00000514830 LZTS2Q9BRK4 669 aa13.97□□□□□ -0.17
PDLIM5-220ENST00000514830 ZCCHC17Q9NP64 241 aaKnown RBP13.97□□□□□ -0.17
PDLIM5-220ENST00000514830 TMOD4Q9NZQ9 345 aa13.97□□□□□ -0.17
PDLIM5-220ENST00000514830 MAD2L2Q9UI95 211 aa13.97□□□□□ -0.17
PDLIM5-220ENST00000514830 SLC45A1Q9Y2W3 748 aa13.97□□□□□ -0.17
PDLIM5-220ENST00000514830 MYPNQ86TC9 1320 aa13.96□□□□□ -0.17
PDLIM5-220ENST00000514830 MANSC4A6NHS7 340 aaPredicted RBP13.96□□□□□ -0.17
PDLIM5-220ENST00000514830 DHX16O60231 1041 aaKnown RBP13.96□□□□□ -0.17
PDLIM5-220ENST00000514830 PARP1P09874 1014 aaKnown RBP13.96□□□□□ -0.17
PDLIM5-220ENST00000514830 BMP3P12645 472 aa13.96□□□□□ -0.17
PDLIM5-220ENST00000514830 VCAM1P19320 739 aa13.96□□□□□ -0.17
PDLIM5-220ENST00000514830 SLC1A4P43007 532 aa13.96□□□□□ -0.17
PDLIM5-220ENST00000514830 METAP2P50579 478 aaKnown RBP eCLIP13.96□□□□□ -0.17
PDLIM5-220ENST00000514830 HMGCS2P54868 508 aa13.96□□□□□ -0.17
PDLIM5-220ENST00000514830 RTN1Q16799 776 aa13.96□□□□□ -0.17
PDLIM5-220ENST00000514830 MICU3Q86XE3 530 aa13.96□□□□□ -0.17
PDLIM5-220ENST00000514830 REM2Q8IYK8 340 aaPredicted RBP13.96□□□□□ -0.17
PDLIM5-220ENST00000514830 CTCFLQ8NI51 663 aaPredicted RBP13.96□□□□□ -0.17
PDLIM5-220ENST00000514830 GTF3C6Q969F1 213 aa13.96□□□□□ -0.17
PDLIM5-220ENST00000514830 SLKQ9H2G2 1235 aaPredicted RBP13.96□□□□□ -0.17
PDLIM5-220ENST00000514830 FAM217BQ9NTX9 383 aaPredicted RBP13.96□□□□□ -0.17
PDLIM5-220ENST00000514830 GOLGA8AA7E2F4 631 aa13.95□□□□□ -0.18
PDLIM5-220ENST00000514830 K7ELQ4 463 aaPredicted RBP13.95□□□□□ -0.18
PDLIM5-220ENST00000514830 CUL4AQ13619 759 aa13.95□□□□□ -0.18
PDLIM5-220ENST00000514830 TMTC3Q6ZXV5 915 aa13.95□□□□□ -0.18
PDLIM5-220ENST00000514830 TMX3Q96JJ7 454 aa13.95□□□□□ -0.18
PDLIM5-220ENST00000514830 MYL10Q9BUA6 226 aa13.95□□□□□ -0.18
PDLIM5-220ENST00000514830 SPZ1Q9BXG8 430 aa13.95□□□□□ -0.18
PDLIM5-220ENST00000514830 FEM1BQ9UK73 627 aa13.95□□□□□ -0.18
PDLIM5-220ENST00000514830 AGTPBP1Q9UPW5 1226 aa13.95□□□□□ -0.18
PDLIM5-220ENST00000514830 USP17L15C9J2P7 530 aa13.94□□□□□ -0.18
PDLIM5-220ENST00000514830 USP17L13C9JLJ4 530 aa13.94□□□□□ -0.18
PDLIM5-220ENST00000514830 USP17L11C9JVI0 530 aa13.94□□□□□ -0.18
PDLIM5-220ENST00000514830 USP17L18D6R9N7 530 aa13.94□□□□□ -0.18
PDLIM5-220ENST00000514830 USP17L22D6RA61 530 aa13.94□□□□□ -0.18
PDLIM5-220ENST00000514830 USP17L17D6RBQ6 530 aa13.94□□□□□ -0.18
PDLIM5-220ENST00000514830 USP17L19D6RCP7 530 aa13.94□□□□□ -0.18
PDLIM5-220ENST00000514830 USP17L20D6RJB6 530 aa13.94□□□□□ -0.18
PDLIM5-220ENST00000514830 LARGE1O95461 756 aa13.94□□□□□ -0.18
PDLIM5-220ENST00000514830 FDX1P10109 184 aa13.94□□□□□ -0.18
PDLIM5-220ENST00000514830 IFNAR1P17181 557 aa13.94□□□□□ -0.18
PDLIM5-220ENST00000514830 CDC27P30260 824 aa13.94□□□□□ -0.18
PDLIM5-220ENST00000514830 USP17L24Q0WX57 530 aa13.94□□□□□ -0.18
PDLIM5-220ENST00000514830 FUT2Q10981 343 aa13.94□□□□□ -0.18
PDLIM5-220ENST00000514830 SCRN1Q12765 414 aa13.94□□□□□ -0.18
PDLIM5-220ENST00000514830 NOGQ13253 232 aa13.94□□□□□ -0.18
PDLIM5-220ENST00000514830 PABPC4Q13310 644 aaKnown RBP eCLIP13.94□□□□□ -0.18
PDLIM5-220ENST00000514830 NTRK3Q16288 839 aa13.94□□□□□ -0.18
PDLIM5-220ENST00000514830 GPAT2Q6NUI2 795 aa13.94□□□□□ -0.18
PDLIM5-220ENST00000514830 CATSPERGQ6ZRH7 1159 aa13.94□□□□□ -0.18
PDLIM5-220ENST00000514830 ANKRD23Q86SG2 305 aa13.94□□□□□ -0.18
PDLIM5-220ENST00000514830 FAM160B2Q86V87 743 aa13.94□□□□□ -0.18
PDLIM5-220ENST00000514830 HSCBQ8IWL3 235 aa13.94□□□□□ -0.18
PDLIM5-220ENST00000514830 CHURC1Q8WUH1 139 aa13.94□□□□□ -0.18
PDLIM5-220ENST00000514830 NUP133Q8WUM0 1156 aa13.94□□□□□ -0.18
PDLIM5-220ENST00000514830 LLPHQ9BRT6 129 aaKnown RBP13.94□□□□□ -0.18
PDLIM5-220ENST00000514830 COL11A1P12107 1806 aaPredicted RBP13.94□□□□□ -0.18
PDLIM5-220ENST00000514830 KLRF2D3W0D1 207 aa13.93□□□□□ -0.18
PDLIM5-220ENST00000514830 CDKL5O76039 1030 aa13.93□□□□□ -0.18
PDLIM5-220ENST00000514830 SLC34A2O95436 690 aa13.93□□□□□ -0.18
PDLIM5-220ENST00000514830 TM4SF4P48230 202 aa13.93□□□□□ -0.18
PDLIM5-220ENST00000514830 STAT2P52630 851 aa13.93□□□□□ -0.18
PDLIM5-220ENST00000514830 ST3GAL1Q11201 340 aa13.93□□□□□ -0.18
PDLIM5-220ENST00000514830 ZYXQ15942 572 aaKnown RBP13.93□□□□□ -0.18
PDLIM5-220ENST00000514830 FAM83BQ5T0W9 1011 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms