RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	NR0B2	Q15466	257 aa		5.17	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	SEZ6	Q53EL9	994 aa		5.17	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	ZNF394	Q53GI3	561 aa		5.17	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	ARSH	Q5FYA8	562 aa		5.17	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	INTS3	Q68E01	1043 aa	Known RBP	5.17	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	ANKS4B	Q8N8V4	417 aa		5.17	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	DAGLB	Q8NCG7	672 aa		5.17	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	ABHD4	Q8TB40	342 aa		5.17	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	SMARCC1	Q92922	1105 aa	Predicted RBP	5.17	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	KIF2C	Q99661	725 aa		5.17	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	CWC22	Q9HCG8	908 aa	Known RBP	5.17	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	COPRS	Q9NQ92	184 aa		5.17	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	PRDM7	Q9NQW5	492 aa		5.17	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	ADAMTS1	Q9UHI8	967 aa		5.17	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	TNFRSF10C	O14798	259 aa		5.16	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	HSP90B1	P14625	803 aa	Known RBP	5.16	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	RBL2	Q08999	1139 aa		5.16	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	OVOS1	Q6IE37	1185 aa		5.16	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	NOP9	Q86U38	636 aa	Known RBP	5.16	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	FBXO27	Q8NI29	283 aa		5.16	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	BAHD1	Q8TBE0	780 aa	Predicted RBP	5.16	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	MYLIP	Q8WY64	445 aa		5.16	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	TM9SF2	Q99805	663 aa		5.16	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	HIRIP3	Q9BW71	556 aa	Predicted RBP	5.16	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	SLC6A17	Q9H1V8	727 aa		5.16	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	5.16	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	CNTNAP4	Q9C0A0	1308 aa		5.16	□□□□□ -1.58
CALCOCO2-223	ENST00000514267	KRTAP9-6	A0A140TA67	174 aa		5.15	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	SSU72P8	A0A1W2PR75	194 aa		5.15	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	C8A	P07357	584 aa		5.15	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	NME1	P15531	152 aa	Known RBP	5.15	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	DNAJA1	P31689	397 aa	Known RBP	5.15	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	PCBP3	P57721	371 aa	Known RBP	5.15	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	KRTAP19-4	Q3LI73	84 aa		5.15	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	BBS9	Q3SYG4	887 aa		5.15	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	GK5	Q6ZS86	529 aa		5.15	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	DPH6	Q7L8W6	267 aa		5.15	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	UBP1	Q9NZI7	540 aa		5.15	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	ZNRF3	Q9ULT6	936 aa		5.15	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	PCDHGB7	Q9Y5F8	929 aa		5.15	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	SLC12A7	Q9Y666	1083 aa		5.15	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	SIGLEC6	O43699	453 aa		5.14	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	TSPAN15	O95858	294 aa		5.14	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	LCE3B	Q5TA77	95 aa		5.14	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	NBPF12	Q5TAG4	269 aa	Predicted RBP	5.14	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	IRF2BP1	Q8IU81	584 aa		5.14	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	FBXO15	Q8NCQ5	510 aa	Predicted RBP	5.14	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	OR6P1	Q8NGX9	317 aa		5.14	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	RASGRP4	Q8TDF6	673 aa		5.14	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	GPRASP2	Q96D09	838 aa		5.14	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	VWCE	Q96DN2	955 aa		5.14	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	ATG4C	Q96DT6	458 aa		5.14	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	FERD3L	Q96RJ6	166 aa		5.14	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	EPB41L4B	Q9H329	900 aa		5.14	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	PCDHB12	Q9Y5F1	795 aa		5.14	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	PCDHA11	Q9Y5I1	949 aa		5.14	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	CADPS	Q9ULU8	1353 aa		5.14	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	ZNF503-AS2	A6NEH8	195 aa		5.13	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	DBX1	A6NMT0	343 aa		5.13	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	SMARCA5	O60264	1052 aa	Predicted RBP	5.13	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	UBOX5	O94941	541 aa		5.13	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	FGR	P09769	529 aa		5.13	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	ATF4	P18848	351 aa	Predicted RBP	5.13	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	GTF2F1	P35269	517 aa	Known RBP eCLIP	5.13	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	KIR2DL1	P43626	348 aa	Predicted RBP	5.13	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	KIR2DL2	P43627	348 aa	Predicted RBP	5.13	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	CRK	P46108	304 aa		5.13	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	MLANA	Q16655	118 aa		5.13	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	NBPF9	Q3BBW0	867 aa		5.13	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	OLFML2B	Q68BL8	750 aa		5.13	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	RBBP8NL	Q8NC74	664 aa	Predicted RBP	5.13	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	LINC00116	Q8NCU8	138 aa		5.13	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	SEC16B	Q96JE7	1060 aa		5.13	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	SLC26A8	Q96RN1	970 aa		5.13	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	HDAC8	Q9BY41	377 aa		5.13	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	MKRN2	Q9H000	416 aa	Known RBP	5.13	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	C19orf73	Q9NVV2	129 aa		5.13	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	DNAJC25-GNG10	A0A024R161	153 aa		5.12	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	HRK	O00198	91 aa		5.12	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	DNAJA2	O60884	412 aa		5.12	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	ZGLP1	P0C6A0	271 aa		5.12	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	HK2	P52789	917 aa		5.12	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	TEK	Q02763	1124 aa		5.12	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	CLC	Q05315	142 aa		5.12	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	PAK2	Q13177	524 aa		5.12	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	NBPF6	Q5VWK0	638 aa		5.12	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	MCF2L2	Q86YR7	1114 aa		5.12	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	KRTAP19-1	Q8IUB9	90 aa		5.12	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	NBPF4	Q96M43	638 aa		5.12	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	TOX2	Q96NM4	488 aa		5.12	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	CRBN	Q96SW2	442 aa		5.12	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	DNAJC2	Q99543	621 aa	Known RBP	5.12	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	LNPK	Q9C0E8	428 aa		5.12	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	SUCO	Q9UBS9	1254 aa	Known RBP	5.12	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	NFIB	O00712	420 aa		5.11	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	STK10	O94804	968 aa	Known RBP	5.11	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	RAP1GAP	P47736	663 aa		5.11	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	RALGPS1	Q5JS13	557 aa		5.11	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	EAF1	Q96JC9	268 aa	Predicted RBP	5.11	□□□□□ -1.59
CALCOCO2-223	ENST00000514267	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	5.11	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms